Wall clock time and date at job start Thu Mar 4 2021 13:15:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53001 * 109.47042 * 2 1 4 4 C 1.52995 * 109.46921 * 240.00111 * 2 1 3 5 5 O 1.45201 * 109.47279 * 120.00316 * 2 1 3 6 6 C 1.34633 * 117.00107 * 59.99658 * 5 2 1 7 7 O 1.21503 * 119.99951 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99754 * 180.02562 * 6 5 2 9 9 C 1.46503 * 119.99907 * 180.02562 * 8 6 5 10 10 C 1.53003 * 109.47082 * 180.02562 * 9 8 6 11 11 H 1.09004 * 112.84864 * 43.80431 * 10 9 8 12 12 C 1.53781 * 113.61438 * 175.00107 * 10 9 8 13 13 C 1.53780 * 87.08242 * 140.06445 * 12 10 9 14 14 F 1.39892 * 113.61254 * 89.19745 * 13 12 10 15 15 C 1.53002 * 113.61564 * 220.02083 * 13 12 10 16 16 N 1.46500 * 109.47099 * 183.47164 * 15 13 12 17 17 C 1.38398 * 120.00091 * 179.97438 * 16 15 13 18 18 N 1.32501 * 119.21725 * 0.25057 * 17 16 15 19 19 C 1.32272 * 120.74110 * 180.26714 * 18 17 16 20 20 C 1.38605 * 119.19705 * 359.48581 * 19 18 17 21 21 C 1.50698 * 120.72340 * 180.27714 * 20 19 18 22 22 O 1.42900 * 109.47025 * 64.99850 * 21 20 19 23 23 Si 1.86299 * 109.47430 * 185.00183 * 21 20 19 24 24 C 1.38607 * 118.56029 * 0.25336 * 20 19 18 25 25 N 1.32280 * 119.19188 * 0.02562 * 24 20 19 26 26 C 1.53785 * 87.17191 * 334.60922 * 13 12 10 27 27 H 1.09003 * 109.47210 * 299.99628 * 1 2 3 28 28 H 1.08992 * 109.47446 * 59.99977 * 1 2 3 29 29 H 1.09003 * 109.47033 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47294 * 180.02562 * 3 2 1 31 31 H 1.09000 * 109.47160 * 299.99933 * 3 2 1 32 32 H 1.08997 * 109.47209 * 60.00017 * 3 2 1 33 33 H 1.08998 * 109.47356 * 299.99752 * 4 2 1 34 34 H 1.09000 * 109.47349 * 60.00026 * 4 2 1 35 35 H 1.09005 * 109.47035 * 180.02562 * 4 2 1 36 36 H 0.97000 * 120.00056 * 0.02562 * 8 6 5 37 37 H 1.08999 * 109.47090 * 59.99934 * 9 8 6 38 38 H 1.08998 * 109.47051 * 300.00184 * 9 8 6 39 39 H 1.09003 * 113.61363 * 25.51392 * 12 10 9 40 40 H 1.08999 * 113.68991 * 254.62388 * 12 10 9 41 41 H 1.09002 * 109.46825 * 63.47179 * 15 13 12 42 42 H 1.08999 * 109.46728 * 303.47288 * 15 13 12 43 43 H 0.97005 * 119.99715 * 359.97438 * 16 15 13 44 44 H 1.08002 * 120.40454 * 179.76837 * 19 18 17 45 45 H 1.09004 * 109.46937 * 304.99996 * 21 20 19 46 46 H 0.96704 * 113.99585 * 180.02562 * 22 21 20 47 47 H 1.48499 * 110.00094 * 178.67874 * 23 21 20 48 48 H 1.48502 * 109.99864 * 299.99952 * 23 21 20 49 49 H 1.08001 * 120.40449 * 180.02562 * 24 20 19 50 50 H 1.08998 * 113.61223 * 139.93571 * 26 13 12 51 51 H 1.09002 * 113.61648 * 270.83977 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9517 -2.5096 0.5036 8 7 2.0673 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5831 10 6 2.2732 -4.6145 3.8801 11 1 2.1775 -3.9216 4.7161 12 6 1.8202 -6.0462 4.2116 13 6 3.2643 -6.3135 4.6676 14 9 3.4887 -6.0221 6.0173 15 6 3.7900 -7.6919 4.2619 16 7 5.1351 -7.8823 4.8103 17 6 5.8179 -9.0627 4.5740 18 7 5.2424 -10.0082 3.8457 19 6 5.8655 -11.1500 3.6056 20 6 7.1388 -11.3460 4.1170 21 6 7.8825 -12.6311 3.8594 22 8 8.1575 -12.7504 2.4622 23 14 9.4852 -12.6222 4.8092 24 6 7.7133 -10.3342 4.8703 25 7 7.0334 -9.2187 5.0777 26 6 3.6933 -5.1855 3.7143 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7216 -1.2490 36 1 2.6264 -2.2363 3.0836 37 1 2.0413 -4.6498 1.7384 38 1 0.5873 -4.1365 2.6275 39 1 1.5246 -6.6244 3.3361 40 1 1.0904 -6.0986 5.0195 41 1 3.8276 -7.7608 3.1747 42 1 3.1259 -8.4632 4.6521 43 1 5.5470 -7.1811 5.3389 44 1 5.3898 -11.9184 3.0143 45 1 7.2730 -13.4748 4.1831 46 1 8.6352 -13.5564 2.2228 47 1 10.2133 -13.8976 4.5888 48 1 10.3253 -11.4765 4.3771 49 1 8.7041 -10.4552 5.2828 50 1 4.4736 -4.5427 4.1217 51 1 3.9109 -5.5280 2.7026 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16498592_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:47 Heat of formation + Delta-G solvation = -71.755478 kcal Electronic energy + Delta-G solvation = -32905.462352 eV Core-core repulsion = 28143.593994 eV Total energy + Delta-G solvation = -4761.868358 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.190 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -48.85052 -42.09425 -41.83288 -39.98755 -38.37500 -38.10444 -36.84028 -35.70226 -34.77223 -34.74768 -32.90237 -30.07698 -28.38888 -28.32503 -27.76730 -27.03606 -26.16395 -25.65370 -23.51395 -22.99098 -22.27719 -21.27567 -20.58752 -19.42089 -19.16880 -18.87898 -18.46513 -17.74580 -17.35950 -17.12588 -16.93258 -16.64281 -16.48895 -16.34800 -16.05208 -15.75149 -15.68735 -15.47393 -15.29023 -15.23556 -14.91773 -14.58455 -14.49044 -14.40958 -13.94680 -13.93696 -13.68462 -13.40268 -13.36429 -13.30549 -13.13514 -12.93650 -12.88888 -12.55421 -12.37858 -12.32140 -12.19122 -12.07749 -11.93234 -11.79165 -11.52171 -11.42303 -11.37379 -11.21396 -11.11106 -10.66823 -10.23574 -10.05637 -9.16239 -4.91704 0.01527 0.11366 1.14980 1.30584 1.59810 1.71286 1.73416 1.95842 2.72586 3.00999 3.06865 3.12883 3.19594 3.31270 3.41061 3.45428 3.54851 3.62775 3.72275 3.73773 3.77456 3.89967 3.92400 4.04565 4.17071 4.22989 4.38409 4.49051 4.55195 4.57570 4.59197 4.61201 4.65263 4.71916 4.73608 4.74311 4.79900 4.81442 4.85498 4.87425 4.90458 4.99549 5.06000 5.14312 5.20324 5.24931 5.31845 5.39415 5.57042 5.66815 5.98130 6.29075 6.36022 6.63504 7.20881 7.31143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.150 3.850 10 C -0.111 4.111 11 H 0.111 0.889 12 C -0.130 4.130 13 C 0.079 3.921 14 F -0.197 7.197 15 C 0.134 3.866 16 N -0.693 5.693 17 C 0.551 3.449 18 N -0.579 5.579 19 C 0.214 3.786 20 C -0.247 4.247 21 C -0.058 4.058 22 O -0.559 6.559 23 Si 0.751 3.249 24 C 0.192 3.808 25 N -0.585 5.585 26 C -0.146 4.146 27 H 0.062 0.938 28 H 0.086 0.914 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.416 0.584 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.123 0.877 40 H 0.094 0.906 41 H 0.094 0.906 42 H 0.077 0.923 43 H 0.418 0.582 44 H 0.189 0.811 45 H 0.105 0.895 46 H 0.397 0.603 47 H -0.280 1.280 48 H -0.298 1.298 49 H 0.183 0.817 50 H 0.085 0.915 51 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.008 -1.496 1.871 2.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.361 5.361 9 C 0.028 3.972 10 C -0.130 4.130 11 H 0.129 0.871 12 C -0.168 4.168 13 C 0.060 3.940 14 F -0.178 7.178 15 C 0.010 3.990 16 N -0.330 5.330 17 C 0.194 3.806 18 N -0.303 5.303 19 C 0.047 3.953 20 C -0.255 4.255 21 C -0.168 4.168 22 O -0.370 6.370 23 Si 0.656 3.344 24 C 0.025 3.975 25 N -0.307 5.307 26 C -0.183 4.183 27 H 0.081 0.919 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.253 0.747 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.142 0.858 40 H 0.113 0.887 41 H 0.112 0.888 42 H 0.095 0.905 43 H 0.256 0.744 44 H 0.206 0.794 45 H 0.123 0.877 46 H 0.248 0.752 47 H -0.207 1.207 48 H -0.226 1.226 49 H 0.199 0.801 50 H 0.104 0.896 51 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -0.514 -0.247 1.492 1.597 hybrid contribution 1.040 -0.892 -0.667 1.524 sum 0.525 -1.139 0.825 1.501 Atomic orbital electron populations 1.22472 0.93991 1.03717 1.03519 1.22349 0.94499 0.92565 0.81521 1.21892 1.02426 0.90932 1.04252 1.22473 1.01588 1.02281 0.97371 1.86309 1.71563 1.23396 1.47266 1.18365 0.78805 0.80786 0.82566 1.90907 1.42303 1.71015 1.44343 1.44743 1.55304 1.12900 1.23118 1.21376 1.00174 0.78227 0.97380 1.22734 0.95714 0.97161 0.97353 0.87114 1.23544 0.94045 0.95317 1.03919 1.22166 0.99683 0.94660 0.77463 1.92859 1.95635 1.94483 1.34801 1.21825 0.81754 0.95334 1.00122 1.43990 1.17115 1.14399 1.57478 1.19572 0.85988 0.87583 0.87417 1.68015 1.38543 1.03341 1.20354 1.23228 0.90112 0.92127 0.89864 1.20826 0.98461 0.99369 1.06845 1.24542 1.08580 0.96490 0.87180 1.86543 1.79298 1.48545 1.22572 0.94356 0.74423 0.77194 0.88420 1.23116 0.98294 0.85973 0.90145 1.67916 1.08408 1.26201 1.28173 1.23822 0.97788 0.96296 1.00418 0.91939 0.89471 0.91741 0.91239 0.88319 0.91174 0.91735 0.89474 0.92016 0.74717 0.90865 0.90988 0.85848 0.88715 0.88808 0.90484 0.74374 0.79445 0.87697 0.75184 1.20659 1.22558 0.80098 0.89581 0.87173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.59 8.37 71.98 0.60 0.01 16 2 C 0.13 0.40 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.25 8.85 71.98 0.64 0.89 16 4 C -0.18 -0.61 8.37 71.98 0.60 -0.01 16 5 O -0.37 -2.06 9.94 -55.42 -0.55 -2.61 16 6 C 0.64 4.07 8.06 129.79 1.05 5.12 16 7 O -0.59 -6.93 11.88 19.83 0.24 -6.69 16 8 N -0.70 0.42 5.56 -590.85 -3.29 -2.87 16 9 C 0.15 -0.53 5.52 86.38 0.48 -0.05 16 10 C -0.11 0.78 3.73 -10.21 -0.04 0.75 16 11 H 0.11 -0.81 8.14 -2.38 -0.02 -0.82 16 12 C -0.13 0.97 7.10 31.12 0.22 1.19 16 13 C 0.08 -0.33 1.71 -10.27 -0.02 -0.35 16 14 F -0.20 -0.21 16.64 44.97 0.75 0.54 16 15 C 0.13 -0.24 5.38 86.38 0.46 0.22 16 16 N -0.69 -1.79 5.60 -351.04 -1.97 -3.76 16 17 C 0.55 3.76 8.43 261.49 2.20 5.96 16 18 N -0.58 -3.49 9.59 -197.99 -1.90 -5.38 16 19 C 0.21 0.59 10.99 84.71 0.93 1.52 16 20 C -0.25 -0.40 5.40 -19.69 -0.11 -0.50 16 21 C -0.06 0.19 2.82 71.24 0.20 0.39 16 22 O -0.56 0.30 12.82 -148.98 -1.91 -1.61 16 23 Si 0.75 -2.87 29.92 68.60 2.05 -0.82 16 24 C 0.19 0.65 9.92 84.71 0.84 1.49 16 25 N -0.58 -4.33 10.46 -197.99 -2.07 -6.40 16 26 C -0.15 0.91 7.09 31.18 0.22 1.13 16 27 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 28 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 30 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 33 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 34 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 35 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 36 H 0.42 -1.92 8.58 -92.71 -0.80 -2.71 16 37 H 0.07 -0.18 7.86 -2.39 -0.02 -0.20 16 38 H 0.07 -0.15 8.14 -2.39 -0.02 -0.16 16 39 H 0.12 -1.24 8.06 -2.39 -0.02 -1.26 16 40 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 41 H 0.09 -0.26 7.87 -2.39 -0.02 -0.28 16 42 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 43 H 0.42 0.81 8.19 -92.70 -0.76 0.05 16 44 H 0.19 -0.43 8.06 -2.91 -0.02 -0.45 16 45 H 0.11 -0.86 7.96 -2.38 -0.02 -0.88 16 46 H 0.40 -3.38 8.74 -74.05 -0.65 -4.02 16 47 H -0.28 -0.03 7.11 99.48 0.71 0.68 16 48 H -0.30 -1.11 7.06 99.48 0.70 -0.41 16 49 H 0.18 -0.23 5.04 -2.91 -0.01 -0.24 16 50 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 51 H 0.11 -0.76 7.68 -2.39 -0.02 -0.77 16 Total: 0.00 -22.23 416.96 -1.56 -23.78 By element: Atomic # 1 Polarization: -11.12 SS G_CDS: -1.19 Total: -12.31 kcal Atomic # 6 Polarization: 9.86 SS G_CDS: 8.27 Total: 18.13 kcal Atomic # 7 Polarization: -9.20 SS G_CDS: -9.22 Total: -18.42 kcal Atomic # 8 Polarization: -8.69 SS G_CDS: -2.23 Total: -10.91 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.75 Total: 0.54 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.05 Total: -0.82 kcal Total: -22.23 -1.56 -23.78 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498592_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.971 kcal (2) G-P(sol) polarization free energy of solvation -22.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds