Wall clock time and date at job start Thu Mar 4 2021 13:15:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53000 * 109.47496 * 2 1 4 4 C 1.53000 * 109.46720 * 239.99952 * 2 1 3 5 5 O 1.45205 * 109.47301 * 120.00340 * 2 1 3 6 6 C 1.34635 * 116.99777 * 59.99490 * 5 2 1 7 7 O 1.21507 * 120.00321 * 0.02562 * 6 5 2 8 8 N 1.34781 * 119.99507 * 180.02562 * 6 5 2 9 9 C 1.46500 * 119.99811 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.47291 * 180.02562 * 9 8 6 11 11 H 1.09003 * 112.85277 * 43.79715 * 10 9 8 12 12 C 1.53775 * 113.61637 * 174.99910 * 10 9 8 13 13 C 1.53786 * 87.08217 * 89.19864 * 12 10 9 14 14 F 1.39896 * 113.61187 * 270.79963 * 13 12 10 15 15 C 1.53000 * 113.61366 * 139.97877 * 13 12 10 16 16 N 1.46499 * 109.46840 * 181.52762 * 15 13 12 17 17 C 1.38408 * 119.99924 * 179.97438 * 16 15 13 18 18 N 1.32489 * 119.21620 * 359.73928 * 17 16 15 19 19 C 1.32281 * 120.74113 * 179.71630 * 18 17 16 20 20 C 1.38609 * 119.19298 * 0.53834 * 19 18 17 21 21 C 1.50705 * 120.71850 * 179.75278 * 20 19 18 22 22 O 1.42898 * 109.46660 * 119.98044 * 21 20 19 23 23 Si 1.86297 * 109.47089 * 359.97438 * 21 20 19 24 24 C 1.38607 * 118.55889 * 359.73634 * 20 19 18 25 25 N 1.32273 * 119.19831 * 359.97438 * 24 20 19 26 26 C 1.53779 * 87.16949 * 25.39017 * 13 12 10 27 27 H 1.09004 * 109.47211 * 299.99850 * 1 2 3 28 28 H 1.08994 * 109.47391 * 59.99697 * 1 2 3 29 29 H 1.09003 * 109.47207 * 180.02562 * 1 2 3 30 30 H 1.08990 * 109.47128 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.46721 * 300.00370 * 3 2 1 32 32 H 1.09004 * 109.46768 * 59.99879 * 3 2 1 33 33 H 1.08994 * 109.47416 * 299.99865 * 4 2 1 34 34 H 1.09007 * 109.47178 * 60.00310 * 4 2 1 35 35 H 1.09006 * 109.46979 * 180.02562 * 4 2 1 36 36 H 0.96997 * 119.99952 * 0.02562 * 8 6 5 37 37 H 1.08996 * 109.47527 * 60.00113 * 9 8 6 38 38 H 1.09004 * 109.47087 * 299.99852 * 9 8 6 39 39 H 1.08998 * 113.61685 * 334.65081 * 12 10 9 40 40 H 1.09005 * 113.68791 * 203.75638 * 12 10 9 41 41 H 1.09002 * 109.47398 * 301.53088 * 15 13 12 42 42 H 1.09001 * 109.47194 * 61.53269 * 15 13 12 43 43 H 0.97000 * 120.00420 * 0.02562 * 16 15 13 44 44 H 1.07996 * 120.40618 * 180.24664 * 19 18 17 45 45 H 1.09005 * 109.46952 * 239.98032 * 21 20 19 46 46 H 0.96697 * 113.99967 * 299.99735 * 22 21 20 47 47 H 1.48503 * 110.00114 * 58.67918 * 23 21 20 48 48 H 1.48506 * 109.99979 * 180.02562 * 23 21 20 49 49 H 1.08000 * 120.39828 * 180.02562 * 24 20 19 50 50 H 1.09001 * 113.61704 * 89.16457 * 26 13 12 51 51 H 1.09000 * 113.61254 * 220.06087 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3383 7 8 0.9515 -2.5097 0.5036 8 7 2.0672 -2.6655 2.4171 9 6 1.6740 -4.0669 2.5831 10 6 2.2730 -4.6146 3.8800 11 1 2.1774 -3.9217 4.7161 12 6 1.8199 -6.0462 4.2115 13 6 3.0245 -6.5338 3.3891 14 9 2.7413 -6.7089 2.0303 15 6 3.7417 -7.7360 4.0064 16 7 4.8900 -8.1003 3.1727 17 6 5.6966 -9.1657 3.5333 18 7 5.4191 -9.8421 4.6382 19 6 6.1665 -10.8689 5.0082 20 6 7.2567 -11.2265 4.2305 21 6 8.1346 -12.3869 4.6228 22 8 8.1173 -13.3693 3.5852 23 14 7.4979 -13.1410 6.2028 24 6 7.5216 -10.4940 3.0840 25 7 6.7308 -9.4819 2.7678 26 6 3.6923 -5.1864 3.7105 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 3.1300 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6766 -1.7489 -1.2493 34 1 1.6765 -0.2074 -2.1393 35 1 3.1299 -0.7217 -1.2491 36 1 2.6263 -2.2364 3.0836 37 1 2.0411 -4.6498 1.7384 38 1 0.5871 -4.1365 2.6275 39 1 0.8571 -6.3116 3.7749 40 1 1.8864 -6.2923 5.2713 41 1 4.0868 -7.4785 5.0077 42 1 3.0533 -8.5791 4.0649 43 1 5.0855 -7.5945 2.3685 44 1 5.9330 -11.4189 5.9078 45 1 9.1554 -12.0355 4.7735 46 1 7.2389 -13.7270 3.3968 47 1 6.0959 -13.5952 6.0200 48 1 8.3555 -14.2862 6.6008 49 1 8.3631 -10.7471 2.4561 50 1 4.2725 -5.1956 4.6332 51 1 4.2389 -4.7585 2.8701 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16498494_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:28 Heat of formation + Delta-G solvation = -71.869248 kcal Electronic energy + Delta-G solvation = -33249.242696 eV Core-core repulsion = 28487.369404 eV Total energy + Delta-G solvation = -4761.873292 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.190 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.89980 -42.10828 -41.85339 -39.99281 -38.43112 -38.17044 -36.79978 -35.70215 -34.79339 -34.73513 -32.74443 -30.02563 -28.40451 -28.32973 -27.63611 -27.02210 -26.14001 -25.67441 -23.52868 -23.09099 -22.77120 -21.27144 -20.28393 -19.54934 -19.07565 -18.75209 -18.23829 -17.81804 -17.43846 -17.11043 -17.07750 -16.62744 -16.43471 -16.17433 -16.05833 -15.79498 -15.73371 -15.59908 -15.43292 -15.16322 -14.82901 -14.56219 -14.52668 -14.28796 -14.16636 -14.03314 -13.69313 -13.37646 -13.25349 -13.17261 -13.04567 -12.94969 -12.89738 -12.56353 -12.42304 -12.31194 -12.26725 -12.08649 -11.93745 -11.75866 -11.51766 -11.43475 -11.31809 -11.23716 -11.09635 -10.70182 -10.25863 -10.09003 -9.16094 -4.90780 0.02728 0.11772 1.11487 1.32441 1.61948 1.71076 1.72028 1.99781 2.76480 3.02370 3.07409 3.15696 3.21064 3.35138 3.41671 3.43264 3.58116 3.65864 3.70523 3.71321 3.76298 3.79514 3.91312 3.97889 4.23080 4.32338 4.43556 4.50843 4.56402 4.57855 4.59732 4.65003 4.69561 4.70697 4.72949 4.73078 4.76383 4.81750 4.84816 4.89429 4.95135 5.00666 5.09853 5.18106 5.22900 5.23614 5.29862 5.32867 5.55408 5.69141 5.94979 6.30863 6.35172 6.48479 7.21447 7.29905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.181 4.181 5 O -0.368 6.368 6 C 0.641 3.359 7 O -0.597 6.597 8 N -0.696 5.696 9 C 0.147 3.853 10 C -0.115 4.115 11 H 0.123 0.877 12 C -0.127 4.127 13 C 0.067 3.933 14 F -0.203 7.203 15 C 0.135 3.865 16 N -0.694 5.694 17 C 0.552 3.448 18 N -0.573 5.573 19 C 0.195 3.805 20 C -0.284 4.284 21 C -0.058 4.058 22 O -0.548 6.548 23 Si 0.764 3.236 24 C 0.212 3.788 25 N -0.593 5.593 26 C -0.142 4.142 27 H 0.064 0.936 28 H 0.087 0.913 29 H 0.061 0.939 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.071 0.929 33 H 0.061 0.939 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.419 0.581 37 H 0.061 0.939 38 H 0.067 0.933 39 H 0.084 0.916 40 H 0.139 0.861 41 H 0.106 0.894 42 H 0.072 0.928 43 H 0.415 0.585 44 H 0.191 0.809 45 H 0.132 0.868 46 H 0.385 0.615 47 H -0.280 1.280 48 H -0.300 1.300 49 H 0.181 0.819 50 H 0.128 0.872 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.056 3.214 7.453 8.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.238 4.238 5 O -0.283 6.283 6 C 0.394 3.606 7 O -0.488 6.488 8 N -0.357 5.357 9 C 0.025 3.975 10 C -0.134 4.134 11 H 0.141 0.859 12 C -0.166 4.166 13 C 0.048 3.952 14 F -0.184 7.184 15 C 0.011 3.989 16 N -0.331 5.331 17 C 0.196 3.804 18 N -0.296 5.296 19 C 0.029 3.971 20 C -0.292 4.292 21 C -0.169 4.169 22 O -0.356 6.356 23 Si 0.669 3.331 24 C 0.045 3.955 25 N -0.315 5.315 26 C -0.179 4.179 27 H 0.083 0.917 28 H 0.106 0.894 29 H 0.080 0.920 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.090 0.910 33 H 0.079 0.921 34 H 0.106 0.894 35 H 0.080 0.920 36 H 0.256 0.744 37 H 0.079 0.921 38 H 0.086 0.914 39 H 0.103 0.897 40 H 0.157 0.843 41 H 0.124 0.876 42 H 0.090 0.910 43 H 0.253 0.747 44 H 0.207 0.793 45 H 0.150 0.850 46 H 0.234 0.766 47 H -0.207 1.207 48 H -0.228 1.228 49 H 0.198 0.802 50 H 0.147 0.853 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.232 3.305 7.179 7.907 hybrid contribution 0.274 -1.143 -1.557 1.951 sum 0.506 2.162 5.622 6.045 Atomic orbital electron populations 1.22472 0.94019 1.03612 1.03612 1.22361 0.94500 0.92637 0.81437 1.21888 1.02463 0.90715 1.04330 1.22480 1.01624 1.02161 0.97531 1.86306 1.71530 1.23170 1.47256 1.18373 0.78824 0.80851 0.82528 1.90916 1.42405 1.71072 1.44404 1.44637 1.55342 1.12552 1.23160 1.21270 0.99800 0.78416 0.98002 1.22500 0.95811 0.97981 0.97111 0.85874 1.23581 0.96949 0.93216 1.02817 1.22491 0.99455 0.95984 0.77264 1.92844 1.94600 1.96396 1.34547 1.21850 0.86098 0.96097 0.94894 1.44053 1.28778 1.30814 1.29439 1.19570 0.86827 0.87810 0.86239 1.67959 1.33433 1.11107 1.17115 1.23218 0.87375 0.89512 0.97042 1.21719 1.02304 1.04267 1.00891 1.24910 1.04304 0.87727 0.99922 1.86586 1.35846 1.57499 1.55629 0.94310 0.76247 0.83420 0.79162 1.23133 0.94396 0.85528 0.92451 1.67985 1.07895 1.21290 1.34350 1.23768 0.96869 0.92713 1.04592 0.91746 0.89441 0.91975 0.91165 0.88312 0.91005 0.92053 0.89402 0.91965 0.74433 0.92090 0.91439 0.89705 0.84269 0.87573 0.91000 0.74709 0.79274 0.85032 0.76567 1.20704 1.22800 0.80191 0.85349 0.90777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.71 8.37 71.98 0.60 -0.11 16 2 C 0.13 0.47 1.13 -10.79 -0.01 0.46 16 3 C -0.14 0.24 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.82 8.37 71.98 0.60 -0.22 16 5 O -0.37 -2.24 9.94 -55.45 -0.55 -2.79 16 6 C 0.64 4.98 8.06 129.79 1.05 6.03 16 7 O -0.60 -8.36 11.88 19.82 0.24 -8.13 16 8 N -0.70 -0.38 5.56 -590.85 -3.29 -3.66 16 9 C 0.15 -0.08 5.28 86.38 0.46 0.37 16 10 C -0.12 0.93 3.94 -10.21 -0.04 0.89 16 11 H 0.12 -1.49 8.14 -2.39 -0.02 -1.51 16 12 C -0.13 1.09 7.13 31.12 0.22 1.31 16 13 C 0.07 -0.29 1.63 -10.27 -0.02 -0.31 16 14 F -0.20 -0.69 15.08 44.97 0.68 -0.01 16 15 C 0.13 -0.45 5.32 86.38 0.46 0.00 16 16 N -0.69 -1.13 5.62 -351.04 -1.97 -3.11 16 17 C 0.55 2.84 8.43 261.49 2.20 5.04 16 18 N -0.57 -1.83 9.59 -197.98 -1.90 -3.73 16 19 C 0.20 -0.18 9.92 84.71 0.84 0.66 16 20 C -0.28 0.33 5.40 -19.69 -0.11 0.22 16 21 C -0.06 0.21 2.85 71.24 0.20 0.41 16 22 O -0.55 0.02 12.79 -148.98 -1.91 -1.89 16 23 Si 0.76 -3.80 29.87 68.60 2.05 -1.75 16 24 C 0.21 0.46 10.92 84.71 0.93 1.38 16 25 N -0.59 -3.77 10.46 -197.99 -2.07 -5.84 16 26 C -0.14 1.08 7.08 31.18 0.22 1.31 16 27 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 28 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 29 H 0.06 0.60 5.88 -2.39 -0.01 0.59 16 30 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 31 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 32 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 33 H 0.06 0.64 5.88 -2.39 -0.01 0.62 16 34 H 0.09 0.08 8.14 -2.38 -0.02 0.06 16 35 H 0.06 0.24 8.14 -2.38 -0.02 0.22 16 36 H 0.42 -2.06 8.58 -92.71 -0.80 -2.86 16 37 H 0.06 0.28 6.32 -2.39 -0.02 0.26 16 38 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 39 H 0.08 -0.55 8.10 -2.39 -0.02 -0.57 16 40 H 0.14 -1.90 8.10 -2.38 -0.02 -1.91 16 41 H 0.11 -0.69 7.98 -2.39 -0.02 -0.71 16 42 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 43 H 0.42 0.88 8.35 -92.71 -0.77 0.10 16 44 H 0.19 -1.28 5.04 -2.91 -0.01 -1.30 16 45 H 0.13 -0.77 7.96 -2.38 -0.02 -0.79 16 46 H 0.39 -1.88 8.70 -74.06 -0.64 -2.53 16 47 H -0.28 0.31 7.11 99.48 0.71 1.02 16 48 H -0.30 -0.95 7.11 99.48 0.71 -0.24 16 49 H 0.18 -0.21 8.06 -2.91 -0.02 -0.23 16 50 H 0.13 -1.48 7.99 -2.39 -0.02 -1.50 16 51 H 0.07 -0.33 8.10 -2.39 -0.02 -0.35 16 Total: 0.00 -23.27 414.15 -1.67 -24.94 By element: Atomic # 1 Polarization: -11.17 SS G_CDS: -1.19 Total: -12.36 kcal Atomic # 6 Polarization: 10.09 SS G_CDS: 8.24 Total: 18.33 kcal Atomic # 7 Polarization: -7.11 SS G_CDS: -9.23 Total: -16.34 kcal Atomic # 8 Polarization: -10.59 SS G_CDS: -2.22 Total: -12.81 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.68 Total: -0.01 kcal Atomic # 14 Polarization: -3.80 SS G_CDS: 2.05 Total: -1.75 kcal Total: -23.27 -1.67 -24.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498494_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.928 kcal (2) G-P(sol) polarization free energy of solvation -23.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.942 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds