Wall clock time and date at job start Thu Mar 4 2021 14:06:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.46868 * 2 1 4 4 C 1.50698 * 109.47046 * 239.99907 * 2 1 3 5 5 C 1.33327 * 125.95134 * 119.97400 * 4 2 1 6 6 N 1.32123 * 114.58222 * 180.02562 * 5 4 2 7 7 C 1.29693 * 116.86378 * 359.97438 * 6 5 4 8 8 N 1.38609 * 124.94677 * 179.97438 * 7 6 5 9 9 C 1.47629 * 111.00011 * 337.00527 * 8 7 6 10 10 C 1.53653 * 88.20770 * 137.87229 * 9 8 7 11 11 C 1.46697 * 111.00042 * 72.68913 * 8 7 6 12 12 C 1.53063 * 120.99255 * 95.97785 * 11 8 7 13 13 C 1.53925 * 86.84169 * 259.64093 * 12 11 8 14 14 C 1.53004 * 113.65461 * 220.53775 * 13 12 11 15 15 F 1.39902 * 109.46912 * 162.71436 * 14 13 12 16 16 C 1.53069 * 120.99030 * 347.91468 * 11 8 7 17 17 S 1.70968 * 110.09936 * 0.24886 * 7 6 5 18 18 H 0.96700 * 114.00026 * 299.99803 * 1 2 3 19 19 H 1.08998 * 109.47156 * 119.99838 * 2 1 3 20 20 H 1.48497 * 110.00000 * 299.99788 * 3 2 1 21 21 H 1.48493 * 110.00229 * 61.32270 * 3 2 1 22 22 H 1.08001 * 122.71262 * 0.02562 * 5 4 2 23 23 H 1.09002 * 113.43560 * 252.71732 * 9 8 7 24 24 H 1.08998 * 113.44376 * 23.02553 * 9 8 7 25 25 H 1.09000 * 114.20781 * 88.26838 * 10 9 8 26 26 H 1.08997 * 114.20643 * 221.09866 * 10 9 8 27 27 H 1.08996 * 113.65454 * 14.12895 * 12 11 8 28 28 H 1.09001 * 113.64829 * 145.15268 * 12 11 8 29 29 H 1.08997 * 113.58547 * 89.73671 * 13 12 11 30 30 H 1.09002 * 109.46805 * 282.70991 * 14 13 12 31 31 H 1.08997 * 109.47315 * 42.71266 * 14 13 12 32 32 H 1.08998 * 113.65220 * 214.84473 * 16 11 8 33 33 H 1.08993 * 113.65489 * 345.87688 * 16 11 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7006 -0.1799 -2.1814 6 7 3.0093 -1.0074 -3.1640 7 6 2.5361 -2.2124 -3.0858 8 7 2.7535 -3.2130 -4.0201 9 6 3.1002 -2.6415 -5.3363 10 6 4.1757 -3.7304 -5.4719 11 6 4.1304 -3.7133 -3.9438 12 6 4.4701 -4.9656 -3.1320 13 6 4.9611 -4.0126 -2.0274 14 6 6.2477 -4.4780 -1.3423 15 9 6.8265 -3.4037 -0.6581 16 6 5.1956 -2.9694 -3.1345 17 16 1.5989 -2.3846 -1.6662 18 1 -0.3933 0.4417 0.7651 19 1 1.7924 -0.5138 0.8900 20 1 1.5615 2.4679 -1.2085 21 1 1.5879 2.4586 1.2242 22 1 3.0438 0.8437 -2.1510 23 1 2.2999 -2.7286 -6.0712 24 1 3.5095 -1.6330 -5.2770 25 1 3.8187 -4.6580 -5.9194 26 1 5.1165 -3.3792 -5.8957 27 1 3.5968 -5.5523 -2.8470 28 1 5.2630 -5.5703 -3.5722 29 1 4.1832 -3.7291 -1.3185 30 1 6.0154 -5.2755 -0.6365 31 1 6.9454 -4.8490 -2.0931 32 1 6.1914 -3.0159 -3.5754 33 1 4.9030 -1.9583 -2.8516 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17321336_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:22 Heat of formation + Delta-G solvation = 46.947106 kcal Electronic energy + Delta-G solvation = -19329.434243 eV Core-core repulsion = 16207.769762 eV Total energy + Delta-G solvation = -3121.664481 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.078 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -48.47934 -42.91991 -40.26352 -38.06258 -37.22828 -32.84635 -30.35207 -29.15930 -27.03749 -26.22909 -24.74136 -24.31657 -21.82126 -21.19459 -19.48601 -19.10606 -18.61816 -17.60348 -17.34327 -16.83986 -16.64923 -16.47717 -16.12573 -15.80395 -15.51555 -15.02907 -14.71945 -14.23625 -14.06146 -13.58998 -13.53967 -13.20555 -12.95709 -12.73699 -12.47031 -12.37340 -12.09408 -12.07970 -11.82823 -11.70114 -10.94182 -10.92218 -10.73778 -10.31664 -10.14135 -9.65283 -5.07279 -0.45165 0.09340 0.69606 1.29650 1.49407 1.63833 1.87158 2.61771 3.02288 3.12590 3.26917 3.36056 3.41891 3.55048 3.74381 3.78428 3.98059 4.05187 4.07197 4.13684 4.24065 4.36106 4.50696 4.58355 4.63052 4.65141 4.70382 4.80236 4.82719 4.87450 4.97204 5.09343 5.13407 5.29733 5.90021 6.26208 6.58040 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.040 4.040 3 Si 0.698 3.302 4 C -0.223 4.223 5 C 0.057 3.943 6 N -0.492 5.492 7 C 0.176 3.824 8 N -0.387 5.387 9 C 0.013 3.987 10 C -0.129 4.129 11 C 0.047 3.953 12 C -0.109 4.109 13 C -0.150 4.150 14 C 0.073 3.927 15 F -0.216 7.216 16 C -0.133 4.133 17 S 0.209 5.791 18 H 0.385 0.615 19 H 0.082 0.918 20 H -0.249 1.249 21 H -0.254 1.254 22 H 0.179 0.821 23 H 0.092 0.908 24 H 0.100 0.900 25 H 0.100 0.900 26 H 0.088 0.912 27 H 0.082 0.918 28 H 0.101 0.899 29 H 0.096 0.904 30 H 0.076 0.924 31 H 0.077 0.923 32 H 0.098 0.902 33 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.368 -1.500 0.801 2.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.151 4.151 3 Si 0.596 3.404 4 C -0.345 4.345 5 C -0.096 4.096 6 N -0.211 5.211 7 C -0.191 4.191 8 N -0.109 5.109 9 C -0.117 4.117 10 C -0.167 4.167 11 C -0.044 4.044 12 C -0.147 4.147 13 C -0.169 4.169 14 C 0.018 3.982 15 F -0.197 7.197 16 C -0.172 4.172 17 S 0.466 5.534 18 H 0.233 0.767 19 H 0.100 0.900 20 H -0.173 1.173 21 H -0.178 1.178 22 H 0.195 0.805 23 H 0.111 0.889 24 H 0.119 0.881 25 H 0.119 0.881 26 H 0.106 0.894 27 H 0.101 0.899 28 H 0.119 0.881 29 H 0.114 0.886 30 H 0.094 0.906 31 H 0.095 0.905 32 H 0.116 0.884 33 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.381 -2.105 0.355 2.543 hybrid contribution -0.429 1.318 0.593 1.508 sum 0.952 -0.787 0.948 1.557 Atomic orbital electron populations 1.86599 1.17399 1.80351 1.50075 1.24151 0.84685 1.10824 0.95454 0.94864 0.91302 0.73087 0.81154 1.25306 1.08091 0.98012 1.03086 1.21431 0.98807 1.00516 0.88847 1.66973 1.23890 1.02517 1.27681 1.25536 0.99909 0.93310 1.00320 1.66763 1.22989 1.19635 1.01481 1.23858 0.98869 0.99582 0.89398 1.23070 0.99839 0.99945 0.93817 1.23323 0.87372 0.97922 0.95794 1.22847 1.01841 0.95379 0.94676 1.23248 0.98153 0.98610 0.96855 1.21948 0.93686 0.86677 0.95849 1.92779 1.86048 1.58957 1.81924 1.23324 0.98952 0.99751 0.95152 1.84066 1.45037 1.08311 1.16030 0.76656 0.90013 1.17328 1.17796 0.80457 0.88927 0.88140 0.88149 0.89372 0.89916 0.88114 0.88619 0.90583 0.90509 0.88364 0.89126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.53 12.86 -35.23 -0.45 -0.98 16 2 C -0.04 0.01 3.07 36.00 0.11 0.12 16 3 Si 0.70 -0.91 30.49 -169.99 -5.18 -6.09 16 4 C -0.22 -0.39 5.96 -36.02 -0.21 -0.61 16 5 C 0.06 0.11 10.07 -19.14 -0.19 -0.09 16 6 N -0.49 -1.46 7.28 -15.20 -0.11 -1.57 16 7 C 0.18 0.47 5.16 -87.68 -0.45 0.02 16 8 N -0.39 -0.69 6.53 -173.08 -1.13 -1.82 16 9 C 0.01 0.01 7.61 -8.78 -0.07 -0.06 16 10 C -0.13 0.16 8.22 -26.45 -0.22 -0.06 16 11 C 0.05 0.00 1.21 -137.40 -0.17 -0.17 16 12 C -0.11 0.15 7.52 -26.22 -0.20 -0.05 16 13 C -0.15 0.07 3.87 -89.66 -0.35 -0.28 16 14 C 0.07 -0.07 7.33 37.16 0.27 0.20 16 15 F -0.22 -0.53 17.30 2.25 0.04 -0.49 16 16 C -0.13 -0.03 6.73 -26.22 -0.18 -0.20 16 17 S 0.21 0.46 22.92 -107.50 -2.46 -2.00 16 18 H 0.38 -1.25 8.74 45.56 0.40 -0.85 16 19 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 20 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 21 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 22 H 0.18 -0.07 5.85 -52.49 -0.31 -0.38 16 23 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 24 H 0.10 0.15 6.86 -51.93 -0.36 -0.20 16 25 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.31 8.04 -51.93 -0.42 -0.72 16 29 H 0.10 0.06 7.71 -51.93 -0.40 -0.34 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.19 8.06 -51.93 -0.42 -0.61 16 32 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 33 H 0.09 0.19 5.64 -51.93 -0.29 -0.11 16 LS Contribution 285.99 15.07 4.31 4.31 Total: 0.00 -5.98 285.99 -10.58 -16.56 By element: Atomic # 1 Polarization: -2.80 SS G_CDS: -3.94 Total: -6.73 kcal Atomic # 6 Polarization: 0.47 SS G_CDS: -1.65 Total: -1.18 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -1.24 Total: -3.39 kcal Atomic # 8 Polarization: -0.53 SS G_CDS: -0.45 Total: -0.98 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.18 Total: -6.09 kcal Atomic # 16 Polarization: 0.46 SS G_CDS: -2.46 Total: -2.00 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -5.98 -10.58 -16.56 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.508 kcal (2) G-P(sol) polarization free energy of solvation -5.984 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.561 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds