Wall clock time and date at job start Thu Mar 4 2021 13:15:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 O 1.45206 * 109.47226 * 239.99648 * 2 1 3 6 6 C 1.34644 * 116.99182 * 60.00595 * 5 2 1 7 7 O 1.21507 * 120.00513 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99419 * 180.02562 * 6 5 2 9 9 C 1.46497 * 119.99703 * 179.97438 * 8 6 5 10 10 C 1.53003 * 109.47214 * 179.97438 * 9 8 6 11 11 H 1.09004 * 112.84496 * 43.80505 * 10 9 8 12 12 C 1.53781 * 113.61611 * 175.00080 * 10 9 8 13 13 C 1.53780 * 87.08232 * 139.98520 * 12 10 9 14 14 F 1.39899 * 113.61539 * 219.94049 * 13 12 10 15 15 C 1.53001 * 113.61620 * 89.11555 * 13 12 10 16 16 N 1.46504 * 109.47240 * 180.02562 * 15 13 12 17 17 C 1.38604 * 120.00070 * 180.02562 * 16 15 13 18 18 N 1.29687 * 124.94960 * 0.02562 * 17 16 15 19 19 C 1.32118 * 116.86684 * 179.97438 * 18 17 16 20 20 C 1.33327 * 114.57946 * 0.02562 * 19 18 17 21 21 C 1.50706 * 125.95251 * 180.02562 * 20 19 18 22 22 O 1.42900 * 109.46911 * 300.00108 * 21 20 19 23 23 Si 1.86295 * 109.47176 * 179.97438 * 21 20 19 24 24 S 1.70962 * 124.94915 * 179.71777 * 17 16 15 25 25 C 1.53785 * 113.61765 * 272.50207 * 10 9 8 26 26 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 30 30 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 31 31 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 32 32 H 1.08993 * 109.46955 * 60.00011 * 4 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 4 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 35 35 H 0.97000 * 120.00566 * 359.97438 * 8 6 5 36 36 H 1.08997 * 109.47821 * 299.99776 * 9 8 6 37 37 H 1.09008 * 109.47087 * 60.00189 * 9 8 6 38 38 H 1.08998 * 113.61387 * 254.53336 * 12 10 9 39 39 H 1.08990 * 113.61394 * 25.43403 * 12 10 9 40 40 H 1.09002 * 109.47138 * 299.99718 * 15 13 12 41 41 H 1.09000 * 109.47132 * 60.00078 * 15 13 12 42 42 H 0.96999 * 119.99571 * 359.97438 * 16 15 13 43 43 H 1.08008 * 122.71132 * 180.02562 * 19 18 17 44 44 H 1.09002 * 109.47097 * 59.99801 * 21 20 19 45 45 H 0.96698 * 114.00067 * 299.99619 * 22 21 20 46 46 H 1.48498 * 109.99916 * 179.97438 * 23 21 20 47 47 H 1.48497 * 110.00148 * 301.31954 * 23 21 20 48 48 H 1.08996 * 113.60839 * 334.56456 * 25 10 9 49 49 H 1.08992 * 113.61322 * 105.46871 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 8 2.0140 -0.6846 -1.1856 6 6 1.6523 -0.1728 -2.3772 7 8 0.9510 0.8183 -2.4253 8 7 2.0672 -0.7606 -3.5169 9 6 1.6732 -0.2041 -4.8135 10 6 2.2733 -1.0527 -5.9363 11 1 2.1791 -2.1233 -5.7543 12 6 1.8196 -0.6246 -7.3419 13 6 3.2646 -0.8818 -7.8010 14 9 3.7424 0.0703 -8.7079 15 6 3.5146 -2.3192 -8.2618 16 7 4.9124 -2.4630 -8.6765 17 6 5.3766 -3.6853 -9.1365 18 7 4.6597 -4.7611 -9.2397 19 6 5.2664 -5.8410 -9.6993 20 6 6.5546 -5.6690 -9.9972 21 6 7.4862 -6.7232 -10.5375 22 8 7.5706 -7.8056 -9.6083 23 14 9.1787 -5.9864 -10.7890 24 16 6.9756 -3.9925 -9.6575 25 6 3.6902 -0.6182 -6.3469 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.6768 1.9562 0.8900 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 -1.7489 1.2492 33 1 3.1300 -0.7217 1.2490 34 1 1.6767 -0.2075 2.1393 35 1 2.6268 -1.5520 -3.4786 36 1 0.5863 -0.2085 -4.8957 37 1 2.0398 0.8191 -4.8963 38 1 1.0920 -1.3007 -7.7907 39 1 1.5213 0.4218 -7.4045 40 1 3.3073 -3.0053 -7.4405 41 1 2.8603 -2.5503 -9.1024 42 1 5.5127 -1.7025 -8.6299 43 1 4.7599 -6.7868 -9.8236 44 1 7.1052 -7.0911 -11.4902 45 1 7.9030 -7.5508 -8.7367 46 1 10.1070 -7.0162 -11.3210 47 1 9.0988 -4.8397 -11.7291 48 1 3.9032 0.4300 -6.1375 49 1 4.4726 -1.2892 -5.9925 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16498494_15704118.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:35 Heat of formation + Delta-G solvation = -84.153112 kcal Electronic energy + Delta-G solvation = -31393.917875 eV Core-core repulsion = 26786.090072 eV Total energy + Delta-G solvation = -4607.827803 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.151 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -48.73550 -41.82777 -40.82215 -40.18956 -38.36068 -37.94951 -36.58136 -35.66228 -34.74356 -31.63018 -29.98547 -28.37614 -28.30836 -27.77072 -27.05415 -26.23124 -24.37392 -23.64713 -22.73245 -21.27345 -20.87534 -20.47771 -19.57984 -19.08899 -18.22548 -17.80848 -17.47889 -17.32627 -17.09171 -16.65609 -16.52044 -16.39667 -16.08524 -15.80312 -15.60597 -15.55532 -15.52192 -15.33622 -15.01892 -14.82939 -14.45701 -14.33073 -14.05037 -13.99082 -13.44367 -13.38543 -13.19764 -13.13923 -12.91939 -12.88032 -12.87238 -12.54802 -12.47168 -12.39975 -12.22174 -12.09321 -12.03136 -11.56900 -11.42992 -11.39653 -11.21474 -11.12350 -10.83271 -10.31650 -10.22965 -10.18762 -8.79668 -5.11464 -0.08532 -0.01680 0.65102 1.15833 1.26503 1.57483 1.74802 1.88079 1.95223 2.03821 3.01182 3.11348 3.20225 3.24033 3.42241 3.50865 3.57322 3.73076 3.73914 3.78936 3.92397 3.93867 4.04707 4.25135 4.36583 4.48272 4.50690 4.55901 4.57457 4.60449 4.67259 4.68564 4.70178 4.75814 4.76245 4.78826 4.84268 4.87076 4.91951 4.97332 5.02496 5.09478 5.21914 5.26229 5.31360 5.37374 5.58662 5.70579 6.02007 6.37983 6.73566 6.93894 7.32982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.180 4.180 4 C -0.138 4.138 5 O -0.369 6.369 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.151 3.849 10 C -0.107 4.107 11 H 0.125 0.875 12 C -0.134 4.134 13 C 0.077 3.923 14 F -0.210 7.210 15 C 0.140 3.860 16 N -0.687 5.687 17 C 0.315 3.685 18 N -0.573 5.573 19 C 0.105 3.895 20 C -0.307 4.307 21 C -0.012 4.012 22 O -0.549 6.549 23 Si 0.728 3.272 24 S 0.115 5.885 25 C -0.144 4.144 26 H 0.063 0.937 27 H 0.086 0.914 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.062 0.938 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.070 0.930 34 H 0.098 0.902 35 H 0.418 0.582 36 H 0.071 0.929 37 H 0.067 0.933 38 H 0.100 0.900 39 H 0.105 0.895 40 H 0.101 0.899 41 H 0.072 0.928 42 H 0.424 0.576 43 H 0.180 0.820 44 H 0.119 0.881 45 H 0.395 0.605 46 H -0.271 1.271 47 H -0.270 1.270 48 H 0.098 0.902 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.216 -0.388 3.970 4.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.237 4.237 4 C -0.195 4.195 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.029 3.971 10 C -0.126 4.126 11 H 0.143 0.857 12 C -0.173 4.173 13 C 0.058 3.942 14 F -0.191 7.191 15 C 0.013 3.987 16 N -0.327 5.327 17 C -0.055 4.055 18 N -0.300 5.300 19 C -0.046 4.046 20 C -0.430 4.430 21 C -0.125 4.125 22 O -0.357 6.357 23 Si 0.632 3.368 24 S 0.364 5.636 25 C -0.181 4.181 26 H 0.082 0.918 27 H 0.105 0.895 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.089 0.911 34 H 0.116 0.884 35 H 0.255 0.745 36 H 0.089 0.911 37 H 0.086 0.914 38 H 0.119 0.881 39 H 0.123 0.877 40 H 0.119 0.881 41 H 0.090 0.910 42 H 0.262 0.738 43 H 0.197 0.803 44 H 0.136 0.864 45 H 0.246 0.754 46 H -0.197 1.197 47 H -0.196 1.196 48 H 0.117 0.883 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.455 0.639 3.057 3.973 hybrid contribution -0.714 -0.634 -0.621 1.139 sum 1.741 0.005 2.437 2.995 Atomic orbital electron populations 1.22475 0.94082 1.02934 1.04251 1.22342 0.94430 0.92471 0.81653 1.22471 1.01656 0.95349 1.04244 1.21892 1.02476 1.01245 0.93874 1.86312 1.71538 1.56580 1.13956 1.18382 0.78794 0.81515 0.81860 1.90914 1.42314 1.28052 1.87444 1.44691 1.55284 1.33098 1.02790 1.21333 1.00133 0.97040 0.78641 1.22601 0.95542 1.01572 0.92867 0.85702 1.23576 0.94594 1.04777 0.94363 1.22693 0.97760 0.86033 0.87731 1.92853 1.89783 1.66065 1.70389 1.21641 0.81814 0.93710 1.01492 1.43824 1.12195 1.07107 1.69616 1.23838 0.94205 0.90834 0.96659 1.66483 1.37309 0.99016 1.27165 1.21450 0.90717 0.96755 0.95647 1.25719 1.00087 0.97912 1.19284 1.24189 1.05918 0.87873 0.94569 1.86480 1.89039 1.33194 1.26987 0.94137 0.75589 0.78721 0.88388 1.83924 1.09475 1.06829 1.63342 1.23769 0.98141 1.04142 0.92089 0.91796 0.89538 0.91911 0.89545 0.91894 0.91806 0.91168 0.91141 0.88385 0.74521 0.91086 0.91440 0.88110 0.87696 0.88144 0.91001 0.73753 0.80265 0.86387 0.75444 1.19704 1.19644 0.88338 0.88600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.13 16 2 C 0.13 0.28 1.13 -10.79 -0.01 0.27 16 3 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 4 C -0.14 0.38 8.85 71.98 0.64 1.02 16 5 O -0.37 -1.59 9.94 -55.53 -0.55 -2.14 16 6 C 0.64 3.33 8.06 129.79 1.05 4.37 16 7 O -0.60 -6.55 11.88 19.82 0.24 -6.31 16 8 N -0.70 1.59 5.56 -590.84 -3.29 -1.70 16 9 C 0.15 -0.69 5.51 86.38 0.48 -0.21 16 10 C -0.11 1.02 3.40 -10.26 -0.03 0.98 16 11 H 0.13 -1.52 7.66 -2.38 -0.02 -1.54 16 12 C -0.13 1.08 7.13 31.12 0.22 1.30 16 13 C 0.08 -0.45 1.83 -10.27 -0.02 -0.47 16 14 F -0.21 -0.04 16.82 44.97 0.76 0.71 16 15 C 0.14 -0.64 5.52 86.38 0.48 -0.17 16 16 N -0.69 1.80 5.62 -351.00 -1.97 -0.17 16 17 C 0.32 0.42 8.09 179.32 1.45 1.87 16 18 N -0.57 -2.60 10.14 -202.03 -2.05 -4.65 16 19 C 0.10 0.31 11.22 83.54 0.94 1.25 16 20 C -0.31 -0.19 5.74 24.58 0.14 -0.05 16 21 C -0.01 0.01 2.98 71.24 0.21 0.22 16 22 O -0.55 0.38 12.87 -148.98 -1.92 -1.54 16 23 Si 0.73 -1.24 31.06 68.60 2.13 0.89 16 24 S 0.12 -0.10 20.57 -56.49 -1.16 -1.27 16 25 C -0.14 1.22 7.09 31.12 0.22 1.45 16 26 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 27 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 28 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 29 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 31 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 32 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 35 H 0.42 -2.92 8.58 -92.71 -0.80 -3.71 16 36 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 37 H 0.07 -0.16 7.84 -2.38 -0.02 -0.18 16 38 H 0.10 -0.95 8.10 -2.39 -0.02 -0.97 16 39 H 0.10 -0.75 8.10 -2.39 -0.02 -0.77 16 40 H 0.10 -0.64 7.34 -2.39 -0.02 -0.66 16 41 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 42 H 0.42 -2.14 8.31 -92.71 -0.77 -2.91 16 43 H 0.18 0.20 8.06 -2.91 -0.02 0.17 16 44 H 0.12 -0.04 7.96 -2.39 -0.02 -0.06 16 45 H 0.40 -3.29 8.70 -74.06 -0.64 -3.93 16 46 H -0.27 -1.16 7.11 99.48 0.71 -0.46 16 47 H -0.27 -0.86 7.11 99.48 0.71 -0.16 16 48 H 0.10 -0.69 7.89 -2.39 -0.02 -0.71 16 49 H 0.10 -0.96 8.10 -2.39 -0.02 -0.98 16 Total: 0.00 -19.31 413.67 -2.03 -21.34 By element: Atomic # 1 Polarization: -16.09 SS G_CDS: -1.17 Total: -17.26 kcal Atomic # 6 Polarization: 5.14 SS G_CDS: 6.96 Total: 12.10 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -7.31 Total: -6.52 kcal Atomic # 8 Polarization: -7.76 SS G_CDS: -2.23 Total: -9.99 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.76 Total: 0.71 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: 2.13 Total: 0.89 kcal Atomic # 16 Polarization: -0.10 SS G_CDS: -1.16 Total: -1.27 kcal Total: -19.31 -2.03 -21.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498494_15704118.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.816 kcal (2) G-P(sol) polarization free energy of solvation -19.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.031 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds