Wall clock time and date at job start Thu Mar 4 2021 13:15:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52997 * 109.46868 * 2 1 4 4 C 1.53000 * 109.46986 * 240.00013 * 2 1 3 5 5 O 1.45202 * 109.47455 * 119.99907 * 2 1 3 6 6 C 1.34638 * 116.99667 * 59.99809 * 5 2 1 7 7 O 1.21508 * 120.00062 * 0.02562 * 6 5 2 8 8 N 1.34783 * 119.99500 * 179.97438 * 6 5 2 9 9 C 1.46497 * 119.99506 * 180.02562 * 8 6 5 10 10 C 1.53007 * 109.46871 * 180.02562 * 9 8 6 11 11 H 1.08996 * 112.84685 * 316.19603 * 10 9 8 12 12 C 1.53783 * 113.61229 * 87.50550 * 10 9 8 13 13 C 1.53784 * 87.07898 * 139.97886 * 12 10 9 14 14 F 1.39907 * 113.69007 * 89.12393 * 13 12 10 15 15 C 1.52998 * 113.61484 * 220.01609 * 13 12 10 16 16 N 1.46500 * 109.46925 * 277.50072 * 15 13 12 17 17 C 1.38998 * 119.99926 * 180.02562 * 16 15 13 18 18 N 1.32400 * 119.70809 * 180.02562 * 17 16 15 19 19 C 1.31975 * 121.62199 * 180.02562 * 18 17 16 20 20 C 1.38019 * 120.85657 * 359.97438 * 19 18 17 21 21 C 1.50706 * 120.33140 * 179.97438 * 20 19 18 22 22 O 1.42895 * 109.46938 * 244.99819 * 21 20 19 23 23 Si 1.86301 * 109.47233 * 5.00164 * 21 20 19 24 24 C 1.38874 * 119.33270 * 0.27270 * 20 19 18 25 25 C 1.38307 * 118.50340 * 359.46305 * 24 20 19 26 26 C 1.53774 * 87.08398 * 334.56724 * 13 12 10 27 27 H 1.09004 * 109.47103 * 299.99566 * 1 2 3 28 28 H 1.08995 * 109.47577 * 60.00069 * 1 2 3 29 29 H 1.09000 * 109.46705 * 180.02562 * 1 2 3 30 30 H 1.09007 * 109.47031 * 180.02562 * 3 2 1 31 31 H 1.08999 * 109.47227 * 299.99885 * 3 2 1 32 32 H 1.08998 * 109.47342 * 60.00409 * 3 2 1 33 33 H 1.08994 * 109.47482 * 299.99766 * 4 2 1 34 34 H 1.08999 * 109.47242 * 60.00034 * 4 2 1 35 35 H 1.09007 * 109.47049 * 179.97438 * 4 2 1 36 36 H 0.96998 * 120.00038 * 0.02562 * 8 6 5 37 37 H 1.09001 * 109.47246 * 60.00418 * 9 8 6 38 38 H 1.08997 * 109.47621 * 300.00075 * 9 8 6 39 39 H 1.08997 * 113.61228 * 25.43096 * 12 10 9 40 40 H 1.09002 * 113.60905 * 254.52549 * 12 10 9 41 41 H 1.08994 * 109.47062 * 157.50069 * 15 13 12 42 42 H 1.09002 * 109.47141 * 37.49535 * 15 13 12 43 43 H 0.97002 * 120.00050 * 0.02562 * 16 15 13 44 44 H 1.07997 * 119.56715 * 180.02562 * 19 18 17 45 45 H 1.09001 * 109.46953 * 124.99856 * 21 20 19 46 46 H 0.96709 * 113.99981 * 180.02562 * 22 21 20 47 47 H 1.48494 * 109.99834 * 178.67676 * 23 21 20 48 48 H 1.48493 * 109.99756 * 299.99648 * 23 21 20 49 49 H 1.07998 * 120.75292 * 179.70291 * 24 20 19 50 50 H 1.08008 * 120.44962 * 180.23799 * 25 24 20 51 51 H 1.09000 * 113.61885 * 139.97730 * 26 13 12 52 52 H 1.08998 * 113.61561 * 270.88732 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0141 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5096 0.5036 8 7 2.0682 -2.6657 2.4167 9 6 1.6750 -4.0671 2.5826 10 6 2.2751 -4.6150 3.8791 11 1 3.3158 -4.3233 4.0201 12 6 1.3930 -4.3753 5.1157 13 6 1.7835 -5.7912 5.5713 14 9 2.9462 -5.8310 6.3485 15 6 0.6265 -6.5760 6.1927 16 7 0.4793 -6.1967 7.6001 17 6 -0.5130 -6.7823 8.3776 18 7 -0.6412 -6.4349 9.6487 19 6 -1.5694 -6.9671 10.4213 20 6 -2.4461 -7.9114 9.9267 21 6 -3.5013 -8.5118 10.8197 22 8 -3.2451 -9.9075 10.9878 23 14 -3.4625 -7.6687 12.4806 24 6 -2.3421 -8.3073 8.5997 25 6 -1.3632 -7.7280 7.8129 26 6 2.0228 -6.1176 4.0878 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7209 -1.2495 36 1 2.6278 -2.2368 3.0828 37 1 2.0415 -4.6498 1.7375 38 1 0.5882 -4.1367 2.6279 39 1 0.3337 -4.2683 4.8823 40 1 1.7648 -3.5876 5.7711 41 1 0.8335 -7.6439 6.1239 42 1 -0.2954 -6.3493 5.6571 43 1 1.0743 -5.5370 7.9894 44 1 -1.6445 -6.6589 11.4537 45 1 -4.4826 -8.3746 10.3655 46 1 -3.8869 -10.3600 11.5522 47 1 -4.5195 -8.2298 13.3597 48 1 -2.1297 -7.8484 13.1103 49 1 -3.0129 -9.0479 8.1902 50 1 -1.2567 -8.0098 6.7757 51 1 2.9030 -6.7365 3.9133 52 1 1.1357 -6.4869 3.5734 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16498592_13915762.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:51 Heat of formation + Delta-G solvation = -89.942972 kcal Electronic energy + Delta-G solvation = -32758.818736 eV Core-core repulsion = 28061.587620 eV Total energy + Delta-G solvation = -4697.231116 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.194 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -48.82436 -41.81770 -41.36713 -39.97030 -38.34690 -38.03875 -36.68749 -35.66360 -34.74676 -33.55267 -31.96026 -29.87129 -28.37323 -28.31126 -27.65973 -26.99511 -25.71535 -24.83825 -23.47237 -22.56687 -22.03393 -21.22956 -20.55382 -19.17400 -18.83311 -18.52185 -18.15505 -17.71469 -17.33983 -17.05319 -16.73018 -16.63856 -16.44019 -16.22772 -15.73793 -15.60761 -15.54190 -15.43414 -15.26042 -15.11120 -14.79215 -14.46050 -14.28326 -14.05585 -13.98071 -13.90103 -13.86224 -13.57423 -13.35776 -13.34692 -13.11982 -12.92139 -12.87462 -12.54359 -12.41056 -12.35403 -12.15222 -12.06350 -12.03146 -11.42213 -11.40577 -11.35048 -11.15137 -11.08331 -10.76043 -10.60609 -10.30933 -10.21719 -8.73339 -4.92324 0.21360 0.40131 1.16868 1.32246 1.59101 1.74993 1.95286 2.00425 2.78014 3.04274 3.14279 3.22055 3.29432 3.45730 3.49884 3.57575 3.60664 3.73731 3.78927 3.84803 3.93847 4.01352 4.05948 4.10428 4.24198 4.33666 4.38752 4.48979 4.50393 4.53587 4.60692 4.62691 4.67451 4.73847 4.75273 4.75855 4.76742 4.83008 4.86859 4.89112 4.93720 5.00093 5.01493 5.07620 5.21816 5.26409 5.27833 5.33351 5.40645 5.49071 5.58569 5.96729 6.37246 6.44679 6.63090 7.11560 7.32541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.642 3.358 7 O -0.594 6.594 8 N -0.701 5.701 9 C 0.151 3.849 10 C -0.114 4.114 11 H 0.106 0.894 12 C -0.144 4.144 13 C 0.078 3.922 14 F -0.202 7.202 15 C 0.119 3.881 16 N -0.721 5.721 17 C 0.393 3.607 18 N -0.566 5.566 19 C 0.143 3.857 20 C -0.198 4.198 21 C -0.064 4.064 22 O -0.560 6.560 23 Si 0.749 3.251 24 C -0.012 4.012 25 C -0.239 4.239 26 C -0.130 4.130 27 H 0.061 0.939 28 H 0.086 0.914 29 H 0.065 0.935 30 H 0.068 0.932 31 H 0.098 0.902 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.416 0.584 37 H 0.070 0.930 38 H 0.077 0.923 39 H 0.116 0.884 40 H 0.081 0.919 41 H 0.080 0.920 42 H 0.107 0.893 43 H 0.405 0.595 44 H 0.162 0.838 45 H 0.099 0.901 46 H 0.394 0.606 47 H -0.281 1.281 48 H -0.302 1.302 49 H 0.151 0.849 50 H 0.156 0.844 51 H 0.090 0.910 52 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.683 2.026 -2.671 4.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.395 3.605 7 O -0.485 6.485 8 N -0.361 5.361 9 C 0.029 3.971 10 C -0.132 4.132 11 H 0.124 0.876 12 C -0.182 4.182 13 C 0.059 3.941 14 F -0.183 7.183 15 C -0.006 4.006 16 N -0.354 5.354 17 C 0.157 3.843 18 N -0.284 5.284 19 C -0.014 4.014 20 C -0.203 4.203 21 C -0.174 4.174 22 O -0.370 6.370 23 Si 0.656 3.344 24 C -0.037 4.037 25 C -0.263 4.263 26 C -0.168 4.168 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.087 0.913 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.252 0.748 37 H 0.089 0.911 38 H 0.095 0.905 39 H 0.134 0.866 40 H 0.100 0.900 41 H 0.098 0.902 42 H 0.125 0.875 43 H 0.240 0.760 44 H 0.178 0.822 45 H 0.116 0.884 46 H 0.245 0.755 47 H -0.208 1.208 48 H -0.231 1.231 49 H 0.168 0.832 50 H 0.174 0.826 51 H 0.109 0.891 52 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.823 2.430 -2.525 3.950 hybrid contribution -0.007 -1.475 0.485 1.553 sum -1.830 0.955 -2.039 2.902 Atomic orbital electron populations 1.22470 0.93951 1.03754 1.03498 1.22345 0.94522 0.92532 0.81525 1.21894 1.02420 0.90991 1.04232 1.22473 1.01592 1.02293 0.97356 1.86312 1.71568 1.23447 1.47258 1.18366 0.78826 0.80771 0.82541 1.90907 1.42321 1.70993 1.44297 1.44756 1.55292 1.12973 1.23102 1.21390 1.00164 0.78096 0.97478 1.22712 1.00767 0.96671 0.93097 0.87610 1.23780 1.02282 0.95136 0.96955 1.22160 0.81722 0.99205 0.91016 1.92864 1.51055 1.97379 1.76957 1.22044 0.98363 0.99888 0.80262 1.44379 1.34596 1.46330 1.10070 1.18616 0.88144 0.89620 0.87929 1.67128 1.24733 1.31270 1.05282 1.22398 0.88442 0.91965 0.98601 1.20129 1.01661 1.02415 0.96106 1.24645 0.99144 0.85304 1.08313 1.86551 1.57271 1.20482 1.72683 0.94326 0.76883 0.89407 0.73830 1.21447 0.95124 0.95002 0.92159 1.21673 0.99691 1.02026 1.02942 1.23562 1.05602 0.95921 0.91732 0.91954 0.89510 0.91653 0.91261 0.88335 0.91201 0.91687 0.89496 0.92026 0.74788 0.91120 0.90511 0.86574 0.90020 0.90203 0.87489 0.75960 0.82174 0.88363 0.75523 1.20800 1.23055 0.83164 0.82593 0.89089 0.85284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 2 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 3 C -0.14 0.33 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 5 O -0.37 -1.78 9.94 -55.47 -0.55 -2.33 16 6 C 0.64 3.43 8.06 129.79 1.05 4.47 16 7 O -0.59 -6.22 11.88 19.82 0.24 -5.98 16 8 N -0.70 1.13 5.56 -590.84 -3.29 -2.16 16 9 C 0.15 -0.75 5.51 86.38 0.48 -0.28 16 10 C -0.11 0.95 3.73 -10.26 -0.04 0.91 16 11 H 0.11 -0.80 8.14 -2.39 -0.02 -0.82 16 12 C -0.14 1.15 7.08 31.12 0.22 1.37 16 13 C 0.08 -0.47 1.67 -10.27 -0.02 -0.49 16 14 F -0.20 -0.20 16.80 44.97 0.76 0.55 16 15 C 0.12 -0.72 4.58 86.38 0.40 -0.32 16 16 N -0.72 -0.20 5.64 -345.08 -1.95 -2.14 16 17 C 0.39 1.77 7.65 133.07 1.02 2.79 16 18 N -0.57 -4.65 10.39 -193.27 -2.01 -6.66 16 19 C 0.14 0.80 9.84 84.62 0.83 1.64 16 20 C -0.20 -0.67 5.39 -19.76 -0.11 -0.78 16 21 C -0.06 0.03 2.81 71.24 0.20 0.23 16 22 O -0.56 -1.21 12.81 -148.98 -1.91 -3.12 16 23 Si 0.75 -0.74 29.88 68.60 2.05 1.31 16 24 C -0.01 -0.02 9.83 22.44 0.22 0.20 16 25 C -0.24 -0.25 9.33 22.50 0.21 -0.04 16 26 C -0.13 1.22 7.10 31.12 0.22 1.44 16 27 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 28 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 29 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 30 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 33 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 34 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.06 0.13 8.14 -2.38 -0.02 0.11 16 36 H 0.42 -2.20 8.58 -92.71 -0.80 -3.00 16 37 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.08 -0.36 7.84 -2.39 -0.02 -0.38 16 39 H 0.12 -1.13 7.72 -2.39 -0.02 -1.15 16 40 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 41 H 0.08 -0.51 7.93 -2.39 -0.02 -0.53 16 42 H 0.11 -1.09 7.73 -2.39 -0.02 -1.11 16 43 H 0.40 0.67 8.31 -92.71 -0.77 -0.10 16 44 H 0.16 0.41 4.87 -2.91 -0.01 0.39 16 45 H 0.10 -0.51 7.96 -2.39 -0.02 -0.53 16 46 H 0.39 -2.34 8.74 -74.05 -0.65 -2.99 16 47 H -0.28 -0.69 7.11 99.48 0.71 0.01 16 48 H -0.30 -2.14 7.05 99.48 0.70 -1.44 16 49 H 0.15 -0.31 8.06 -2.91 -0.02 -0.33 16 50 H 0.16 -0.72 6.71 -2.91 -0.02 -0.74 16 51 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 52 H 0.13 -1.71 8.06 -2.39 -0.02 -1.73 16 Total: 0.00 -22.49 420.19 -1.37 -23.86 By element: Atomic # 1 Polarization: -14.80 SS G_CDS: -1.22 Total: -16.02 kcal Atomic # 6 Polarization: 6.18 SS G_CDS: 6.51 Total: 12.69 kcal Atomic # 7 Polarization: -3.72 SS G_CDS: -7.24 Total: -10.96 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: -2.22 Total: -11.43 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.76 Total: 0.55 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.05 Total: 1.31 kcal Total: -22.49 -1.37 -23.86 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498592_13915762.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.083 kcal (2) G-P(sol) polarization free energy of solvation -22.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.860 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds