Wall clock time and date at job start Thu Mar 4 2021 14:06:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86305 * 109.46971 * 2 1 4 4 C 1.50695 * 109.47294 * 120.00019 * 2 1 3 5 5 C 1.38839 * 120.33686 * 64.72542 * 4 2 1 6 6 C 1.38340 * 118.50688 * 179.73460 * 5 4 2 7 7 C 1.39096 * 119.09632 * 0.55896 * 6 5 4 8 8 N 1.39015 * 119.70504 * 179.68287 * 7 6 5 9 9 C 1.47633 * 110.99805 * 207.25749 * 8 7 6 10 10 C 1.53653 * 88.14380 * 222.09688 * 9 8 7 11 11 C 1.46693 * 110.99906 * 111.57044 * 8 7 6 12 12 C 1.53062 * 120.99292 * 12.09183 * 11 8 7 13 13 C 1.53926 * 86.83850 * 259.63827 * 12 11 8 14 14 C 1.52996 * 113.65981 * 220.53310 * 13 12 11 15 15 F 1.39900 * 109.47251 * 162.70832 * 14 13 12 16 16 C 1.53062 * 120.99156 * 264.02543 * 11 8 7 17 17 N 1.32421 * 120.59188 * 359.69947 * 7 6 5 18 18 C 1.31937 * 121.62268 * 0.02562 * 17 7 6 19 19 H 0.96705 * 114.00176 * 299.99486 * 1 2 3 20 20 H 1.08993 * 109.46845 * 240.00354 * 2 1 3 21 21 H 1.48497 * 110.00101 * 178.68149 * 3 2 1 22 22 H 1.48501 * 109.99911 * 300.00285 * 3 2 1 23 23 H 1.08003 * 120.74434 * 359.97438 * 5 4 2 24 24 H 1.08004 * 120.45464 * 180.25823 * 6 5 4 25 25 H 1.09000 * 113.44021 * 336.91317 * 9 8 7 26 26 H 1.08998 * 113.44001 * 107.27192 * 9 8 7 27 27 H 1.09007 * 114.20594 * 271.76137 * 10 9 8 28 28 H 1.08997 * 114.38717 * 138.94441 * 10 9 8 29 29 H 1.08997 * 113.65725 * 14.12374 * 12 11 8 30 30 H 1.08992 * 113.65497 * 145.15495 * 12 11 8 31 31 H 1.09002 * 113.58393 * 89.73309 * 13 12 11 32 32 H 1.09001 * 109.47204 * 282.71025 * 14 13 12 33 33 H 1.09002 * 109.47273 * 42.71218 * 14 13 12 34 34 H 1.09003 * 113.65284 * 214.84637 * 16 11 8 35 35 H 1.09000 * 113.65347 * 345.87222 * 16 11 8 36 36 H 1.08004 * 119.57716 * 180.02562 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6828 -2.0646 1.4089 6 6 2.1663 -2.6799 2.5497 7 6 2.8710 -1.9227 3.4797 8 7 3.3568 -2.5267 4.6336 9 6 3.4725 -1.5491 5.7339 10 6 4.8241 -2.1865 6.0913 11 6 4.8223 -2.5888 4.6174 12 6 5.6332 -1.8005 3.5859 13 6 5.7621 -3.1205 2.8046 14 6 7.1491 -3.3419 2.1980 15 9 7.3009 -4.6913 1.8615 16 6 5.5527 -3.8481 4.1447 17 7 3.0829 -0.6316 3.2758 18 6 2.6383 -0.0198 2.1946 19 1 -0.3934 0.4416 0.7651 20 1 1.7923 -0.5138 -0.8900 21 1 3.5346 1.7704 0.0321 22 1 1.5614 2.4679 -1.2085 23 1 1.1278 -2.6259 0.6717 24 1 1.9948 -3.7328 2.7183 25 1 3.5567 -0.5180 5.3907 26 1 2.7153 -1.6755 6.5076 27 1 4.7535 -3.0255 6.7838 28 1 5.6022 -1.4716 6.3587 29 1 5.0544 -1.0384 3.0643 30 1 6.5818 -1.4251 3.9696 31 1 4.9565 -3.2841 2.0889 32 1 7.2559 -2.7299 1.3024 33 1 7.9123 -3.0604 2.9236 34 1 6.4788 -4.0452 4.6847 35 1 4.9093 -4.7248 4.0704 36 1 2.8305 1.0346 2.0617 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_17321336_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:18 Heat of formation + Delta-G solvation = 44.559989 kcal Electronic energy + Delta-G solvation = -20757.247633 eV Core-core repulsion = 17546.327393 eV Total energy + Delta-G solvation = -3210.920240 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.122 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.62797 -43.08620 -40.73689 -37.95351 -37.13179 -33.68170 -33.19167 -29.77973 -29.11269 -26.94984 -26.06059 -24.94683 -24.23840 -22.84229 -21.48797 -19.87575 -18.67093 -18.03159 -17.67615 -17.40299 -16.90045 -16.68844 -16.55377 -16.35172 -15.95550 -15.79343 -15.34091 -14.62340 -14.42674 -14.32928 -14.22717 -13.67391 -13.50097 -13.38162 -12.85856 -12.74244 -12.48329 -12.33784 -12.18811 -12.04950 -11.83992 -11.64885 -10.96020 -10.88423 -10.66721 -10.52805 -10.25529 -9.74561 -5.04521 -0.19553 0.12735 1.23843 1.59001 1.92978 2.44448 2.57945 3.07850 3.28638 3.40488 3.45437 3.47618 3.52856 3.60079 3.76985 3.84410 3.94587 4.01195 4.06519 4.11781 4.23908 4.38563 4.42362 4.45032 4.61920 4.63258 4.67055 4.72682 4.78370 4.85064 4.89456 4.94913 5.00729 5.06555 5.09809 5.21587 5.35287 5.46011 6.14150 6.68210 6.72351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.065 4.065 3 Si 0.770 3.230 4 C -0.175 4.175 5 C -0.045 4.045 6 C -0.154 4.154 7 C 0.261 3.739 8 N -0.427 5.427 9 C 0.005 3.995 10 C -0.122 4.122 11 C 0.046 3.954 12 C -0.128 4.128 13 C -0.145 4.145 14 C 0.069 3.931 15 F -0.235 7.235 16 C -0.110 4.110 17 N -0.507 5.507 18 C 0.111 3.889 19 H 0.396 0.604 20 H 0.112 0.888 21 H -0.281 1.281 22 H -0.295 1.295 23 H 0.149 0.851 24 H 0.142 0.858 25 H 0.096 0.904 26 H 0.088 0.912 27 H 0.100 0.900 28 H 0.098 0.902 29 H 0.081 0.919 30 H 0.114 0.886 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.097 0.903 34 H 0.108 0.892 35 H 0.065 0.935 36 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.488 3.589 2.637 4.480 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.175 4.175 3 Si 0.675 3.325 4 C -0.177 4.177 5 C -0.071 4.071 6 C -0.175 4.175 7 C 0.033 3.967 8 N -0.148 5.148 9 C -0.123 4.123 10 C -0.159 4.159 11 C -0.043 4.043 12 C -0.167 4.167 13 C -0.164 4.164 14 C 0.014 3.986 15 F -0.217 7.217 16 C -0.148 4.148 17 N -0.219 5.219 18 C -0.046 4.046 19 H 0.246 0.754 20 H 0.129 0.871 21 H -0.208 1.208 22 H -0.223 1.223 23 H 0.166 0.834 24 H 0.160 0.840 25 H 0.115 0.885 26 H 0.106 0.894 27 H 0.119 0.881 28 H 0.116 0.884 29 H 0.099 0.901 30 H 0.132 0.868 31 H 0.094 0.906 32 H 0.099 0.901 33 H 0.115 0.885 34 H 0.126 0.874 35 H 0.084 0.916 36 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 1.085 3.684 2.363 4.509 hybrid contribution -0.288 -0.707 -1.279 1.489 sum 0.796 2.977 1.084 3.267 Atomic orbital electron populations 1.86493 1.16992 1.82132 1.50489 1.25059 0.85386 1.10741 0.96342 0.93824 0.78113 0.75059 0.85492 1.21406 1.01775 0.95679 0.98857 1.21610 0.95070 0.94101 0.96342 1.21882 0.99165 1.02004 0.94416 1.20523 0.94455 0.88492 0.93189 1.66980 1.11186 1.34463 1.02141 1.23837 0.98802 0.96668 0.92978 1.23047 0.97284 1.01388 0.94205 1.23207 0.86500 0.98112 0.96457 1.23341 1.01512 0.95824 0.95977 1.23078 0.97351 0.98756 0.97171 1.22143 0.97511 0.77060 1.01888 1.92737 1.96945 1.37623 1.94375 1.22868 1.00776 0.96328 0.94842 1.67661 1.20509 1.11011 1.22711 1.22716 0.93341 1.00138 0.88431 0.75430 0.87061 1.20769 1.22302 0.83365 0.84049 0.88545 0.89353 0.88131 0.88397 0.90101 0.86822 0.90586 0.90057 0.88462 0.87394 0.91574 0.80636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.86 12.84 -148.98 -1.91 -1.05 16 2 C -0.06 0.17 2.82 71.23 0.20 0.37 16 3 Si 0.77 -3.17 29.83 68.60 2.05 -1.12 16 4 C -0.17 0.20 5.36 -19.76 -0.11 0.09 16 5 C -0.05 -0.02 9.83 22.44 0.22 0.20 16 6 C -0.15 -0.40 9.99 22.50 0.22 -0.17 16 7 C 0.26 0.91 4.79 133.04 0.64 1.55 16 8 N -0.43 -1.34 6.43 -694.92 -4.47 -5.81 16 9 C 0.00 0.00 7.58 82.70 0.63 0.63 16 10 C -0.12 0.30 8.21 30.74 0.25 0.55 16 11 C 0.05 0.01 1.20 -0.15 0.00 0.01 16 12 C -0.13 0.12 6.72 30.93 0.21 0.33 16 13 C -0.14 -0.09 3.86 -10.18 -0.04 -0.13 16 14 C 0.07 -0.03 7.33 71.98 0.53 0.49 16 15 F -0.24 -1.56 17.30 44.97 0.78 -0.78 16 16 C -0.11 -0.05 7.47 30.92 0.23 0.18 16 17 N -0.51 -1.14 6.08 -193.25 -1.18 -2.31 16 18 C 0.11 -0.11 9.84 84.64 0.83 0.72 16 19 H 0.40 -3.66 8.70 -74.05 -0.64 -4.31 16 20 H 0.11 -0.19 7.96 -2.39 -0.02 -0.21 16 21 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 22 H -0.30 -1.06 7.11 99.48 0.71 -0.35 16 23 H 0.15 -0.23 8.06 -2.91 -0.02 -0.26 16 24 H 0.14 0.26 8.06 -2.91 -0.02 0.24 16 25 H 0.10 0.12 6.61 -2.39 -0.02 0.10 16 26 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 27 H 0.10 -0.30 8.14 -2.38 -0.02 -0.32 16 28 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 29 H 0.08 0.15 5.31 -2.39 -0.01 0.13 16 30 H 0.11 -0.51 8.04 -2.39 -0.02 -0.53 16 31 H 0.08 0.31 7.97 -2.39 -0.02 0.29 16 32 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.10 -0.45 8.06 -2.39 -0.02 -0.47 16 34 H 0.11 -0.23 8.10 -2.39 -0.02 -0.25 16 35 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 36 H 0.18 -1.05 4.91 -2.91 -0.01 -1.06 16 Total: 0.00 -12.78 294.18 -0.43 -13.21 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: 0.49 Total: -6.97 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: 3.82 Total: 4.83 kcal Atomic # 7 Polarization: -2.48 SS G_CDS: -5.64 Total: -8.12 kcal Atomic # 8 Polarization: 0.86 SS G_CDS: -1.91 Total: -1.05 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.78 Total: -0.78 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: 2.05 Total: -1.12 kcal Total: -12.78 -0.43 -13.21 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.769 kcal (2) G-P(sol) polarization free energy of solvation -12.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.209 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds