Wall clock time and date at job start Thu Mar 4 2021 13:15:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52999 * 109.46617 * 2 1 4 4 C 1.52998 * 109.47154 * 239.99868 * 2 1 3 5 5 O 1.45199 * 109.46970 * 119.99613 * 2 1 3 6 6 C 1.34639 * 117.00043 * 60.00158 * 5 2 1 7 7 O 1.21510 * 119.99935 * 0.02562 * 6 5 2 8 8 N 1.34773 * 119.99763 * 179.97438 * 6 5 2 9 9 C 1.46498 * 119.99662 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.47123 * 180.02562 * 9 8 6 11 11 H 1.08994 * 112.85021 * 43.80252 * 10 9 8 12 12 C 1.53784 * 113.61688 * 175.00584 * 10 9 8 13 13 C 1.53779 * 87.08250 * 140.06150 * 12 10 9 14 14 F 1.39897 * 113.61331 * 89.20155 * 13 12 10 15 15 C 1.52999 * 113.61220 * 220.01606 * 13 12 10 16 16 N 1.46496 * 109.47085 * 185.00041 * 15 13 12 17 17 C 1.38610 * 120.00635 * 179.97438 * 16 15 13 18 18 N 1.29692 * 124.94302 * 0.30799 * 17 16 15 19 19 C 1.32117 * 116.86604 * 180.22594 * 18 17 16 20 20 C 1.33327 * 114.57651 * 359.48172 * 19 18 17 21 21 C 1.50706 * 125.95118 * 180.24995 * 20 19 18 22 22 O 1.42898 * 109.47247 * 65.00013 * 21 20 19 23 23 Si 1.86299 * 109.46994 * 185.00157 * 21 20 19 24 24 S 1.70958 * 124.95635 * 180.02562 * 17 16 15 25 25 C 1.53785 * 87.08294 * 334.56657 * 13 12 10 26 26 H 1.08994 * 109.47501 * 300.00376 * 1 2 3 27 27 H 1.08999 * 109.47028 * 60.00283 * 1 2 3 28 28 H 1.09002 * 109.46883 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47138 * 179.97438 * 3 2 1 30 30 H 1.08999 * 109.47190 * 299.99618 * 3 2 1 31 31 H 1.09001 * 109.47832 * 59.99760 * 3 2 1 32 32 H 1.08994 * 109.46929 * 299.99617 * 4 2 1 33 33 H 1.08999 * 109.47276 * 60.00001 * 4 2 1 34 34 H 1.08999 * 109.46583 * 179.97438 * 4 2 1 35 35 H 0.96997 * 120.00129 * 0.02562 * 8 6 5 36 36 H 1.09006 * 109.47136 * 60.00487 * 9 8 6 37 37 H 1.09001 * 109.47721 * 300.00537 * 9 8 6 38 38 H 1.09007 * 113.61324 * 25.50832 * 12 10 9 39 39 H 1.08995 * 113.60907 * 254.61803 * 12 10 9 40 40 H 1.09000 * 109.47319 * 65.00410 * 15 13 12 41 41 H 1.08993 * 109.47396 * 305.00070 * 15 13 12 42 42 H 0.97009 * 119.99816 * 0.02562 * 16 15 13 43 43 H 1.08002 * 122.71469 * 179.75697 * 19 18 17 44 44 H 1.08998 * 109.46748 * 304.99867 * 21 20 19 45 45 H 0.96692 * 113.99995 * 179.97438 * 22 21 20 46 46 H 1.48500 * 109.99906 * 299.99823 * 23 21 20 47 47 H 1.48495 * 110.00073 * 61.32000 * 23 21 20 48 48 H 1.09002 * 113.61374 * 139.98155 * 25 13 12 49 49 H 1.08997 * 113.61074 * 270.88687 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9517 -2.5097 0.5037 8 7 2.0681 -2.6655 2.4168 9 6 1.6740 -4.0666 2.5834 10 6 2.2742 -4.6146 3.8797 11 1 2.1800 -3.9216 4.7158 12 6 1.8205 -6.0460 4.2119 13 6 3.2650 -6.3143 4.6661 14 9 3.4913 -6.0230 6.0156 15 6 3.7890 -7.6931 4.2599 16 7 5.1197 -7.8992 4.8369 17 6 5.7997 -9.0846 4.6052 18 7 5.3526 -10.0699 3.8902 19 6 6.1341 -11.1293 3.7785 20 6 7.2986 -11.0295 4.4201 21 6 8.3798 -12.0786 4.4596 22 8 8.9117 -12.2642 3.1463 23 14 9.7391 -11.5266 5.6078 24 16 7.3528 -9.4581 5.2145 25 6 3.6914 -5.1871 3.7108 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4426 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9565 0.8899 32 1 1.6768 -1.7489 -1.2491 33 1 1.6768 -0.2075 -2.1392 34 1 3.1301 -0.7208 -1.2493 35 1 2.6276 -2.2366 3.0830 36 1 2.0398 -4.6499 1.7383 37 1 0.5871 -4.1355 2.6290 38 1 1.5234 -6.6240 3.3367 39 1 1.0918 -6.0963 5.0209 40 1 3.8510 -7.7526 3.1733 41 1 3.1104 -8.4626 4.6278 42 1 5.5247 -7.2063 5.3818 43 1 5.8543 -12.0037 3.2097 44 1 7.9608 -13.0188 4.8181 45 1 9.6143 -12.9266 3.0965 46 1 10.3186 -10.2456 5.1300 47 1 9.2056 -11.3608 6.9837 48 1 4.4732 -4.5443 4.1154 49 1 3.9059 -5.5304 2.6987 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_16498592_15704118.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:56 Heat of formation + Delta-G solvation = -81.601474 kcal Electronic energy + Delta-G solvation = -31230.253582 eV Core-core repulsion = 26622.536427 eV Total energy + Delta-G solvation = -4607.717155 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.151 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.99725 -41.72029 -40.73604 -40.12306 -38.27056 -37.90373 -36.71028 -35.59302 -34.71719 -31.84143 -30.25089 -28.33148 -28.29086 -27.89047 -27.31102 -26.24393 -24.36628 -23.43794 -22.51787 -21.36033 -20.81965 -20.50479 -19.79625 -19.05192 -18.48389 -17.77827 -17.61303 -17.36280 -17.25174 -16.94628 -16.60456 -16.44918 -15.98428 -15.74138 -15.63410 -15.48249 -15.40125 -15.28592 -15.00133 -14.57883 -14.42362 -14.34676 -14.22041 -14.07612 -13.86584 -13.62614 -13.41260 -13.12278 -12.85526 -12.84255 -12.82952 -12.56008 -12.44402 -12.35208 -12.30082 -12.23560 -12.06572 -11.66257 -11.59674 -11.29805 -11.23466 -10.97798 -10.66597 -10.32319 -10.23401 -10.17157 -8.79417 -5.22013 -0.06335 0.06338 0.65171 1.17223 1.22217 1.57491 1.88989 1.91945 1.98528 2.01256 2.82458 2.86337 3.03086 3.09537 3.23039 3.35794 3.43819 3.66206 3.77578 3.82779 3.84728 3.96946 3.97097 4.00919 4.18790 4.33889 4.37914 4.40055 4.43997 4.48685 4.55655 4.57405 4.62760 4.65701 4.70041 4.73797 4.77469 4.77925 4.87677 4.92845 5.00834 5.05727 5.09565 5.20353 5.36219 5.44411 5.59102 5.70143 5.93512 6.38376 6.58159 6.94989 7.40963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.566 6.566 8 N -0.712 5.712 9 C 0.149 3.851 10 C -0.123 4.123 11 H 0.107 0.893 12 C -0.136 4.136 13 C 0.080 3.920 14 F -0.184 7.184 15 C 0.129 3.871 16 N -0.691 5.691 17 C 0.329 3.671 18 N -0.547 5.547 19 C 0.123 3.877 20 C -0.261 4.261 21 C -0.017 4.017 22 O -0.546 6.546 23 Si 0.668 3.332 24 S 0.075 5.925 25 C -0.150 4.150 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.407 0.593 36 H 0.076 0.924 37 H 0.077 0.923 38 H 0.110 0.890 39 H 0.092 0.908 40 H 0.090 0.910 41 H 0.082 0.918 42 H 0.418 0.582 43 H 0.179 0.821 44 H 0.083 0.917 45 H 0.383 0.617 46 H -0.238 1.238 47 H -0.243 1.243 48 H 0.086 0.914 49 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.419 -0.686 1.525 2.941 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.403 3.597 7 O -0.455 6.455 8 N -0.372 5.372 9 C 0.026 3.974 10 C -0.141 4.141 11 H 0.125 0.875 12 C -0.175 4.175 13 C 0.061 3.939 14 F -0.164 7.164 15 C 0.002 3.998 16 N -0.332 5.332 17 C -0.042 4.042 18 N -0.272 5.272 19 C -0.027 4.027 20 C -0.383 4.383 21 C -0.131 4.131 22 O -0.352 6.352 23 Si 0.567 3.433 24 S 0.323 5.677 25 C -0.188 4.188 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.094 0.906 37 H 0.095 0.905 38 H 0.129 0.871 39 H 0.111 0.889 40 H 0.109 0.891 41 H 0.100 0.900 42 H 0.256 0.744 43 H 0.196 0.804 44 H 0.101 0.899 45 H 0.231 0.769 46 H -0.162 1.162 47 H -0.167 1.167 48 H 0.104 0.896 49 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 1.927 0.821 1.792 2.756 hybrid contribution -0.383 -0.183 -0.020 0.425 sum 1.544 0.637 1.771 2.435 Atomic orbital electron populations 1.22522 0.93827 1.05041 1.02727 1.22123 0.94462 0.91564 0.81852 1.21879 1.02327 0.92348 1.03349 1.22520 1.01593 1.03446 0.96555 1.86304 1.71495 1.23440 1.46751 1.18097 0.78829 0.80662 0.82152 1.90926 1.40938 1.70493 1.43140 1.44685 1.55925 1.12595 1.23985 1.21327 1.00371 0.79024 0.96672 1.22806 0.96034 0.97054 0.98229 0.87462 1.23526 0.94919 0.95579 1.03448 1.22097 0.98764 0.94934 0.78096 1.92882 1.95431 1.94430 1.33648 1.21862 0.83213 0.94902 0.99792 1.43790 1.18254 1.14261 1.56858 1.23739 0.93693 0.91310 0.95415 1.66471 1.35256 1.01610 1.23902 1.21347 0.88421 0.96151 0.96817 1.24307 1.01643 0.98991 1.13336 1.23682 0.99485 0.97820 0.92119 1.86519 1.57266 1.64261 1.27164 0.95153 0.83868 0.85858 0.78379 1.84134 1.16091 1.13934 1.53499 1.23814 0.97767 0.96685 1.00504 0.92122 0.90906 0.89442 0.91405 0.89908 0.91396 0.89439 0.90908 0.92134 0.75856 0.90569 0.90496 0.87140 0.88897 0.89142 0.89992 0.74444 0.80381 0.89945 0.76909 1.16218 1.16658 0.89560 0.87503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 5 O -0.37 -0.90 9.94 -40.32 -0.40 -1.30 16 6 C 0.65 1.75 8.06 54.05 0.44 2.19 16 7 O -0.57 -2.88 11.88 -19.28 -0.23 -3.11 16 8 N -0.71 0.37 5.56 -65.28 -0.36 0.01 16 9 C 0.15 -0.28 5.51 -4.04 -0.02 -0.30 16 10 C -0.12 0.42 3.73 -89.80 -0.33 0.09 16 11 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 12 C -0.14 0.47 7.10 -25.92 -0.18 0.29 16 13 C 0.08 -0.18 1.74 -89.81 -0.16 -0.34 16 14 F -0.18 -0.01 16.58 2.25 0.04 0.02 16 15 C 0.13 -0.13 5.70 -4.04 -0.02 -0.15 16 16 N -0.69 -0.31 5.61 -62.30 -0.35 -0.66 16 17 C 0.33 0.93 8.09 -87.68 -0.71 0.23 16 18 N -0.55 -2.21 10.14 -15.21 -0.15 -2.37 16 19 C 0.12 0.40 11.24 -19.14 -0.22 0.18 16 20 C -0.26 -0.75 5.76 -36.02 -0.21 -0.95 16 21 C -0.02 0.00 2.98 36.01 0.11 0.10 16 22 O -0.55 -0.14 12.86 -35.23 -0.45 -0.59 16 23 Si 0.67 -0.43 31.07 -169.99 -5.28 -5.71 16 24 S 0.07 0.21 20.59 -107.50 -2.21 -2.01 16 25 C -0.15 0.49 7.08 -25.91 -0.18 0.31 16 26 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.41 -0.97 8.58 -40.82 -0.35 -1.32 16 36 H 0.08 -0.11 7.85 -51.93 -0.41 -0.51 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.11 -0.50 8.06 -51.93 -0.42 -0.92 16 39 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 40 H 0.09 -0.11 7.84 -51.93 -0.41 -0.52 16 41 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 42 H 0.42 -0.33 8.15 -40.82 -0.33 -0.66 16 43 H 0.18 0.24 8.06 -52.49 -0.42 -0.18 16 44 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 45 H 0.38 -1.90 8.74 45.56 0.40 -1.50 16 46 H -0.24 -0.60 7.11 56.52 0.40 -0.20 16 47 H -0.24 -0.43 7.11 56.52 0.40 -0.02 16 48 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 49 H 0.11 -0.37 7.66 -51.93 -0.40 -0.77 16 LS Contribution 414.51 15.07 6.25 6.25 Total: 0.00 -9.17 414.51 -11.44 -20.60 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: -7.63 Total: -13.40 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -0.64 Total: 2.25 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -0.87 Total: -3.01 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -1.08 Total: -5.00 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 0.04 Total: 0.02 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.28 Total: -5.71 kcal Atomic # 16 Polarization: 0.21 SS G_CDS: -2.21 Total: -2.01 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -9.17 -11.44 -20.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498592_15704118.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.997 kcal (2) G-P(sol) polarization free energy of solvation -9.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.601 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds