Wall clock time and date at job start Thu Mar 4 2021 13:38:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53001 * 109.46880 * 2 1 4 4 C 1.53001 * 109.47251 * 240.00593 * 2 1 3 5 5 O 1.45194 * 109.47109 * 120.00240 * 2 1 3 6 6 C 1.34634 * 117.00020 * 60.00143 * 5 2 1 7 7 O 1.21509 * 120.00063 * 359.97438 * 6 5 2 8 8 N 1.34778 * 120.00069 * 179.97438 * 6 5 2 9 9 C 1.46500 * 120.00321 * 179.97438 * 8 6 5 10 10 H 1.09007 * 112.84541 * 23.80534 * 9 8 6 11 11 C 1.53773 * 113.61715 * 155.00049 * 9 8 6 12 12 C 1.53783 * 87.08292 * 89.20138 * 11 9 8 13 13 H 1.08996 * 113.61645 * 270.80705 * 12 11 9 14 14 C 1.50695 * 113.61409 * 139.98115 * 12 11 9 15 15 N 1.30261 * 126.18062 * 299.97600 * 14 12 11 16 16 N 1.28656 * 109.56778 * 180.02562 * 15 14 12 17 17 C 1.31331 * 109.25652 * 0.02562 * 16 15 14 18 18 C 1.47693 * 126.39749 * 179.97438 * 17 16 15 19 19 C 1.34691 * 122.88906 * 180.02562 * 18 17 16 20 20 S 1.70635 * 110.50434 * 179.73124 * 19 18 17 21 21 C 1.75727 * 91.72374 * 0.26995 * 20 19 18 22 22 C 1.50697 * 125.09557 * 180.02562 * 21 20 19 23 23 O 1.42897 * 109.47451 * 119.97409 * 22 21 20 24 24 Si 1.86304 * 109.46884 * 359.97149 * 22 21 20 25 25 C 1.33093 * 109.81021 * 359.97438 * 21 20 19 26 26 O 1.34568 * 126.18014 * 120.26726 * 14 12 11 27 27 C 1.53780 * 113.69274 * 252.53963 * 9 8 6 28 28 H 1.08996 * 109.47274 * 299.99841 * 1 2 3 29 29 H 1.09003 * 109.47228 * 59.99652 * 1 2 3 30 30 H 1.08999 * 109.47068 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.47182 * 179.97438 * 3 2 1 32 32 H 1.09003 * 109.47474 * 300.00198 * 3 2 1 33 33 H 1.09003 * 109.47001 * 60.00407 * 3 2 1 34 34 H 1.09008 * 109.46968 * 299.99944 * 4 2 1 35 35 H 1.08999 * 109.47377 * 59.99281 * 4 2 1 36 36 H 1.08991 * 109.47008 * 180.02562 * 4 2 1 37 37 H 0.97004 * 120.00096 * 0.02562 * 8 6 5 38 38 H 1.09003 * 113.61705 * 334.65697 * 11 9 8 39 39 H 1.09002 * 113.61858 * 203.75287 * 11 9 8 40 40 H 1.08002 * 124.75182 * 0.02562 * 19 18 17 41 41 H 1.09004 * 109.47030 * 239.97581 * 22 21 20 42 42 H 0.96701 * 114.00113 * 300.00281 * 23 22 21 43 43 H 1.48501 * 109.99951 * 179.97438 * 24 22 21 44 44 H 1.48496 * 110.00106 * 301.32149 * 24 22 21 45 45 H 1.08005 * 123.13005 * 180.02562 * 25 21 20 46 46 H 1.08998 * 113.61438 * 156.32359 * 27 9 8 47 47 H 1.09004 * 113.61623 * 25.42157 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3382 7 8 0.9509 -2.5094 0.5039 8 7 2.0681 -2.6658 2.4165 9 6 1.6740 -4.0669 2.5830 10 1 1.4209 -4.5504 1.6393 11 6 2.6475 -4.8817 3.4508 12 6 1.8063 -4.4478 4.6629 13 1 2.1357 -3.5098 5.1098 14 6 1.6041 -5.5413 5.6799 15 7 1.0259 -6.6895 5.4698 16 7 1.0262 -7.3775 6.5570 17 6 1.6099 -6.6846 7.5078 18 6 1.8147 -7.1145 8.9059 19 6 2.4246 -6.3432 9.8263 20 16 2.4845 -7.1438 11.3320 21 6 1.6675 -8.5539 10.6747 22 6 1.3247 -9.7979 11.4531 23 8 -0.0902 -9.9970 11.4342 24 14 1.9016 -9.6070 13.2143 25 6 1.3958 -8.3581 9.3866 26 8 1.9833 -5.5059 6.9706 27 6 0.6277 -4.2875 3.6882 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4426 0.0005 32 1 1.6766 1.9564 -0.8900 33 1 1.6766 1.9563 0.8900 34 1 1.6767 -1.7489 -1.2494 35 1 1.6766 -0.2073 -2.1393 36 1 3.1299 -0.7215 -1.2490 37 1 2.6277 -2.2369 3.0827 38 1 3.6625 -4.4844 3.4591 39 1 2.6131 -5.9537 3.2567 40 1 2.8164 -5.3544 9.6390 41 1 1.8187 -10.6576 11.0002 42 1 -0.5950 -9.2693 11.8225 43 1 1.5689 -10.8271 13.9928 44 1 3.3668 -9.3677 13.2457 45 1 0.8945 -9.0905 8.7711 46 1 0.0412 -5.1970 3.5590 47 1 0.0121 -3.4104 3.8880 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_271722_14937844_10193906.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:38:33 Heat of formation + Delta-G solvation = -6.116873 kcal Electronic energy + Delta-G solvation = -31288.486666 eV Core-core repulsion = 26761.211369 eV Total energy + Delta-G solvation = -4527.275297 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.128 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -45.14850 -41.90827 -40.54932 -39.73186 -37.87834 -37.68005 -37.15680 -35.32954 -34.27018 -32.70580 -31.20932 -28.34114 -28.29639 -27.85544 -27.11096 -27.04913 -25.61895 -24.31014 -23.21208 -22.92303 -21.16846 -20.98825 -20.48743 -19.35551 -18.98273 -18.34809 -18.31512 -17.77874 -17.57190 -17.16175 -16.99922 -16.65960 -16.38002 -16.32854 -15.52018 -15.40440 -15.37418 -15.17887 -14.61395 -14.44316 -14.37934 -14.19064 -14.04605 -13.89763 -13.78215 -13.45339 -13.40229 -13.16681 -13.06260 -12.91179 -12.87018 -12.84010 -12.70089 -12.50424 -12.31786 -12.27864 -12.12451 -12.03506 -11.85695 -11.78548 -11.31888 -11.05407 -11.00151 -10.67306 -10.29988 -10.06194 -9.41203 -5.26575 -0.68815 0.13588 0.18447 0.53047 1.01009 1.08165 1.09498 1.18662 1.47991 1.80566 1.82106 1.84282 2.67561 3.00206 3.07936 3.20350 3.26335 3.40147 3.49450 3.56475 3.62248 3.76200 3.81936 3.85548 3.95855 4.01268 4.22951 4.26868 4.33275 4.36616 4.44756 4.49078 4.53858 4.55537 4.62198 4.62446 4.68540 4.76349 4.77333 4.82588 4.86000 4.90825 4.92319 4.92610 5.07767 5.07948 5.27976 5.35906 5.44590 5.56747 6.33047 6.40889 7.28025 7.37200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.561 6.561 8 N -0.698 5.698 9 C 0.142 3.858 10 H 0.122 0.878 11 C -0.128 4.128 12 C -0.026 4.026 13 H 0.123 0.877 14 C 0.175 3.825 15 N -0.275 5.275 16 N -0.270 5.270 17 C 0.228 3.772 18 C -0.043 4.043 19 C -0.208 4.208 20 S 0.220 5.780 21 C -0.239 4.239 22 C -0.025 4.025 23 O -0.532 6.532 24 Si 0.654 3.346 25 C -0.064 4.064 26 O -0.221 6.221 27 C -0.133 4.133 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.088 0.912 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.407 0.593 38 H 0.090 0.910 39 H 0.113 0.887 40 H 0.176 0.824 41 H 0.126 0.874 42 H 0.381 0.619 43 H -0.230 1.230 44 H -0.236 1.236 45 H 0.161 0.839 46 H 0.114 0.886 47 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.525 5.155 4.293 7.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.449 6.449 8 N -0.356 5.356 9 C 0.037 3.963 10 H 0.139 0.861 11 C -0.167 4.167 12 C -0.046 4.046 13 H 0.141 0.859 14 C -0.035 4.035 15 N -0.122 5.122 16 N -0.118 5.118 17 C 0.018 3.982 18 C -0.059 4.059 19 C -0.348 4.348 20 S 0.487 5.513 21 C -0.356 4.356 22 C -0.138 4.138 23 O -0.338 6.338 24 Si 0.553 3.447 25 C -0.093 4.093 26 O -0.101 6.101 27 C -0.172 4.172 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.108 0.892 39 H 0.131 0.869 40 H 0.194 0.806 41 H 0.144 0.856 42 H 0.229 0.771 43 H -0.153 1.153 44 H -0.160 1.160 45 H 0.178 0.822 46 H 0.132 0.868 47 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 2.817 3.504 4.982 6.711 hybrid contribution 0.431 0.859 -1.126 1.480 sum 3.248 4.363 3.856 6.668 Atomic orbital electron populations 1.22527 0.93777 1.05109 1.02759 1.22136 0.94485 0.91541 0.81786 1.21884 1.02341 0.92326 1.03369 1.22528 1.01629 1.03479 0.96541 1.86302 1.71477 1.23280 1.46830 1.18043 0.78630 0.80687 0.81913 1.90935 1.40570 1.70336 1.43083 1.44369 1.55599 1.11706 1.23965 1.21694 0.94958 0.79562 1.00052 0.86052 1.23512 0.98865 1.02495 0.91787 1.21430 1.01002 0.93242 0.88916 0.85938 1.27801 0.96480 0.97865 0.81379 1.74304 1.16978 1.02060 1.18811 1.74840 1.17080 1.24771 0.95075 1.24894 0.96696 0.80672 0.95932 1.16180 1.07143 0.96156 0.86456 1.25465 1.04915 1.05515 0.98896 1.83255 1.53695 1.05999 1.08352 1.24942 1.10069 1.01940 0.98612 1.24450 0.86447 0.94549 1.08350 1.86552 1.15142 1.47104 1.84960 0.95131 0.83098 0.89512 0.76997 1.19951 0.99355 0.95644 0.94352 1.84862 1.63594 1.37191 1.24433 1.23629 0.95966 1.04707 0.92918 0.92105 0.90886 0.89370 0.91382 0.89885 0.91395 0.89387 0.90878 0.92089 0.75795 0.89172 0.86876 0.80631 0.85647 0.77084 1.15337 1.15977 0.82198 0.86813 0.89527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.17 8.37 37.16 0.31 0.14 16 2 C 0.14 0.12 1.13 -90.62 -0.10 0.01 16 3 C -0.14 0.16 8.85 37.16 0.33 0.49 16 4 C -0.18 -0.17 8.37 37.16 0.31 0.14 16 5 O -0.36 -0.61 9.94 -40.31 -0.40 -1.01 16 6 C 0.65 1.27 8.06 54.06 0.44 1.70 16 7 O -0.56 -2.48 11.48 -19.28 -0.22 -2.70 16 8 N -0.70 0.85 5.27 -57.93 -0.31 0.54 16 9 C 0.14 -0.22 4.32 -67.12 -0.29 -0.51 16 10 H 0.12 -0.03 7.46 -51.92 -0.39 -0.42 16 11 C -0.13 0.34 7.37 -25.92 -0.19 0.15 16 12 C -0.03 0.05 4.17 -90.96 -0.38 -0.33 16 13 H 0.12 -0.48 8.14 -51.93 -0.42 -0.90 16 14 C 0.17 0.32 7.53 -12.95 -0.10 0.22 16 15 N -0.27 -1.20 11.81 32.59 0.38 -0.81 16 16 N -0.27 -1.42 12.17 32.05 0.39 -1.03 16 17 C 0.23 0.77 8.08 -13.91 -0.11 0.65 16 18 C -0.04 -0.06 5.79 -106.72 -0.62 -0.68 16 19 C -0.21 0.17 10.72 29.48 0.32 0.49 16 20 S 0.22 -0.47 20.31 -107.50 -2.18 -2.66 16 21 C -0.24 0.19 5.71 -36.10 -0.21 -0.01 16 22 C -0.02 0.03 2.96 36.00 0.11 0.14 16 23 O -0.53 0.32 12.86 -35.23 -0.45 -0.13 16 24 Si 0.65 -1.45 30.95 -169.99 -5.26 -6.71 16 25 C -0.06 -0.06 9.86 -40.80 -0.40 -0.46 16 26 O -0.22 -0.55 10.85 3.56 0.04 -0.51 16 27 C -0.13 0.19 7.42 -25.92 -0.19 0.00 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 30 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 34 H 0.09 0.26 5.88 -51.92 -0.31 -0.04 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 36 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.41 -1.41 8.81 -40.82 -0.36 -1.77 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.11 -0.21 8.09 -51.93 -0.42 -0.63 16 40 H 0.18 -0.43 8.06 -52.49 -0.42 -0.85 16 41 H 0.13 -0.14 7.96 -51.93 -0.41 -0.55 16 42 H 0.38 -1.71 8.70 45.56 0.40 -1.32 16 43 H -0.23 -0.15 7.11 56.52 0.40 0.25 16 44 H -0.24 0.10 7.11 56.52 0.40 0.50 16 45 H 0.16 0.25 8.06 -52.48 -0.42 -0.18 16 46 H 0.11 -0.04 7.77 -51.93 -0.40 -0.45 16 47 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 406.66 15.07 6.13 6.13 Total: 0.00 -8.61 406.66 -9.14 -17.75 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -6.47 Total: -10.99 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -0.78 Total: 2.13 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: 0.47 Total: -1.29 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -1.04 Total: -4.36 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.26 Total: -6.71 kcal Atomic # 16 Polarization: -0.47 SS G_CDS: -2.18 Total: -2.66 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -8.61 -9.14 -17.75 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_271722_14937844_10193906.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.633 kcal (2) G-P(sol) polarization free energy of solvation -8.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.135 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds