Wall clock time and date at job start Thu Mar 4 2021 13:16:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 H 1.09004 * 112.85025 * 334.94284 * 9 8 6 11 11 C 1.53777 * 113.61716 * 106.14251 * 9 8 6 12 12 C 1.53950 * 87.02326 * 139.95030 * 11 9 8 13 13 F 1.39899 * 113.61129 * 89.20124 * 12 11 9 14 14 C 1.53002 * 113.66691 * 220.06834 * 12 11 9 15 15 N 1.46495 * 109.47115 * 277.55641 * 14 12 11 16 16 C 1.38406 * 120.00079 * 179.97438 * 15 14 12 17 17 N 1.32493 * 119.21680 * 359.73313 * 16 15 14 18 18 C 1.32275 * 120.74121 * 179.71618 * 17 16 15 19 19 C 1.38602 * 119.19706 * 0.54863 * 18 17 16 20 20 C 1.50699 * 120.72293 * 179.70751 * 19 18 17 21 21 O 1.42894 * 109.47355 * 245.02286 * 20 19 18 22 22 Si 1.86306 * 109.47177 * 5.02360 * 20 19 18 23 23 C 1.38601 * 118.55856 * 359.72613 * 19 18 17 24 24 N 1.32279 * 119.20036 * 0.02562 * 23 19 18 25 25 C 1.53779 * 87.10991 * 334.63899 * 12 11 9 26 26 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 27 27 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 28 28 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 31 31 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 32 32 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 33 33 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 34 34 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 35 35 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 36 36 H 1.08996 * 113.61392 * 254.53373 * 11 9 8 37 37 H 1.09007 * 113.61140 * 25.42982 * 11 9 8 38 38 H 1.08997 * 109.47144 * 37.55944 * 14 12 11 39 39 H 1.09003 * 109.46490 * 157.56040 * 14 12 11 40 40 H 0.97000 * 120.00245 * 0.02562 * 15 14 12 41 41 H 1.08003 * 120.40191 * 180.29890 * 18 17 16 42 42 H 1.09004 * 109.47421 * 125.01794 * 20 19 18 43 43 H 0.96700 * 114.00551 * 59.99753 * 21 20 19 44 44 H 1.48496 * 109.99999 * 58.67663 * 22 20 19 45 45 H 1.48489 * 110.00072 * 180.02562 * 22 20 19 46 46 H 1.07998 * 120.40613 * 179.97438 * 23 19 18 47 47 H 1.08996 * 113.61654 * 270.80826 * 25 12 11 48 48 H 1.09006 * 113.68763 * 139.92279 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 1 0.7409 -4.3064 2.0685 11 6 2.8044 -5.0663 2.3136 12 6 2.2800 -5.8662 3.5199 13 9 1.3034 -6.8101 3.1845 14 6 3.3883 -6.4456 4.4014 15 7 3.8713 -7.6994 3.8177 16 6 4.8810 -8.4101 4.4430 17 7 5.4033 -7.9395 5.5660 18 6 6.3657 -8.5969 6.1916 19 6 6.8340 -9.7847 5.6525 20 6 7.9338 -10.5583 6.3331 21 8 9.0918 -10.5765 5.4961 22 14 8.3531 -9.7446 7.9557 23 6 6.2692 -10.2455 4.4736 24 7 5.3063 -9.5420 3.9013 25 6 1.7019 -4.5425 4.0475 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2075 -2.1392 34 1 3.1300 -0.7209 -1.2494 35 1 2.6276 -2.2368 3.0830 36 1 2.7049 -5.5914 1.3637 37 1 3.8001 -4.6494 2.4657 38 1 4.2113 -5.7337 4.4651 39 1 2.9954 -6.6372 5.3999 40 1 3.4839 -8.0312 2.9926 41 1 6.7842 -8.2106 7.1092 42 1 7.6006 -11.5802 6.5146 43 1 9.4439 -9.6992 5.2926 44 1 7.1489 -9.6908 8.8230 45 1 9.4368 -10.4976 8.6364 46 1 6.6117 -11.1674 4.0272 47 1 2.3955 -3.9822 4.6745 48 1 0.7135 -4.6441 4.4958 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_16499082_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:16:07 Heat of formation + Delta-G solvation = -69.701703 kcal Electronic energy + Delta-G solvation = -31291.505332 eV Core-core repulsion = 26685.263651 eV Total energy + Delta-G solvation = -4606.241681 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.174 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -48.95787 -42.10112 -41.80475 -40.08672 -38.31272 -37.83047 -36.71077 -35.28473 -34.73612 -34.10920 -32.59489 -29.17871 -28.34608 -28.30582 -27.33756 -26.38820 -25.88700 -24.59873 -23.16213 -22.50813 -21.48753 -20.81247 -19.57376 -19.16169 -18.78557 -18.22596 -17.80706 -17.26964 -17.17705 -17.04741 -16.71091 -16.40190 -16.15371 -16.05188 -15.71568 -15.55276 -15.37916 -15.27914 -15.25660 -14.72959 -14.58271 -14.45472 -14.15122 -14.09406 -13.82098 -13.43626 -13.38756 -13.20579 -13.04360 -12.94814 -12.84913 -12.83389 -12.39372 -12.26733 -12.25473 -11.90194 -11.85591 -11.78889 -11.73187 -11.36312 -11.32385 -11.00683 -10.62353 -10.29029 -10.05372 -9.18669 -5.14162 0.03012 0.12916 1.11316 1.19678 1.54014 1.65456 1.81460 1.90461 2.78235 2.78550 2.85760 2.94847 3.11857 3.16933 3.35944 3.37934 3.42914 3.58566 3.67551 3.75470 3.75855 3.81224 3.95212 4.07433 4.16288 4.18345 4.26934 4.38922 4.42845 4.47699 4.54400 4.56222 4.61452 4.66890 4.67697 4.71094 4.76597 4.84859 4.91358 4.95581 5.06852 5.13393 5.20651 5.34838 5.42565 5.55670 5.67252 5.92719 6.32184 6.33349 6.49098 7.23763 7.36517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.651 3.349 7 O -0.563 6.563 8 N -0.701 5.701 9 C 0.146 3.854 10 H 0.127 0.873 11 C -0.168 4.168 12 C 0.084 3.916 13 F -0.180 7.180 14 C 0.134 3.866 15 N -0.694 5.694 16 C 0.569 3.431 17 N -0.564 5.564 18 C 0.201 3.799 19 C -0.293 4.293 20 C -0.046 4.046 21 O -0.540 6.540 22 Si 0.680 3.320 23 C 0.224 3.776 24 N -0.566 5.566 25 C -0.154 4.154 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.408 0.592 36 H 0.092 0.908 37 H 0.108 0.892 38 H 0.091 0.909 39 H 0.083 0.917 40 H 0.419 0.581 41 H 0.167 0.833 42 H 0.116 0.884 43 H 0.379 0.621 44 H -0.255 1.255 45 H -0.251 1.251 46 H 0.171 0.829 47 H 0.112 0.888 48 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.736 4.853 2.327 6.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.405 3.595 7 O -0.452 6.452 8 N -0.360 5.360 9 C 0.041 3.959 10 H 0.145 0.855 11 C -0.207 4.207 12 C 0.064 3.936 13 F -0.160 7.160 14 C 0.009 3.991 15 N -0.331 5.331 16 C 0.212 3.788 17 N -0.286 5.286 18 C 0.033 3.967 19 C -0.302 4.302 20 C -0.159 4.159 21 O -0.345 6.345 22 Si 0.582 3.418 23 C 0.056 3.944 24 N -0.288 5.288 25 C -0.193 4.193 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.244 0.756 36 H 0.110 0.890 37 H 0.126 0.874 38 H 0.109 0.891 39 H 0.101 0.899 40 H 0.257 0.743 41 H 0.184 0.816 42 H 0.133 0.867 43 H 0.226 0.774 44 H -0.180 1.180 45 H -0.175 1.175 46 H 0.188 0.812 47 H 0.131 0.869 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.450 4.650 2.351 5.408 hybrid contribution 0.260 -0.946 0.003 0.981 sum 1.710 3.704 2.354 4.710 Atomic orbital electron populations 1.22525 0.93804 1.05061 1.02769 1.22135 0.94472 0.91570 0.81807 1.21881 1.02339 0.92310 1.03375 1.22524 1.01609 1.03451 0.96559 1.86309 1.71457 1.23329 1.46793 1.18147 0.78568 0.80614 0.82205 1.90933 1.40769 1.70509 1.42983 1.44635 1.55413 1.11953 1.23966 1.22458 0.99182 0.77960 0.96282 0.85543 1.24265 1.00591 0.96962 0.98899 1.21857 0.87331 0.86951 0.97416 1.92918 1.63685 1.66111 1.93298 1.21714 0.95235 0.85458 0.96682 1.43892 1.37255 1.23748 1.28244 1.19299 0.87281 0.86087 0.86123 1.67890 1.14678 1.35866 1.10171 1.22756 0.88727 0.88980 0.96222 1.21723 1.05664 1.00927 1.01860 1.24709 0.84705 1.03587 1.02873 1.86516 1.42881 1.34137 1.70997 0.95043 0.82176 0.88854 0.75756 1.22859 0.86144 0.96274 0.89121 1.67984 1.17051 1.07938 1.35804 1.23976 1.04224 0.94009 0.97123 0.92090 0.90881 0.89438 0.91381 0.89896 0.91374 0.89433 0.90891 0.92105 0.75632 0.88977 0.87373 0.89070 0.89898 0.74267 0.81601 0.86677 0.77371 1.17978 1.17501 0.81200 0.86928 0.88334 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.13 1.13 -90.62 -0.10 0.02 16 3 C -0.14 0.15 8.85 37.16 0.33 0.48 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 5 O -0.36 -0.64 9.94 -40.31 -0.40 -1.04 16 6 C 0.65 1.34 8.06 54.06 0.44 1.77 16 7 O -0.56 -2.60 11.50 -19.28 -0.22 -2.83 16 8 N -0.70 0.91 5.37 -57.93 -0.31 0.59 16 9 C 0.15 -0.25 4.19 -67.12 -0.28 -0.53 16 10 H 0.13 0.04 7.50 -51.93 -0.39 -0.35 16 11 C -0.17 0.40 7.34 -25.83 -0.19 0.21 16 12 C 0.08 -0.19 1.67 -89.72 -0.15 -0.34 16 13 F -0.18 -0.11 16.80 2.25 0.04 -0.08 16 14 C 0.13 -0.26 5.34 -4.04 -0.02 -0.28 16 15 N -0.69 -0.18 5.62 -62.31 -0.35 -0.53 16 16 C 0.57 1.20 8.43 -322.80 -2.72 -1.52 16 17 N -0.56 -0.80 9.59 -13.93 -0.13 -0.93 16 18 C 0.20 -0.08 9.92 -17.23 -0.17 -0.25 16 19 C -0.29 0.15 5.36 -104.35 -0.56 -0.41 16 20 C -0.05 0.07 2.83 36.01 0.10 0.17 16 21 O -0.54 0.55 12.85 -35.23 -0.45 0.10 16 22 Si 0.68 -1.57 29.89 -169.99 -5.08 -6.65 16 23 C 0.22 0.19 10.99 -17.23 -0.19 0.00 16 24 N -0.57 -1.50 10.46 -13.93 -0.15 -1.65 16 25 C -0.15 0.58 7.28 -25.92 -0.19 0.39 16 26 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.41 -1.50 8.82 -40.82 -0.36 -1.86 16 36 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.11 -0.37 7.97 -51.92 -0.41 -0.78 16 38 H 0.09 -0.27 7.95 -51.93 -0.41 -0.68 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.42 0.07 8.30 -40.82 -0.34 -0.27 16 41 H 0.17 -0.53 5.07 -52.48 -0.27 -0.80 16 42 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 43 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 44 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 45 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 46 H 0.17 -0.15 8.06 -52.49 -0.42 -0.57 16 47 H 0.11 -0.66 8.07 -51.93 -0.42 -1.08 16 48 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 LS Contribution 395.92 15.07 5.97 5.97 Total: 0.00 -8.84 395.92 -11.25 -20.09 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -7.08 Total: -13.00 kcal Atomic # 6 Polarization: 3.04 SS G_CDS: -3.08 Total: -0.04 kcal Atomic # 7 Polarization: -1.58 SS G_CDS: -0.94 Total: -2.52 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -1.07 Total: -3.77 kcal Atomic # 9 Polarization: -0.11 SS G_CDS: 0.04 Total: -0.08 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.08 Total: -6.65 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.84 -11.25 -20.09 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16499082_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.608 kcal (2) G-P(sol) polarization free energy of solvation -8.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds