Wall clock time and date at job start Thu Mar 4 2021 13:15:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52999 * 109.46617 * 2 1 4 4 C 1.52998 * 109.47154 * 239.99868 * 2 1 3 5 5 O 1.45199 * 109.46970 * 119.99613 * 2 1 3 6 6 C 1.34639 * 117.00043 * 60.00158 * 5 2 1 7 7 O 1.21510 * 119.99935 * 0.02562 * 6 5 2 8 8 N 1.34773 * 119.99763 * 179.97438 * 6 5 2 9 9 C 1.46498 * 119.99662 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.47123 * 180.02562 * 9 8 6 11 11 H 1.08994 * 112.85021 * 43.80252 * 10 9 8 12 12 C 1.53784 * 113.61688 * 175.00584 * 10 9 8 13 13 C 1.53779 * 87.08250 * 140.06150 * 12 10 9 14 14 F 1.39897 * 113.61331 * 89.20155 * 13 12 10 15 15 C 1.52999 * 113.61220 * 220.01606 * 13 12 10 16 16 N 1.46496 * 109.47085 * 185.00041 * 15 13 12 17 17 C 1.38610 * 120.00635 * 179.97438 * 16 15 13 18 18 N 1.29692 * 124.94302 * 0.30799 * 17 16 15 19 19 C 1.32117 * 116.86604 * 180.22594 * 18 17 16 20 20 C 1.33327 * 114.57651 * 359.48172 * 19 18 17 21 21 C 1.50706 * 125.95118 * 180.24995 * 20 19 18 22 22 O 1.42898 * 109.47247 * 65.00013 * 21 20 19 23 23 Si 1.86299 * 109.46994 * 185.00157 * 21 20 19 24 24 S 1.70958 * 124.95635 * 180.02562 * 17 16 15 25 25 C 1.53785 * 87.08294 * 334.56657 * 13 12 10 26 26 H 1.08994 * 109.47501 * 300.00376 * 1 2 3 27 27 H 1.08999 * 109.47028 * 60.00283 * 1 2 3 28 28 H 1.09002 * 109.46883 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47138 * 179.97438 * 3 2 1 30 30 H 1.08999 * 109.47190 * 299.99618 * 3 2 1 31 31 H 1.09001 * 109.47832 * 59.99760 * 3 2 1 32 32 H 1.08994 * 109.46929 * 299.99617 * 4 2 1 33 33 H 1.08999 * 109.47276 * 60.00001 * 4 2 1 34 34 H 1.08999 * 109.46583 * 179.97438 * 4 2 1 35 35 H 0.96997 * 120.00129 * 0.02562 * 8 6 5 36 36 H 1.09006 * 109.47136 * 60.00487 * 9 8 6 37 37 H 1.09001 * 109.47721 * 300.00537 * 9 8 6 38 38 H 1.09007 * 113.61324 * 25.50832 * 12 10 9 39 39 H 1.08995 * 113.60907 * 254.61803 * 12 10 9 40 40 H 1.09000 * 109.47319 * 65.00410 * 15 13 12 41 41 H 1.08993 * 109.47396 * 305.00070 * 15 13 12 42 42 H 0.97009 * 119.99816 * 0.02562 * 16 15 13 43 43 H 1.08002 * 122.71469 * 179.75697 * 19 18 17 44 44 H 1.08998 * 109.46748 * 304.99867 * 21 20 19 45 45 H 0.96692 * 113.99995 * 179.97438 * 22 21 20 46 46 H 1.48500 * 109.99906 * 299.99823 * 23 21 20 47 47 H 1.48495 * 110.00073 * 61.32000 * 23 21 20 48 48 H 1.09002 * 113.61374 * 139.98155 * 25 13 12 49 49 H 1.08997 * 113.61074 * 270.88687 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9517 -2.5097 0.5037 8 7 2.0681 -2.6655 2.4168 9 6 1.6740 -4.0666 2.5834 10 6 2.2742 -4.6146 3.8797 11 1 2.1800 -3.9216 4.7158 12 6 1.8205 -6.0460 4.2119 13 6 3.2650 -6.3143 4.6661 14 9 3.4913 -6.0230 6.0156 15 6 3.7890 -7.6931 4.2599 16 7 5.1197 -7.8992 4.8369 17 6 5.7997 -9.0846 4.6052 18 7 5.3526 -10.0699 3.8902 19 6 6.1341 -11.1293 3.7785 20 6 7.2986 -11.0295 4.4201 21 6 8.3798 -12.0786 4.4596 22 8 8.9117 -12.2642 3.1463 23 14 9.7391 -11.5266 5.6078 24 16 7.3528 -9.4581 5.2145 25 6 3.6914 -5.1871 3.7108 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4426 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6766 1.9565 0.8899 32 1 1.6768 -1.7489 -1.2491 33 1 1.6768 -0.2075 -2.1392 34 1 3.1301 -0.7208 -1.2493 35 1 2.6276 -2.2366 3.0830 36 1 2.0398 -4.6499 1.7383 37 1 0.5871 -4.1355 2.6290 38 1 1.5234 -6.6240 3.3367 39 1 1.0918 -6.0963 5.0209 40 1 3.8510 -7.7526 3.1733 41 1 3.1104 -8.4626 4.6278 42 1 5.5247 -7.2063 5.3818 43 1 5.8543 -12.0037 3.2097 44 1 7.9608 -13.0188 4.8181 45 1 9.6143 -12.9266 3.0965 46 1 10.3186 -10.2456 5.1300 47 1 9.2056 -11.3608 6.9837 48 1 4.4732 -4.5443 4.1154 49 1 3.9059 -5.5304 2.6987 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16498592_15704118.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:15:54 Heat of formation + Delta-G solvation = -81.873624 kcal Electronic energy + Delta-G solvation = -31230.265383 eV Core-core repulsion = 26622.536427 eV Total energy + Delta-G solvation = -4607.728957 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.151 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -48.92989 -41.85107 -40.87256 -40.00645 -38.35113 -37.89890 -36.76083 -35.70534 -34.77327 -31.91331 -30.23490 -28.39983 -28.33551 -27.87544 -27.08635 -26.30920 -24.46286 -23.49667 -22.47273 -21.35213 -20.87943 -20.50903 -19.88362 -19.14544 -18.45147 -17.85249 -17.68628 -17.38436 -17.25108 -16.91251 -16.58346 -16.41412 -16.06259 -15.77528 -15.70391 -15.54198 -15.45562 -15.32080 -14.99753 -14.64450 -14.48962 -14.38725 -14.28190 -13.98495 -13.74758 -13.42873 -13.37809 -13.14937 -12.94828 -12.92390 -12.89938 -12.58777 -12.55773 -12.39203 -12.25548 -12.15816 -12.11769 -11.59420 -11.45577 -11.41840 -11.24326 -11.13265 -10.83627 -10.45097 -10.26051 -10.25209 -8.91767 -5.20066 -0.22977 -0.09494 0.48710 1.13057 1.22912 1.56059 1.71604 1.82406 1.91198 1.93675 2.96918 3.04188 3.12759 3.19758 3.38294 3.50054 3.52298 3.62092 3.71203 3.76328 3.91309 3.95981 3.99905 4.18905 4.31314 4.46075 4.46660 4.49468 4.57857 4.58244 4.60775 4.61424 4.68022 4.70208 4.73306 4.79632 4.82477 4.84463 4.85295 4.93087 4.95959 5.04316 5.18398 5.23882 5.29498 5.35646 5.55410 5.59985 5.89749 6.34028 6.78330 6.91520 7.29352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.642 3.358 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.150 3.850 10 C -0.111 4.111 11 H 0.112 0.888 12 C -0.131 4.131 13 C 0.080 3.920 14 F -0.196 7.196 15 C 0.130 3.870 16 N -0.685 5.685 17 C 0.326 3.674 18 N -0.568 5.568 19 C 0.111 3.889 20 C -0.272 4.272 21 C -0.023 4.023 22 O -0.563 6.563 23 Si 0.755 3.245 24 S 0.053 5.947 25 C -0.145 4.145 26 H 0.062 0.938 27 H 0.087 0.913 28 H 0.063 0.937 29 H 0.069 0.931 30 H 0.098 0.902 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.086 0.914 34 H 0.061 0.939 35 H 0.416 0.584 36 H 0.073 0.927 37 H 0.071 0.929 38 H 0.122 0.878 39 H 0.094 0.906 40 H 0.094 0.906 41 H 0.075 0.925 42 H 0.422 0.578 43 H 0.193 0.807 44 H 0.108 0.892 45 H 0.405 0.595 46 H -0.285 1.285 47 H -0.276 1.276 48 H 0.088 0.912 49 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.663 -0.671 1.443 3.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.028 3.972 10 C -0.129 4.129 11 H 0.130 0.870 12 C -0.170 4.170 13 C 0.061 3.939 14 F -0.177 7.177 15 C 0.004 3.996 16 N -0.326 5.326 17 C -0.045 4.045 18 N -0.294 5.294 19 C -0.039 4.039 20 C -0.394 4.394 21 C -0.136 4.136 22 O -0.374 6.374 23 Si 0.660 3.340 24 S 0.301 5.699 25 C -0.182 4.182 26 H 0.081 0.919 27 H 0.105 0.895 28 H 0.082 0.918 29 H 0.088 0.912 30 H 0.117 0.883 31 H 0.088 0.912 32 H 0.082 0.918 33 H 0.105 0.895 34 H 0.080 0.920 35 H 0.253 0.747 36 H 0.091 0.909 37 H 0.090 0.910 38 H 0.141 0.859 39 H 0.113 0.887 40 H 0.112 0.888 41 H 0.093 0.907 42 H 0.261 0.739 43 H 0.210 0.790 44 H 0.126 0.874 45 H 0.257 0.743 46 H -0.212 1.212 47 H -0.203 1.203 48 H 0.107 0.893 49 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 2.186 0.815 1.723 2.900 hybrid contribution -0.444 -0.164 0.010 0.473 sum 1.742 0.651 1.733 2.542 Atomic orbital electron populations 1.22473 0.94006 1.03702 1.03524 1.22356 0.94493 0.92584 0.81522 1.21892 1.02435 0.90902 1.04255 1.22470 1.01605 1.02264 0.97362 1.86309 1.71557 1.23366 1.47267 1.18367 0.78797 0.80797 0.82557 1.90912 1.42312 1.71018 1.44335 1.44726 1.55255 1.12875 1.23192 1.21371 1.00157 0.78290 0.97363 1.22701 0.95743 0.97060 0.97412 0.87016 1.23560 0.94050 0.95450 1.03909 1.22155 0.99769 0.94486 0.77524 1.92857 1.95594 1.94468 1.34772 1.21926 0.82317 0.95460 0.99901 1.43925 1.18550 1.13618 1.56476 1.23911 0.93689 0.91729 0.95169 1.66485 1.35970 1.02222 1.24751 1.21626 0.88609 0.96499 0.97166 1.24676 1.02437 0.99217 1.13098 1.23832 0.99127 0.98255 0.92372 1.86465 1.58409 1.65487 1.27007 0.94226 0.81459 0.83126 0.75220 1.84183 1.16661 1.14922 1.54133 1.23808 0.97886 0.96146 1.00404 0.91945 0.89461 0.91765 0.91217 0.88306 0.91185 0.91755 0.89471 0.91983 0.74692 0.90859 0.91043 0.85950 0.88744 0.88762 0.90704 0.73873 0.79038 0.87398 0.74321 1.21159 1.20251 0.89324 0.87042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.59 8.37 71.98 0.60 0.01 16 2 C 0.13 0.38 1.13 -10.79 -0.01 0.37 16 3 C -0.14 0.27 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.60 8.37 71.98 0.60 0.01 16 5 O -0.37 -2.00 9.94 -55.48 -0.55 -2.55 16 6 C 0.64 3.99 8.06 129.79 1.05 5.04 16 7 O -0.59 -6.93 11.88 19.81 0.24 -6.69 16 8 N -0.70 0.56 5.56 -590.85 -3.29 -2.72 16 9 C 0.15 -0.54 5.51 86.38 0.48 -0.06 16 10 C -0.11 0.81 3.73 -10.26 -0.04 0.77 16 11 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 12 C -0.13 0.96 7.10 31.12 0.22 1.18 16 13 C 0.08 -0.36 1.74 -10.27 -0.02 -0.38 16 14 F -0.20 -0.04 16.58 44.97 0.75 0.70 16 15 C 0.13 -0.22 5.70 86.38 0.49 0.27 16 16 N -0.69 -1.08 5.61 -351.03 -1.97 -3.05 16 17 C 0.33 2.15 8.09 179.32 1.45 3.60 16 18 N -0.57 -5.02 10.14 -202.03 -2.05 -7.07 16 19 C 0.11 0.77 11.24 83.54 0.94 1.71 16 20 C -0.27 -1.66 5.76 24.58 0.14 -1.52 16 21 C -0.02 0.01 2.98 71.24 0.21 0.22 16 22 O -0.56 0.20 12.86 -148.98 -1.92 -1.72 16 23 Si 0.76 -0.86 31.07 68.60 2.13 1.27 16 24 S 0.05 0.35 20.59 -56.49 -1.16 -0.81 16 25 C -0.14 1.00 7.08 31.12 0.22 1.22 16 26 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 27 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 28 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 29 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 31 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 33 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 35 H 0.42 -2.07 8.58 -92.71 -0.80 -2.86 16 36 H 0.07 -0.18 7.85 -2.38 -0.02 -0.20 16 37 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.12 -1.17 8.06 -2.38 -0.02 -1.19 16 39 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 40 H 0.09 -0.21 7.84 -2.39 -0.02 -0.23 16 41 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 42 H 0.42 -0.36 8.15 -92.70 -0.76 -1.11 16 43 H 0.19 0.53 8.06 -2.91 -0.02 0.51 16 44 H 0.11 -0.57 7.96 -2.39 -0.02 -0.59 16 45 H 0.41 -4.58 8.74 -74.06 -0.65 -5.23 16 46 H -0.28 -1.84 7.11 99.48 0.71 -1.14 16 47 H -0.28 -1.18 7.11 99.48 0.71 -0.48 16 48 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 49 H 0.11 -0.83 7.66 -2.39 -0.02 -0.84 16 Total: 0.00 -22.58 414.51 -2.01 -24.59 By element: Atomic # 1 Polarization: -14.15 SS G_CDS: -1.16 Total: -15.31 kcal Atomic # 6 Polarization: 6.38 SS G_CDS: 6.97 Total: 13.35 kcal Atomic # 7 Polarization: -5.54 SS G_CDS: -7.30 Total: -12.84 kcal Atomic # 8 Polarization: -8.73 SS G_CDS: -2.23 Total: -10.96 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.75 Total: 0.70 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: 2.13 Total: 1.27 kcal Atomic # 16 Polarization: 0.35 SS G_CDS: -1.16 Total: -0.81 kcal Total: -22.58 -2.01 -24.59 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16498592_15704118.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.283 kcal (2) G-P(sol) polarization free energy of solvation -22.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds