Wall clock time and date at job start Thu Mar 4 2021 14:06:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86295 * 109.47663 * 2 1 4 4 C 1.50707 * 109.46879 * 239.99798 * 2 1 3 5 5 C 1.38602 * 120.71955 * 119.72725 * 4 2 1 6 6 N 1.32277 * 119.19341 * 179.72262 * 5 4 2 7 7 C 1.32492 * 120.74454 * 0.55922 * 6 5 4 8 8 N 1.38405 * 119.21924 * 179.73175 * 7 6 5 9 9 C 1.47629 * 110.99956 * 29.40264 * 8 7 6 10 10 C 1.53648 * 88.14777 * 222.09575 * 9 8 7 11 11 C 1.46684 * 110.99920 * 293.71771 * 8 7 6 12 12 C 1.53063 * 120.99639 * 12.08911 * 11 8 7 13 13 C 1.53927 * 86.83951 * 209.63821 * 12 11 8 14 14 C 1.53004 * 113.65658 * 139.46660 * 13 12 11 15 15 F 1.39901 * 109.46920 * 202.29069 * 14 13 12 16 16 C 1.53067 * 120.99411 * 264.01830 * 11 8 7 17 17 N 1.32494 * 121.56126 * 359.71309 * 7 6 5 18 18 C 1.32279 * 120.74501 * 359.97438 * 17 7 6 19 19 H 0.96699 * 113.99601 * 59.99608 * 1 2 3 20 20 H 1.09004 * 109.47208 * 120.00735 * 2 1 3 21 21 H 1.48493 * 109.99930 * 298.68215 * 3 2 1 22 22 H 1.48500 * 109.99875 * 59.99918 * 3 2 1 23 23 H 1.07992 * 120.40190 * 359.97438 * 5 4 2 24 24 H 1.08996 * 113.44311 * 336.91845 * 9 8 7 25 25 H 1.09007 * 113.44183 * 107.27348 * 9 8 7 26 26 H 1.09001 * 114.21210 * 271.75793 * 10 9 8 27 27 H 1.09005 * 114.38958 * 138.93998 * 10 9 8 28 28 H 1.08995 * 113.65030 * 324.12328 * 12 11 8 29 29 H 1.08997 * 113.65431 * 95.15728 * 12 11 8 30 30 H 1.08997 * 113.58792 * 270.26449 * 13 12 11 31 31 H 1.08999 * 109.46710 * 322.28806 * 14 13 12 32 32 H 1.08991 * 109.47249 * 82.28944 * 14 13 12 33 33 H 1.09005 * 113.65450 * 264.84453 * 16 11 8 34 34 H 1.08997 * 113.65439 * 35.87613 * 16 11 8 35 35 H 1.07995 * 120.40021 * 179.97438 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7243 -0.0497 -2.1555 6 7 3.1531 -0.7041 -3.2221 7 6 2.8235 -1.9726 -3.4163 8 7 3.2852 -2.6252 -4.5462 9 6 4.5803 -2.0695 -4.9860 10 6 4.0664 -2.1483 -6.4319 11 6 2.6969 -2.0521 -5.7615 12 6 1.9337 -0.7260 -5.7181 13 6 1.1049 -1.2624 -6.8991 14 6 -0.3866 -0.9355 -6.8010 15 9 -1.1148 -1.8417 -7.5793 16 6 1.4588 -2.6777 -6.4085 17 7 2.0627 -2.6313 -2.5544 18 6 1.6058 -2.0374 -1.4644 19 1 -0.3932 0.4418 -0.7650 20 1 1.7923 -0.5140 0.8899 21 1 1.5880 2.4584 -1.2242 22 1 1.5616 2.4678 1.2085 23 1 2.9922 0.9856 -2.0051 24 1 4.7537 -1.0498 -4.6424 25 1 5.4248 -2.7301 -4.7893 26 1 4.2578 -3.1024 -6.9229 27 1 4.3237 -1.2871 -7.0486 28 1 1.3543 -0.5846 -4.8058 29 1 2.5461 0.1395 -5.9711 30 1 1.5276 -1.0203 -7.8742 31 1 -0.7071 -1.0095 -5.7619 32 1 -0.5612 0.0773 -7.1639 33 1 1.6910 -3.3743 -7.2141 34 1 0.7466 -3.0820 -5.6892 35 1 0.9857 -2.5794 -0.7658 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_17321336_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:14 Heat of formation + Delta-G solvation = 61.261861 kcal Electronic energy + Delta-G solvation = -20835.273207 eV Core-core repulsion = 17559.651303 eV Total energy + Delta-G solvation = -3275.621904 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.117 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -48.65769 -43.29427 -41.41629 -38.27926 -37.36711 -34.98115 -33.70963 -30.26404 -29.23437 -27.05044 -26.40292 -25.92404 -24.41655 -23.40749 -21.72560 -19.95706 -19.28799 -18.37896 -18.19805 -17.51130 -17.15794 -16.85939 -16.46638 -16.41978 -16.10088 -16.04509 -15.64347 -14.93034 -14.79589 -14.58758 -14.12838 -13.72513 -13.38905 -13.16287 -12.91054 -12.80311 -12.43989 -12.37517 -12.28989 -12.05701 -11.84001 -11.75879 -11.64641 -11.14787 -10.99495 -10.59791 -10.45209 -9.85634 -4.97005 -0.47600 -0.08771 1.20220 1.54557 1.93270 2.15662 2.37946 2.87551 3.17580 3.19378 3.28830 3.34864 3.41407 3.43903 3.49594 3.55894 3.76359 3.97452 3.98622 4.04205 4.16908 4.24280 4.46525 4.49468 4.52051 4.56597 4.60653 4.66732 4.71022 4.79981 4.87680 4.91728 4.98613 5.10710 5.19011 5.25687 5.62648 6.01646 6.37590 6.91926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.068 4.068 3 Si 0.765 3.235 4 C -0.223 4.223 5 C 0.163 3.837 6 N -0.535 5.535 7 C 0.453 3.547 8 N -0.436 5.436 9 C 0.009 3.991 10 C -0.104 4.104 11 C 0.049 3.951 12 C -0.106 4.106 13 C -0.134 4.134 14 C 0.068 3.932 15 F -0.233 7.233 16 C -0.115 4.115 17 N -0.528 5.528 18 C 0.175 3.825 19 H 0.387 0.613 20 H 0.137 0.863 21 H -0.273 1.273 22 H -0.297 1.297 23 H 0.197 0.803 24 H 0.103 0.897 25 H 0.092 0.908 26 H 0.105 0.895 27 H 0.109 0.891 28 H 0.064 0.936 29 H 0.098 0.902 30 H 0.122 0.878 31 H 0.067 0.933 32 H 0.097 0.903 33 H 0.084 0.916 34 H 0.065 0.935 35 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.784 5.162 0.078 6.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.178 4.178 3 Si 0.668 3.332 4 C -0.227 4.227 5 C -0.004 4.004 6 N -0.252 5.252 7 C 0.098 3.902 8 N -0.158 5.158 9 C -0.118 4.118 10 C -0.142 4.142 11 C -0.040 4.040 12 C -0.145 4.145 13 C -0.153 4.153 14 C 0.014 3.986 15 F -0.214 7.214 16 C -0.154 4.154 17 N -0.243 5.243 18 C 0.008 3.992 19 H 0.236 0.764 20 H 0.154 0.846 21 H -0.199 1.199 22 H -0.225 1.225 23 H 0.213 0.787 24 H 0.121 0.879 25 H 0.111 0.889 26 H 0.123 0.877 27 H 0.128 0.872 28 H 0.082 0.918 29 H 0.116 0.884 30 H 0.140 0.860 31 H 0.086 0.914 32 H 0.115 0.885 33 H 0.103 0.897 34 H 0.084 0.916 35 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 3.904 4.427 -0.017 5.903 hybrid contribution -1.660 0.580 0.547 1.842 sum 2.244 5.008 0.530 5.513 Atomic orbital electron populations 1.86622 1.17992 1.80284 1.50161 1.25100 0.83638 1.11878 0.97147 0.94179 0.90044 0.71431 0.77510 1.22152 1.02571 0.97319 1.00700 1.23457 0.89482 1.00555 0.86917 1.68517 1.24866 1.09021 1.22806 1.21962 0.89799 0.85463 0.92942 1.66415 1.06984 1.44126 0.98294 1.23942 0.91029 1.01678 0.95181 1.22962 0.90454 1.05056 0.95698 1.23688 0.95839 0.95505 0.89010 1.22969 0.97512 0.96942 0.97072 1.23074 0.94512 0.97066 1.00690 1.22092 0.89652 0.92324 0.94568 1.92745 1.79657 1.71071 1.77953 1.22853 0.95976 0.96770 0.99764 1.68193 1.12142 1.39750 1.04253 1.23462 0.92149 0.91740 0.91800 0.76359 0.84586 1.19857 1.22463 0.78718 0.87853 0.88941 0.87677 0.87236 0.91753 0.88358 0.85953 0.91428 0.88458 0.89742 0.91626 0.79864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.13 12.79 -148.98 -1.91 -0.78 16 2 C -0.07 0.37 2.85 71.24 0.20 0.57 16 3 Si 0.76 -5.27 29.87 68.60 2.05 -3.22 16 4 C -0.22 0.59 5.40 -19.69 -0.11 0.48 16 5 C 0.16 -0.45 9.92 84.71 0.84 0.39 16 6 N -0.53 -0.98 6.80 -198.00 -1.35 -2.33 16 7 C 0.45 2.79 5.80 261.49 1.52 4.31 16 8 N -0.44 -2.45 6.53 -702.04 -4.58 -7.03 16 9 C 0.01 0.00 7.57 82.69 0.63 0.63 16 10 C -0.10 0.32 8.21 30.74 0.25 0.57 16 11 C 0.05 0.05 1.14 -0.16 0.00 0.05 16 12 C -0.11 0.12 5.79 30.93 0.18 0.30 16 13 C -0.13 0.20 4.13 -10.17 -0.04 0.15 16 14 C 0.07 -0.01 7.40 71.98 0.53 0.52 16 15 F -0.23 -1.58 17.22 44.97 0.77 -0.81 16 16 C -0.12 -0.30 7.39 30.93 0.23 -0.07 16 17 N -0.53 -4.24 10.47 -197.99 -2.07 -6.32 16 18 C 0.17 0.35 10.92 84.71 0.93 1.27 16 19 H 0.39 -2.86 8.70 -74.06 -0.64 -3.51 16 20 H 0.14 -1.00 7.96 -2.38 -0.02 -1.02 16 21 H -0.27 1.07 7.11 99.48 0.71 1.78 16 22 H -0.30 -0.43 7.11 99.48 0.71 0.28 16 23 H 0.20 -1.75 5.04 -2.91 -0.01 -1.76 16 24 H 0.10 -0.03 6.61 -2.39 -0.02 -0.05 16 25 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 26 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 27 H 0.11 -0.78 8.14 -2.38 -0.02 -0.80 16 28 H 0.06 0.13 6.62 -2.39 -0.02 0.11 16 29 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 30 H 0.12 -0.52 8.14 -2.39 -0.02 -0.54 16 31 H 0.07 -0.01 7.95 -2.39 -0.02 -0.03 16 32 H 0.10 -0.43 8.14 -2.39 -0.02 -0.45 16 33 H 0.08 0.16 8.14 -2.38 -0.02 0.14 16 34 H 0.07 0.47 8.10 -2.39 -0.02 0.45 16 35 H 0.18 -0.22 8.06 -2.91 -0.02 -0.24 16 Total: 0.00 -16.33 290.43 -1.42 -17.75 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: 0.51 Total: -6.44 kcal Atomic # 6 Polarization: 4.02 SS G_CDS: 5.16 Total: 9.17 kcal Atomic # 7 Polarization: -7.67 SS G_CDS: -8.00 Total: -15.67 kcal Atomic # 8 Polarization: 1.13 SS G_CDS: -1.91 Total: -0.78 kcal Atomic # 9 Polarization: -1.58 SS G_CDS: 0.77 Total: -0.81 kcal Atomic # 14 Polarization: -5.27 SS G_CDS: 2.05 Total: -3.22 kcal Total: -16.33 -1.42 -17.75 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.009 kcal (2) G-P(sol) polarization free energy of solvation -16.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.682 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.747 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds