Wall clock time and date at job start Thu Mar 4 2021 13:16:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 H 1.09004 * 112.85025 * 334.94284 * 9 8 6 11 11 C 1.53777 * 113.61716 * 106.14251 * 9 8 6 12 12 C 1.53950 * 87.02326 * 139.95030 * 11 9 8 13 13 F 1.39899 * 113.61129 * 89.20124 * 12 11 9 14 14 C 1.53002 * 113.66691 * 220.06834 * 12 11 9 15 15 N 1.46495 * 109.47115 * 277.55641 * 14 12 11 16 16 C 1.38406 * 120.00079 * 179.97438 * 15 14 12 17 17 N 1.32493 * 119.21680 * 359.73313 * 16 15 14 18 18 C 1.32275 * 120.74121 * 179.71618 * 17 16 15 19 19 C 1.38602 * 119.19706 * 0.54863 * 18 17 16 20 20 C 1.50699 * 120.72293 * 179.70751 * 19 18 17 21 21 O 1.42894 * 109.47355 * 245.02286 * 20 19 18 22 22 Si 1.86306 * 109.47177 * 5.02360 * 20 19 18 23 23 C 1.38601 * 118.55856 * 359.72613 * 19 18 17 24 24 N 1.32279 * 119.20036 * 0.02562 * 23 19 18 25 25 C 1.53779 * 87.10991 * 334.63899 * 12 11 9 26 26 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 27 27 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 28 28 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 31 31 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 32 32 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 33 33 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 34 34 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 35 35 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 36 36 H 1.08996 * 113.61392 * 254.53373 * 11 9 8 37 37 H 1.09007 * 113.61140 * 25.42982 * 11 9 8 38 38 H 1.08997 * 109.47144 * 37.55944 * 14 12 11 39 39 H 1.09003 * 109.46490 * 157.56040 * 14 12 11 40 40 H 0.97000 * 120.00245 * 0.02562 * 15 14 12 41 41 H 1.08003 * 120.40191 * 180.29890 * 18 17 16 42 42 H 1.09004 * 109.47421 * 125.01794 * 20 19 18 43 43 H 0.96700 * 114.00551 * 59.99753 * 21 20 19 44 44 H 1.48496 * 109.99999 * 58.67663 * 22 20 19 45 45 H 1.48489 * 110.00072 * 180.02562 * 22 20 19 46 46 H 1.07998 * 120.40613 * 179.97438 * 23 19 18 47 47 H 1.08996 * 113.61654 * 270.80826 * 25 12 11 48 48 H 1.09006 * 113.68763 * 139.92279 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 1 0.7409 -4.3064 2.0685 11 6 2.8044 -5.0663 2.3136 12 6 2.2800 -5.8662 3.5199 13 9 1.3034 -6.8101 3.1845 14 6 3.3883 -6.4456 4.4014 15 7 3.8713 -7.6994 3.8177 16 6 4.8810 -8.4101 4.4430 17 7 5.4033 -7.9395 5.5660 18 6 6.3657 -8.5969 6.1916 19 6 6.8340 -9.7847 5.6525 20 6 7.9338 -10.5583 6.3331 21 8 9.0918 -10.5765 5.4961 22 14 8.3531 -9.7446 7.9557 23 6 6.2692 -10.2455 4.4736 24 7 5.3063 -9.5420 3.9013 25 6 1.7019 -4.5425 4.0475 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2075 -2.1392 34 1 3.1300 -0.7209 -1.2494 35 1 2.6276 -2.2368 3.0830 36 1 2.7049 -5.5914 1.3637 37 1 3.8001 -4.6494 2.4657 38 1 4.2113 -5.7337 4.4651 39 1 2.9954 -6.6372 5.3999 40 1 3.4839 -8.0312 2.9926 41 1 6.7842 -8.2106 7.1092 42 1 7.6006 -11.5802 6.5146 43 1 9.4439 -9.6992 5.2926 44 1 7.1489 -9.6908 8.8230 45 1 9.4368 -10.4976 8.6364 46 1 6.6117 -11.1674 4.0272 47 1 2.3955 -3.9822 4.6745 48 1 0.7135 -4.6441 4.4958 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_16499082_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:16:06 Heat of formation + Delta-G solvation = -69.571092 kcal Electronic energy + Delta-G solvation = -31291.499668 eV Core-core repulsion = 26685.263651 eV Total energy + Delta-G solvation = -4606.236017 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.174 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -48.91288 -42.10388 -41.88673 -39.99811 -38.26036 -37.86418 -36.67554 -35.35868 -34.76144 -34.09973 -32.55235 -29.09716 -28.38833 -28.31271 -27.13342 -26.32333 -25.88028 -24.58411 -23.14680 -22.47355 -21.46225 -20.77268 -19.55127 -19.21193 -18.76435 -18.14688 -17.80727 -17.25716 -17.15408 -17.03887 -16.66837 -16.33042 -16.10876 -16.03637 -15.64218 -15.56442 -15.40547 -15.28135 -15.22092 -14.65351 -14.54898 -14.48736 -14.07510 -14.06675 -13.65364 -13.35921 -13.28038 -13.15494 -12.97514 -12.94933 -12.87988 -12.79644 -12.46702 -12.32049 -12.25494 -11.92790 -11.79833 -11.71595 -11.64222 -11.41616 -11.27158 -11.14818 -10.55065 -10.26127 -10.06013 -9.16077 -4.98220 0.03485 0.11901 1.10732 1.33417 1.66207 1.67609 1.72902 2.01527 2.77429 2.94339 2.99834 3.05426 3.17118 3.29507 3.51747 3.54493 3.58291 3.66693 3.70912 3.72513 3.78027 3.81776 3.92831 4.20293 4.23688 4.34165 4.50498 4.54684 4.56365 4.59388 4.59487 4.60796 4.71612 4.73750 4.74954 4.80075 4.84400 4.86441 4.86622 5.01449 5.13977 5.18813 5.25204 5.27606 5.37196 5.56291 5.68901 5.94902 6.30699 6.35957 6.80239 7.21438 7.30728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.367 6.367 6 C 0.643 3.357 7 O -0.595 6.595 8 N -0.685 5.685 9 C 0.139 3.861 10 H 0.101 0.899 11 C -0.161 4.161 12 C 0.083 3.917 13 F -0.199 7.199 14 C 0.138 3.862 15 N -0.695 5.695 16 C 0.553 3.447 17 N -0.571 5.571 18 C 0.198 3.802 19 C -0.287 4.287 20 C -0.050 4.050 21 O -0.555 6.555 22 Si 0.773 3.227 23 C 0.211 3.789 24 N -0.593 5.593 25 C -0.137 4.137 26 H 0.063 0.937 27 H 0.086 0.914 28 H 0.062 0.938 29 H 0.070 0.930 30 H 0.097 0.903 31 H 0.070 0.930 32 H 0.062 0.938 33 H 0.085 0.915 34 H 0.063 0.937 35 H 0.422 0.578 36 H 0.075 0.925 37 H 0.125 0.875 38 H 0.108 0.892 39 H 0.081 0.919 40 H 0.416 0.584 41 H 0.194 0.806 42 H 0.112 0.888 43 H 0.395 0.605 44 H -0.283 1.283 45 H -0.298 1.298 46 H 0.180 0.820 47 H 0.143 0.857 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.777 6.216 3.388 8.024 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.238 4.238 5 O -0.281 6.281 6 C 0.397 3.603 7 O -0.486 6.486 8 N -0.344 5.344 9 C 0.035 3.965 10 H 0.119 0.881 11 C -0.200 4.200 12 C 0.064 3.936 13 F -0.180 7.180 14 C 0.014 3.986 15 N -0.332 5.332 16 C 0.196 3.804 17 N -0.294 5.294 18 C 0.031 3.969 19 C -0.295 4.295 20 C -0.161 4.161 21 O -0.363 6.363 22 Si 0.679 3.321 23 C 0.044 3.956 24 N -0.315 5.315 25 C -0.175 4.175 26 H 0.082 0.918 27 H 0.104 0.896 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.116 0.884 31 H 0.089 0.911 32 H 0.081 0.919 33 H 0.104 0.896 34 H 0.082 0.918 35 H 0.260 0.740 36 H 0.094 0.906 37 H 0.143 0.857 38 H 0.126 0.874 39 H 0.099 0.901 40 H 0.254 0.746 41 H 0.210 0.790 42 H 0.129 0.871 43 H 0.245 0.755 44 H -0.210 1.210 45 H -0.225 1.225 46 H 0.197 0.803 47 H 0.161 0.839 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 2.504 6.035 3.410 7.370 hybrid contribution -0.034 -1.431 -0.327 1.468 sum 2.470 4.604 3.084 6.067 Atomic orbital electron populations 1.22478 0.94127 1.03634 1.03554 1.22348 0.94391 0.92625 0.81492 1.21891 1.02515 0.90779 1.04265 1.22475 1.01690 1.02186 0.97408 1.86313 1.71458 1.23157 1.47189 1.18434 0.78500 0.80764 0.82624 1.90922 1.42275 1.71094 1.44327 1.44580 1.54811 1.11844 1.23213 1.22426 0.98466 0.77803 0.97854 0.88135 1.24246 1.01125 0.96470 0.98200 1.21954 0.87025 0.87045 0.97589 1.92879 1.64554 1.67043 1.93514 1.21801 0.95560 0.84951 0.96294 1.44032 1.36855 1.24236 1.28100 1.19544 0.87862 0.86322 0.86642 1.67946 1.15250 1.36200 1.10043 1.23221 0.88139 0.88823 0.96764 1.21786 1.05527 1.00884 1.01295 1.24848 0.84379 1.03514 1.03363 1.86484 1.42872 1.35829 1.71099 0.93978 0.78085 0.87151 0.72933 1.23129 0.86073 0.96627 0.89778 1.67980 1.18085 1.08680 1.36790 1.23969 1.05019 0.92663 0.95879 0.91817 0.89552 0.91899 0.91072 0.88424 0.91068 0.91903 0.89571 0.91832 0.73967 0.90585 0.85683 0.87449 0.90065 0.74614 0.79002 0.87068 0.75511 1.20962 1.22539 0.80332 0.83859 0.88252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 2 C 0.13 0.27 1.13 -10.79 -0.01 0.26 16 3 C -0.14 0.41 8.85 71.98 0.64 1.05 16 4 C -0.18 -0.50 8.37 71.98 0.60 0.11 16 5 O -0.37 -1.43 9.94 -55.45 -0.55 -1.98 16 6 C 0.64 3.30 8.06 129.79 1.05 4.35 16 7 O -0.60 -6.81 11.50 19.80 0.23 -6.58 16 8 N -0.68 1.71 5.37 -567.61 -3.05 -1.34 16 9 C 0.14 -0.40 4.19 45.52 0.19 -0.21 16 10 H 0.10 0.28 7.50 -2.39 -0.02 0.26 16 11 C -0.16 0.70 7.34 31.18 0.23 0.93 16 12 C 0.08 -0.37 1.67 -10.21 -0.02 -0.38 16 13 F -0.20 -0.50 16.80 44.97 0.76 0.26 16 14 C 0.14 -0.60 5.34 86.38 0.46 -0.14 16 15 N -0.70 -0.70 5.62 -351.05 -1.97 -2.67 16 16 C 0.55 2.51 8.43 261.48 2.20 4.71 16 17 N -0.57 -1.31 9.59 -197.98 -1.90 -3.21 16 18 C 0.20 -0.34 9.92 84.71 0.84 0.50 16 19 C -0.29 0.40 5.36 -19.69 -0.11 0.29 16 20 C -0.05 0.18 2.83 71.24 0.20 0.38 16 21 O -0.56 1.49 12.85 -148.98 -1.91 -0.42 16 22 Si 0.77 -4.14 29.89 68.60 2.05 -2.09 16 23 C 0.21 0.44 10.99 84.71 0.93 1.37 16 24 N -0.59 -3.61 10.46 -197.99 -2.07 -5.68 16 25 C -0.14 1.14 7.28 31.12 0.23 1.36 16 26 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 27 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 28 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 29 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 30 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 33 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 35 H 0.42 -3.54 8.82 -92.71 -0.82 -4.36 16 36 H 0.08 -0.06 8.14 -2.39 -0.02 -0.07 16 37 H 0.12 -0.97 7.97 -2.38 -0.02 -0.99 16 38 H 0.11 -0.80 7.95 -2.39 -0.02 -0.82 16 39 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.42 0.66 8.30 -92.71 -0.77 -0.11 16 41 H 0.19 -1.57 5.07 -2.91 -0.01 -1.58 16 42 H 0.11 -0.31 7.96 -2.38 -0.02 -0.33 16 43 H 0.39 -4.13 8.70 -74.06 -0.64 -4.77 16 44 H -0.28 0.17 7.11 99.48 0.71 0.88 16 45 H -0.30 -0.79 7.11 99.48 0.71 -0.09 16 46 H 0.18 -0.19 8.06 -2.91 -0.02 -0.22 16 47 H 0.14 -2.06 8.07 -2.39 -0.02 -2.08 16 48 H 0.10 -0.76 8.14 -2.38 -0.02 -0.78 16 Total: 0.00 -22.88 395.92 -1.55 -24.43 By element: Atomic # 1 Polarization: -14.21 SS G_CDS: -1.17 Total: -15.38 kcal Atomic # 6 Polarization: 6.64 SS G_CDS: 8.04 Total: 14.68 kcal Atomic # 7 Polarization: -3.91 SS G_CDS: -8.99 Total: -12.90 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -2.24 Total: -8.99 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.76 Total: 0.26 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.05 Total: -2.09 kcal Total: -22.88 -1.55 -24.43 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16499082_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.143 kcal (2) G-P(sol) polarization free energy of solvation -22.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds