Wall clock time and date at job start Thu Mar 4 2021 14:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86305 * 109.46971 * 2 1 4 4 C 1.50695 * 109.47294 * 120.00019 * 2 1 3 5 5 C 1.38839 * 120.33686 * 64.72542 * 4 2 1 6 6 C 1.38340 * 118.50688 * 179.73460 * 5 4 2 7 7 C 1.39096 * 119.09632 * 0.55896 * 6 5 4 8 8 N 1.39015 * 119.70504 * 179.68287 * 7 6 5 9 9 C 1.47633 * 110.99805 * 207.25749 * 8 7 6 10 10 C 1.53653 * 88.14380 * 222.09688 * 9 8 7 11 11 C 1.46693 * 110.99906 * 111.57044 * 8 7 6 12 12 C 1.53062 * 120.99292 * 12.09183 * 11 8 7 13 13 C 1.53926 * 86.83850 * 259.63827 * 12 11 8 14 14 C 1.52996 * 113.65981 * 220.53310 * 13 12 11 15 15 F 1.39900 * 109.47251 * 162.70832 * 14 13 12 16 16 C 1.53062 * 120.99156 * 264.02543 * 11 8 7 17 17 N 1.32421 * 120.59188 * 359.69947 * 7 6 5 18 18 C 1.31937 * 121.62268 * 0.02562 * 17 7 6 19 19 H 0.96705 * 114.00176 * 299.99486 * 1 2 3 20 20 H 1.08993 * 109.46845 * 240.00354 * 2 1 3 21 21 H 1.48497 * 110.00101 * 178.68149 * 3 2 1 22 22 H 1.48501 * 109.99911 * 300.00285 * 3 2 1 23 23 H 1.08003 * 120.74434 * 359.97438 * 5 4 2 24 24 H 1.08004 * 120.45464 * 180.25823 * 6 5 4 25 25 H 1.09000 * 113.44021 * 336.91317 * 9 8 7 26 26 H 1.08998 * 113.44001 * 107.27192 * 9 8 7 27 27 H 1.09007 * 114.20594 * 271.76137 * 10 9 8 28 28 H 1.08997 * 114.38717 * 138.94441 * 10 9 8 29 29 H 1.08997 * 113.65725 * 14.12374 * 12 11 8 30 30 H 1.08992 * 113.65497 * 145.15495 * 12 11 8 31 31 H 1.09002 * 113.58393 * 89.73309 * 13 12 11 32 32 H 1.09001 * 109.47204 * 282.71025 * 14 13 12 33 33 H 1.09002 * 109.47273 * 42.71218 * 14 13 12 34 34 H 1.09003 * 113.65284 * 214.84637 * 16 11 8 35 35 H 1.09000 * 113.65347 * 345.87222 * 16 11 8 36 36 H 1.08004 * 119.57716 * 180.02562 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6828 -2.0646 1.4089 6 6 2.1663 -2.6799 2.5497 7 6 2.8710 -1.9227 3.4797 8 7 3.3568 -2.5267 4.6336 9 6 3.4725 -1.5491 5.7339 10 6 4.8241 -2.1865 6.0913 11 6 4.8223 -2.5888 4.6174 12 6 5.6332 -1.8005 3.5859 13 6 5.7621 -3.1205 2.8046 14 6 7.1491 -3.3419 2.1980 15 9 7.3009 -4.6913 1.8615 16 6 5.5527 -3.8481 4.1447 17 7 3.0829 -0.6316 3.2758 18 6 2.6383 -0.0198 2.1946 19 1 -0.3934 0.4416 0.7651 20 1 1.7923 -0.5138 -0.8900 21 1 3.5346 1.7704 0.0321 22 1 1.5614 2.4679 -1.2085 23 1 1.1278 -2.6259 0.6717 24 1 1.9948 -3.7328 2.7183 25 1 3.5567 -0.5180 5.3907 26 1 2.7153 -1.6755 6.5076 27 1 4.7535 -3.0255 6.7838 28 1 5.6022 -1.4716 6.3587 29 1 5.0544 -1.0384 3.0643 30 1 6.5818 -1.4251 3.9696 31 1 4.9565 -3.2841 2.0889 32 1 7.2559 -2.7299 1.3024 33 1 7.9123 -3.0604 2.9236 34 1 6.4788 -4.0452 4.6847 35 1 4.9093 -4.7248 4.0704 36 1 2.8305 1.0346 2.0617 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17321336_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:19 Heat of formation + Delta-G solvation = 40.585369 kcal Electronic energy + Delta-G solvation = -20757.419986 eV Core-core repulsion = 17546.327393 eV Total energy + Delta-G solvation = -3211.092593 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.122 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.50057 -43.10200 -40.76181 -38.00850 -37.14989 -33.70080 -33.21119 -29.80714 -29.13089 -26.97257 -26.10638 -24.96863 -24.25240 -22.86542 -21.49711 -19.90688 -18.71554 -18.04728 -17.69919 -17.38771 -16.86098 -16.70108 -16.53986 -16.34455 -16.00364 -15.82665 -15.31787 -14.60045 -14.43996 -14.32687 -14.22245 -13.70036 -13.51729 -13.40920 -12.88280 -12.79503 -12.54126 -12.34678 -12.14225 -12.07305 -11.82119 -11.64554 -10.96741 -10.90718 -10.66776 -10.59510 -10.26561 -9.75444 -5.16736 -0.20177 0.12076 1.13449 1.50199 1.85751 2.42739 2.55706 3.03961 3.26819 3.30226 3.39137 3.43704 3.49840 3.53582 3.73201 3.80225 3.90549 3.98112 4.03045 4.09157 4.20451 4.32809 4.38895 4.41117 4.59026 4.61325 4.63533 4.69679 4.75327 4.82758 4.84347 4.90206 5.00181 5.04411 5.08221 5.16677 5.33026 5.43835 6.13765 6.41707 6.71417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.178 4.178 5 C -0.041 4.041 6 C -0.142 4.142 7 C 0.272 3.728 8 N -0.410 5.410 9 C 0.006 3.994 10 C -0.131 4.131 11 C 0.049 3.951 12 C -0.135 4.135 13 C -0.147 4.147 14 C 0.073 3.927 15 F -0.216 7.216 16 C -0.110 4.110 17 N -0.499 5.499 18 C 0.115 3.885 19 H 0.380 0.620 20 H 0.116 0.884 21 H -0.254 1.254 22 H -0.250 1.250 23 H 0.141 0.859 24 H 0.143 0.857 25 H 0.101 0.899 26 H 0.088 0.912 27 H 0.097 0.903 28 H 0.084 0.916 29 H 0.092 0.908 30 H 0.097 0.903 31 H 0.094 0.906 32 H 0.072 0.928 33 H 0.077 0.923 34 H 0.096 0.904 35 H 0.080 0.920 36 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.047 2.916 2.143 3.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.173 4.173 3 Si 0.584 3.416 4 C -0.180 4.180 5 C -0.067 4.067 6 C -0.163 4.163 7 C 0.043 3.957 8 N -0.131 5.131 9 C -0.121 4.121 10 C -0.168 4.168 11 C -0.040 4.040 12 C -0.174 4.174 13 C -0.166 4.166 14 C 0.018 3.982 15 F -0.197 7.197 16 C -0.148 4.148 17 N -0.211 5.211 18 C -0.042 4.042 19 H 0.227 0.773 20 H 0.134 0.866 21 H -0.179 1.179 22 H -0.174 1.174 23 H 0.159 0.841 24 H 0.160 0.840 25 H 0.119 0.881 26 H 0.107 0.893 27 H 0.116 0.884 28 H 0.102 0.898 29 H 0.110 0.890 30 H 0.115 0.885 31 H 0.112 0.888 32 H 0.090 0.910 33 H 0.095 0.905 34 H 0.114 0.886 35 H 0.099 0.901 36 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.660 3.026 1.841 3.603 hybrid contribution -0.116 -0.503 -1.072 1.190 sum 0.543 2.523 0.769 2.693 Atomic orbital electron populations 1.86527 1.16829 1.81674 1.49282 1.24948 0.85411 1.10112 0.96840 0.94839 0.81184 0.77689 0.87867 1.21344 1.02051 0.95889 0.98737 1.21470 0.95142 0.93664 0.96469 1.21798 0.98669 1.01877 0.93948 1.20428 0.94104 0.88182 0.92944 1.66981 1.10371 1.33961 1.01819 1.23834 0.98049 0.97001 0.93243 1.23049 0.97641 1.01227 0.94928 1.23148 0.87010 0.98171 0.95665 1.23370 1.01034 0.96565 0.96424 1.23173 0.97697 0.98246 0.97485 1.21938 0.97188 0.78187 1.00865 1.92779 1.96851 1.35908 1.94147 1.22845 1.00510 0.96813 0.94635 1.67639 1.20170 1.11128 1.22146 1.22372 0.93797 0.99243 0.88829 0.77257 0.86623 1.17914 1.17446 0.84069 0.83958 0.88118 0.89342 0.88406 0.89791 0.89005 0.88499 0.88817 0.90958 0.90523 0.88552 0.90137 0.82584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.84 -35.23 -0.45 -0.11 16 2 C -0.06 0.08 2.82 36.00 0.10 0.18 16 3 Si 0.68 -1.34 29.83 -169.99 -5.07 -6.42 16 4 C -0.18 0.11 5.36 -104.46 -0.56 -0.45 16 5 C -0.04 0.00 9.83 -39.32 -0.39 -0.38 16 6 C -0.14 -0.10 9.99 -39.23 -0.39 -0.50 16 7 C 0.27 0.37 4.79 -155.01 -0.74 -0.37 16 8 N -0.41 -0.51 6.43 -171.00 -1.10 -1.61 16 9 C 0.01 0.00 7.58 -8.76 -0.07 -0.07 16 10 C -0.13 0.13 8.21 -26.51 -0.22 -0.09 16 11 C 0.05 0.00 1.20 -137.45 -0.16 -0.16 16 12 C -0.14 0.04 6.72 -26.22 -0.18 -0.13 16 13 C -0.15 -0.02 3.86 -89.67 -0.35 -0.36 16 14 C 0.07 -0.01 7.33 37.16 0.27 0.26 16 15 F -0.22 -0.67 17.30 2.25 0.04 -0.63 16 16 C -0.11 -0.01 7.47 -26.22 -0.20 -0.20 16 17 N -0.50 -0.50 6.08 -12.43 -0.08 -0.58 16 18 C 0.12 -0.05 9.84 -17.57 -0.17 -0.22 16 19 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 20 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 21 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 22 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 23 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 24 H 0.14 0.01 8.06 -52.48 -0.42 -0.41 16 25 H 0.10 0.06 6.61 -51.93 -0.34 -0.29 16 26 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.10 -0.12 8.14 -51.92 -0.42 -0.54 16 28 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 29 H 0.09 0.08 5.31 -51.93 -0.28 -0.19 16 30 H 0.10 -0.15 8.04 -51.93 -0.42 -0.57 16 31 H 0.09 0.13 7.97 -51.93 -0.41 -0.29 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 -0.13 8.06 -51.93 -0.42 -0.55 16 34 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 36 H 0.16 -0.40 4.91 -52.48 -0.26 -0.66 16 LS Contribution 294.18 15.07 4.43 4.43 Total: 0.00 -5.24 294.18 -9.99 -15.24 By element: Atomic # 1 Polarization: -3.10 SS G_CDS: -4.72 Total: -7.82 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -3.05 Total: -2.50 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -1.18 Total: -2.19 kcal Atomic # 8 Polarization: 0.34 SS G_CDS: -0.45 Total: -0.11 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.04 Total: -0.63 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.07 Total: -6.42 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -5.24 -9.99 -15.24 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.821 kcal (2) G-P(sol) polarization free energy of solvation -5.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.235 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds