Wall clock time and date at job start Thu Mar 4 2021 13:16:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47306 * 2 1 4 4 C 1.53005 * 109.46668 * 240.00185 * 2 1 3 5 5 O 1.45201 * 109.47356 * 120.00695 * 2 1 3 6 6 C 1.34635 * 117.00218 * 59.99313 * 5 2 1 7 7 O 1.21514 * 119.99998 * 0.02562 * 6 5 2 8 8 N 1.34778 * 120.00039 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99695 * 180.02562 * 8 6 5 10 10 H 1.08997 * 112.85121 * 336.19205 * 9 8 6 11 11 C 1.53782 * 113.61521 * 107.50744 * 9 8 6 12 12 C 1.53784 * 87.07947 * 139.97707 * 11 9 8 13 13 F 1.39902 * 113.69123 * 89.12631 * 12 11 9 14 14 C 1.52999 * 113.61296 * 220.01541 * 12 11 9 15 15 N 1.46501 * 109.47482 * 277.50075 * 14 12 11 16 16 C 1.39134 * 120.00430 * 179.97438 * 15 14 12 17 17 N 1.32344 * 119.71833 * 0.02562 * 16 15 14 18 18 C 1.32004 * 121.64770 * 179.72079 * 17 16 15 19 19 C 1.37986 * 120.90365 * 0.02562 * 18 17 16 20 20 C 1.50698 * 120.32632 * 179.97438 * 19 18 17 21 21 O 1.42906 * 109.46849 * 244.99532 * 20 19 18 22 22 Si 1.86300 * 109.47324 * 4.99524 * 20 19 18 23 23 C 1.38908 * 119.34591 * 359.97438 * 19 18 17 24 24 C 1.38445 * 118.48365 * 0.02562 * 23 19 18 25 25 F 1.35098 * 120.47108 * 179.97438 * 24 23 19 26 26 C 1.53782 * 87.08383 * 334.56493 * 12 11 9 27 27 H 1.08994 * 109.46761 * 299.99469 * 1 2 3 28 28 H 1.09000 * 109.47357 * 59.99519 * 1 2 3 29 29 H 1.09000 * 109.47302 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47319 * 179.97438 * 3 2 1 31 31 H 1.09000 * 109.47305 * 300.00513 * 3 2 1 32 32 H 1.09010 * 109.46622 * 60.00374 * 3 2 1 33 33 H 1.08993 * 109.47457 * 299.99840 * 4 2 1 34 34 H 1.09005 * 109.47137 * 60.00549 * 4 2 1 35 35 H 1.09003 * 109.46456 * 179.97438 * 4 2 1 36 36 H 0.96991 * 119.99888 * 0.02562 * 8 6 5 37 37 H 1.08993 * 113.61516 * 25.43003 * 11 9 8 38 38 H 1.09000 * 113.60787 * 254.52599 * 11 9 8 39 39 H 1.08997 * 109.47546 * 157.49794 * 14 12 11 40 40 H 1.09006 * 109.47216 * 37.49925 * 14 12 11 41 41 H 0.97008 * 119.99346 * 0.02562 * 15 14 12 42 42 H 1.08000 * 119.54737 * 180.02562 * 18 17 16 43 43 H 1.08999 * 109.47118 * 124.99624 * 20 19 18 44 44 H 0.96700 * 113.99653 * 59.99872 * 21 20 19 45 45 H 1.48501 * 109.99966 * 180.02562 * 22 20 19 46 46 H 1.48500 * 109.99731 * 301.32197 * 22 20 19 47 47 H 1.07994 * 120.75629 * 180.02562 * 23 19 18 48 48 H 1.09002 * 113.61502 * 139.98174 * 26 12 11 49 49 H 1.08994 * 113.61380 * 270.80121 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0141 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9515 -2.5097 0.5035 8 7 2.0681 -2.6659 2.4165 9 6 1.6748 -4.0674 2.5823 10 1 0.7604 -4.3169 2.0442 11 6 2.8233 -5.0619 2.3436 12 6 2.2752 -5.8604 3.5381 13 9 1.3129 -6.8122 3.1840 14 6 3.3662 -6.4287 4.4478 15 7 3.8711 -7.6817 3.8810 16 6 4.8757 -8.3868 4.5363 17 7 5.3709 -7.9207 5.6716 18 6 6.3206 -8.5611 6.3277 19 6 6.8354 -9.7486 5.8492 20 6 7.9198 -10.4687 6.6085 21 8 9.1167 -10.4860 5.8280 22 14 8.2409 -9.5874 8.2182 23 6 6.3441 -10.2738 4.6608 24 6 5.3482 -9.5804 3.9943 25 9 4.8417 -10.0543 2.8350 26 6 1.6762 -4.5383 4.0463 27 1 -0.3632 0.5137 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9563 -0.8899 32 1 1.6767 1.9562 0.8901 33 1 1.6766 -1.7488 -1.2494 34 1 1.6766 -0.2073 -2.1393 35 1 3.1299 -0.7208 -1.2495 36 1 2.6278 -2.2371 3.0825 37 1 3.8118 -4.6375 2.5187 38 1 2.7512 -5.5921 1.3939 39 1 2.9514 -6.6188 5.4377 40 1 4.1828 -5.7111 4.5278 41 1 3.5053 -8.0194 3.0484 42 1 6.6999 -8.1501 7.2516 43 1 7.6034 -11.4918 6.8113 44 1 9.4565 -9.6074 5.6094 45 1 9.3089 -10.2874 8.9762 46 1 8.6422 -8.1819 7.9564 47 1 6.7302 -11.2018 4.2657 48 1 0.6782 -4.6459 4.4713 49 1 2.3506 -3.9716 4.6881 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_16499082_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:16:21 Heat of formation + Delta-G solvation = -131.128329 kcal Electronic energy + Delta-G solvation = -33820.918059 eV Core-core repulsion = 28807.984655 eV Total energy + Delta-G solvation = -5012.933404 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.169 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -49.88341 -48.95566 -41.81648 -41.43797 -40.08265 -38.36246 -37.82706 -36.65082 -35.28877 -34.11938 -33.28843 -31.89325 -29.01671 -28.35076 -28.31057 -27.33256 -26.36047 -25.30540 -24.20021 -22.95990 -22.47811 -21.49678 -20.81068 -19.56451 -19.16518 -18.62306 -18.43093 -17.92791 -17.59418 -17.28180 -17.17313 -17.00785 -16.95717 -16.43690 -16.23673 -16.02435 -15.78625 -15.53437 -15.45326 -15.36530 -15.27707 -15.14657 -14.54155 -14.40152 -14.38002 -14.05011 -13.99073 -13.76865 -13.45390 -13.43677 -13.38821 -13.04373 -12.95966 -12.85387 -12.84034 -12.71873 -12.39631 -12.27124 -12.07552 -11.82612 -11.73479 -11.36572 -11.32884 -11.01187 -10.83063 -10.68845 -10.59325 -10.29250 -8.84779 -5.03897 -0.10769 0.07950 1.11113 1.18576 1.50178 1.76697 1.83030 1.89515 2.50616 2.79164 2.84911 2.96501 3.01784 3.16433 3.23335 3.31588 3.36228 3.44485 3.52311 3.75142 3.79763 3.80727 3.94738 3.95971 4.08323 4.18336 4.26772 4.38310 4.40399 4.42850 4.47497 4.54062 4.56419 4.60969 4.66883 4.66931 4.69686 4.76112 4.84520 4.90872 4.93965 4.95871 5.06425 5.20137 5.27975 5.34349 5.42101 5.55238 5.81058 6.06233 6.32514 6.32843 6.87357 7.35965 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.146 3.854 10 H 0.128 0.872 11 C -0.169 4.169 12 C 0.083 3.917 13 F -0.180 7.180 14 C 0.130 3.870 15 N -0.716 5.716 16 C 0.391 3.609 17 N -0.513 5.513 18 C 0.146 3.854 19 C -0.206 4.206 20 C -0.062 4.062 21 O -0.530 6.530 22 Si 0.684 3.316 23 C -0.037 4.037 24 C -0.017 4.017 25 F -0.132 7.132 26 C -0.155 4.155 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.408 0.592 37 H 0.108 0.892 38 H 0.091 0.909 39 H 0.083 0.917 40 H 0.089 0.911 41 H 0.417 0.583 42 H 0.164 0.836 43 H 0.120 0.880 44 H 0.376 0.624 45 H -0.254 1.254 46 H -0.256 1.256 47 H 0.150 0.850 48 H 0.098 0.902 49 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.595 3.271 3.596 4.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.405 3.595 7 O -0.452 6.452 8 N -0.360 5.360 9 C 0.041 3.959 10 H 0.145 0.855 11 C -0.208 4.208 12 C 0.064 3.936 13 F -0.160 7.160 14 C 0.006 3.994 15 N -0.350 5.350 16 C 0.152 3.848 17 N -0.230 5.230 18 C -0.011 4.011 19 C -0.211 4.211 20 C -0.173 4.173 21 O -0.336 6.336 22 Si 0.585 3.415 23 C -0.063 4.063 24 C -0.043 4.043 25 F -0.111 7.111 26 C -0.194 4.194 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.244 0.756 37 H 0.126 0.874 38 H 0.109 0.891 39 H 0.101 0.899 40 H 0.107 0.893 41 H 0.254 0.746 42 H 0.181 0.819 43 H 0.138 0.862 44 H 0.224 0.776 45 H -0.178 1.178 46 H -0.181 1.181 47 H 0.168 0.832 48 H 0.116 0.884 49 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 0.279 3.805 4.013 5.537 hybrid contribution 0.872 -0.549 -1.658 1.952 sum 1.151 3.256 2.355 4.180 Atomic orbital electron populations 1.22525 0.93788 1.05063 1.02776 1.22136 0.94484 0.91567 0.81803 1.21881 1.02332 0.92311 1.03382 1.22525 1.01600 1.03452 0.96567 1.86307 1.71432 1.23343 1.46810 1.18149 0.78574 0.80620 0.82188 1.90932 1.40815 1.70506 1.42956 1.44635 1.55503 1.11840 1.23974 1.22469 0.99043 0.77923 0.96455 0.85469 1.24239 1.00436 0.97107 0.99034 1.21827 0.87767 0.86839 0.97186 1.92914 1.64676 1.65597 1.92861 1.21698 0.95085 0.85974 0.96676 1.44318 1.38869 1.24591 1.27194 1.18378 0.88990 0.87637 0.89756 1.67296 1.14424 1.34258 1.07051 1.22391 0.90618 0.90523 0.97547 1.20870 1.03233 0.98686 0.98356 1.24841 0.83633 1.06539 1.02277 1.86623 1.40763 1.33717 1.72475 0.95065 0.89129 0.78473 0.78821 1.21304 0.92261 0.99457 0.93323 1.17994 1.02078 0.96525 0.87707 1.91505 1.86230 1.87956 1.45407 1.23983 1.04138 0.94114 0.97127 0.92081 0.90873 0.89438 0.91393 0.89887 0.91367 0.89434 0.90882 0.92124 0.75644 0.87407 0.89068 0.89862 0.89287 0.74565 0.81917 0.86185 0.77602 1.17829 1.18110 0.83224 0.88355 0.86966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 2 C 0.14 0.14 1.13 -90.62 -0.10 0.04 16 3 C -0.14 0.14 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.69 9.94 -40.31 -0.40 -1.09 16 6 C 0.65 1.42 8.06 54.06 0.44 1.86 16 7 O -0.56 -2.66 11.48 -19.28 -0.22 -2.88 16 8 N -0.70 0.79 5.36 -57.93 -0.31 0.48 16 9 C 0.15 -0.23 4.22 -67.11 -0.28 -0.52 16 10 H 0.13 0.05 7.46 -51.93 -0.39 -0.33 16 11 C -0.17 0.38 7.33 -25.92 -0.19 0.19 16 12 C 0.08 -0.18 1.67 -89.81 -0.15 -0.33 16 13 F -0.18 -0.11 16.80 2.25 0.04 -0.07 16 14 C 0.13 -0.26 5.39 -4.04 -0.02 -0.28 16 15 N -0.72 0.15 5.62 -60.34 -0.34 -0.19 16 16 C 0.39 0.45 7.49 -154.86 -1.16 -0.71 16 17 N -0.51 -0.44 9.57 -12.37 -0.12 -0.55 16 18 C 0.15 -0.10 9.84 -17.57 -0.17 -0.27 16 19 C -0.21 0.15 5.36 -104.47 -0.56 -0.41 16 20 C -0.06 0.09 2.82 36.00 0.10 0.19 16 21 O -0.53 -0.08 12.84 -35.23 -0.45 -0.53 16 22 Si 0.68 -1.59 29.91 -169.99 -5.08 -6.67 16 23 C -0.04 -0.01 9.82 -39.26 -0.39 -0.40 16 24 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 25 F -0.13 -0.31 16.65 2.25 0.04 -0.27 16 26 C -0.15 0.56 7.29 -25.91 -0.19 0.37 16 27 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.07 -0.08 8.14 -51.92 -0.42 -0.50 16 33 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.41 -1.42 8.84 -40.82 -0.36 -1.78 16 37 H 0.11 -0.35 7.96 -51.93 -0.41 -0.76 16 38 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.09 -0.25 7.94 -51.93 -0.41 -0.66 16 41 H 0.42 -0.11 7.66 -40.82 -0.31 -0.43 16 42 H 0.16 -0.46 4.84 -52.49 -0.25 -0.71 16 43 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 44 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 45 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 46 H -0.26 0.18 7.01 56.52 0.40 0.58 16 47 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 48 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 49 H 0.11 -0.64 8.08 -51.93 -0.42 -1.06 16 LS Contribution 406.30 15.07 6.12 6.12 Total: 0.00 -7.72 406.30 -9.78 -17.50 By element: Atomic # 1 Polarization: -4.89 SS G_CDS: -7.04 Total: -11.93 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -2.01 Total: 0.10 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.77 Total: -0.27 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -1.07 Total: -4.50 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.35 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.08 Total: -6.67 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -7.72 -9.78 -17.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_16499082_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.627 kcal (2) G-P(sol) polarization free energy of solvation -7.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.346 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.501 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds