Wall clock time and date at job start Thu Mar 4 2021 14:06:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.46868 * 2 1 4 4 C 1.50698 * 109.47046 * 239.99907 * 2 1 3 5 5 C 1.33327 * 125.95134 * 119.97400 * 4 2 1 6 6 N 1.32123 * 114.58222 * 180.02562 * 5 4 2 7 7 C 1.29693 * 116.86378 * 359.97438 * 6 5 4 8 8 N 1.38609 * 124.94677 * 179.97438 * 7 6 5 9 9 C 1.47629 * 111.00011 * 337.00527 * 8 7 6 10 10 C 1.53653 * 88.20770 * 137.87229 * 9 8 7 11 11 C 1.46697 * 111.00042 * 72.68913 * 8 7 6 12 12 C 1.53063 * 120.99255 * 95.97785 * 11 8 7 13 13 C 1.53925 * 86.84169 * 259.64093 * 12 11 8 14 14 C 1.53004 * 113.65461 * 220.53775 * 13 12 11 15 15 F 1.39902 * 109.46912 * 162.71436 * 14 13 12 16 16 C 1.53069 * 120.99030 * 347.91468 * 11 8 7 17 17 S 1.70968 * 110.09936 * 0.24886 * 7 6 5 18 18 H 0.96700 * 114.00026 * 299.99803 * 1 2 3 19 19 H 1.08998 * 109.47156 * 119.99838 * 2 1 3 20 20 H 1.48497 * 110.00000 * 299.99788 * 3 2 1 21 21 H 1.48493 * 110.00229 * 61.32270 * 3 2 1 22 22 H 1.08001 * 122.71262 * 0.02562 * 5 4 2 23 23 H 1.09002 * 113.43560 * 252.71732 * 9 8 7 24 24 H 1.08998 * 113.44376 * 23.02553 * 9 8 7 25 25 H 1.09000 * 114.20781 * 88.26838 * 10 9 8 26 26 H 1.08997 * 114.20643 * 221.09866 * 10 9 8 27 27 H 1.08996 * 113.65454 * 14.12895 * 12 11 8 28 28 H 1.09001 * 113.64829 * 145.15268 * 12 11 8 29 29 H 1.08997 * 113.58547 * 89.73671 * 13 12 11 30 30 H 1.09002 * 109.46805 * 282.70991 * 14 13 12 31 31 H 1.08997 * 109.47315 * 42.71266 * 14 13 12 32 32 H 1.08998 * 113.65220 * 214.84473 * 16 11 8 33 33 H 1.08993 * 113.65489 * 345.87688 * 16 11 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7006 -0.1799 -2.1814 6 7 3.0093 -1.0074 -3.1640 7 6 2.5361 -2.2124 -3.0858 8 7 2.7535 -3.2130 -4.0201 9 6 3.1002 -2.6415 -5.3363 10 6 4.1757 -3.7304 -5.4719 11 6 4.1304 -3.7133 -3.9438 12 6 4.4701 -4.9656 -3.1320 13 6 4.9611 -4.0126 -2.0274 14 6 6.2477 -4.4780 -1.3423 15 9 6.8265 -3.4037 -0.6581 16 6 5.1956 -2.9694 -3.1345 17 16 1.5989 -2.3846 -1.6662 18 1 -0.3933 0.4417 0.7651 19 1 1.7924 -0.5138 0.8900 20 1 1.5615 2.4679 -1.2085 21 1 1.5879 2.4586 1.2242 22 1 3.0438 0.8437 -2.1510 23 1 2.2999 -2.7286 -6.0712 24 1 3.5095 -1.6330 -5.2770 25 1 3.8187 -4.6580 -5.9194 26 1 5.1165 -3.3792 -5.8957 27 1 3.5968 -5.5523 -2.8470 28 1 5.2630 -5.5703 -3.5722 29 1 4.1832 -3.7291 -1.3185 30 1 6.0154 -5.2755 -0.6365 31 1 6.9454 -4.8490 -2.0931 32 1 6.1914 -3.0159 -3.5754 33 1 4.9030 -1.9583 -2.8516 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_27_17321336_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:21 Heat of formation + Delta-G solvation = 49.136225 kcal Electronic energy + Delta-G solvation = -19329.339315 eV Core-core repulsion = 16207.769762 eV Total energy + Delta-G solvation = -3121.569553 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.078 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.53413 -42.93821 -40.34892 -38.08061 -37.21330 -32.90936 -30.39037 -29.09774 -26.99530 -26.27019 -24.79004 -24.33203 -21.81069 -21.20728 -19.57952 -19.13487 -18.62536 -17.64658 -17.34910 -16.83660 -16.65839 -16.47226 -16.16992 -15.83592 -15.56350 -15.08095 -14.77445 -14.25868 -14.10020 -13.60040 -13.47104 -13.23180 -12.92227 -12.72692 -12.57201 -12.35224 -12.13932 -12.04381 -11.81956 -11.66638 -10.99642 -10.88968 -10.77094 -10.38297 -10.26690 -9.75424 -4.98991 -0.57332 -0.01192 0.58202 1.31409 1.51578 1.54434 1.89900 2.59666 3.03537 3.18231 3.31335 3.40624 3.44698 3.59094 3.73752 3.83755 4.06551 4.08654 4.12219 4.20557 4.28644 4.40267 4.45700 4.61469 4.65821 4.70867 4.79046 4.82607 4.89110 4.92523 5.02611 5.10513 5.18158 5.35084 5.85061 6.43074 6.47646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.052 4.052 3 Si 0.781 3.219 4 C -0.227 4.227 5 C 0.045 3.955 6 N -0.506 5.506 7 C 0.173 3.827 8 N -0.401 5.401 9 C 0.007 3.993 10 C -0.115 4.115 11 C 0.042 3.958 12 C -0.100 4.100 13 C -0.149 4.149 14 C 0.068 3.932 15 F -0.237 7.237 16 C -0.134 4.134 17 S 0.192 5.808 18 H 0.401 0.599 19 H 0.102 0.898 20 H -0.294 1.294 21 H -0.271 1.271 22 H 0.194 0.806 23 H 0.093 0.907 24 H 0.088 0.912 25 H 0.111 0.889 26 H 0.101 0.899 27 H 0.078 0.922 28 H 0.124 0.876 29 H 0.079 0.921 30 H 0.089 0.911 31 H 0.098 0.902 32 H 0.108 0.892 33 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.139 -2.212 0.821 3.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.162 4.162 3 Si 0.682 3.318 4 C -0.349 4.349 5 C -0.108 4.108 6 N -0.224 5.224 7 C -0.194 4.194 8 N -0.123 5.123 9 C -0.123 4.123 10 C -0.152 4.152 11 C -0.049 4.049 12 C -0.137 4.137 13 C -0.167 4.167 14 C 0.014 3.986 15 F -0.218 7.218 16 C -0.173 4.173 17 S 0.448 5.552 18 H 0.253 0.747 19 H 0.119 0.881 20 H -0.222 1.222 21 H -0.196 1.196 22 H 0.211 0.789 23 H 0.111 0.889 24 H 0.106 0.894 25 H 0.129 0.871 26 H 0.119 0.881 27 H 0.097 0.903 28 H 0.142 0.858 29 H 0.098 0.902 30 H 0.108 0.892 31 H 0.116 0.884 32 H 0.127 0.873 33 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 2.157 -2.833 0.396 3.583 hybrid contribution -0.715 1.559 0.573 1.809 sum 1.441 -1.274 0.969 2.154 Atomic orbital electron populations 1.86551 1.18019 1.80964 1.51449 1.24459 0.84407 1.11967 0.95359 0.93888 0.90002 0.70335 0.77554 1.25577 1.07962 0.97630 1.03708 1.21746 0.99088 1.01176 0.88783 1.66994 1.24306 1.02880 1.28254 1.25680 0.99725 0.93469 1.00480 1.66810 1.24254 1.19562 1.01681 1.23879 0.99656 0.99673 0.89076 1.23073 0.99655 0.99546 0.92976 1.23424 0.86303 0.98407 0.96747 1.22870 1.02265 0.94825 0.93774 1.23179 0.98076 0.98794 0.96695 1.22173 0.93700 0.86180 0.96555 1.92735 1.86406 1.60185 1.82495 1.23324 0.99499 0.98774 0.95699 1.84022 1.45418 1.09260 1.16486 0.74732 0.88057 1.22163 1.19633 0.78913 0.88854 0.89386 0.87076 0.88085 0.90327 0.85790 0.90233 0.89241 0.88432 0.87334 0.91222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.31 12.86 -148.98 -1.92 -3.23 16 2 C -0.05 0.00 3.07 71.24 0.22 0.22 16 3 Si 0.78 -1.91 30.49 68.60 2.09 0.18 16 4 C -0.23 -1.02 5.96 24.57 0.15 -0.88 16 5 C 0.04 0.22 10.07 83.54 0.84 1.06 16 6 N -0.51 -3.74 7.28 -202.02 -1.47 -5.21 16 7 C 0.17 1.15 5.16 179.32 0.92 2.07 16 8 N -0.40 -1.73 6.53 -701.50 -4.58 -6.31 16 9 C 0.01 0.01 7.61 82.70 0.63 0.64 16 10 C -0.11 0.36 8.22 30.78 0.25 0.61 16 11 C 0.04 -0.01 1.21 -0.12 0.00 -0.01 16 12 C -0.10 0.36 7.52 30.93 0.23 0.59 16 13 C -0.15 0.13 3.87 -10.17 -0.04 0.09 16 14 C 0.07 -0.17 7.33 71.98 0.53 0.36 16 15 F -0.24 -1.20 17.30 44.97 0.78 -0.42 16 16 C -0.13 -0.08 6.73 30.93 0.21 0.13 16 17 S 0.19 1.11 22.92 -56.49 -1.29 -0.18 16 18 H 0.40 -2.59 8.74 -74.06 -0.65 -3.23 16 19 H 0.10 -0.42 7.96 -2.39 -0.02 -0.43 16 20 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 21 H -0.27 -0.10 7.11 99.48 0.71 0.61 16 22 H 0.19 0.04 5.85 -2.91 -0.02 0.03 16 23 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 24 H 0.09 0.39 6.86 -2.39 -0.02 0.37 16 25 H 0.11 -0.57 8.14 -2.39 -0.02 -0.59 16 26 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 27 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.12 -1.03 8.04 -2.39 -0.02 -1.04 16 29 H 0.08 0.19 7.71 -2.39 -0.02 0.17 16 30 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 31 H 0.10 -0.65 8.06 -2.39 -0.02 -0.67 16 32 H 0.11 -0.20 8.10 -2.39 -0.02 -0.22 16 33 H 0.07 0.37 5.64 -2.39 -0.01 0.36 16 Total: 0.00 -15.01 285.99 -1.93 -16.94 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: 0.53 Total: -6.65 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: 3.94 Total: 4.88 kcal Atomic # 7 Polarization: -5.47 SS G_CDS: -6.05 Total: -11.52 kcal Atomic # 8 Polarization: -1.31 SS G_CDS: -1.92 Total: -3.23 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.78 Total: -0.42 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: 2.09 Total: 0.18 kcal Atomic # 16 Polarization: 1.11 SS G_CDS: -1.29 Total: -0.18 kcal Total: -15.01 -1.93 -16.94 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.075 kcal (2) G-P(sol) polarization free energy of solvation -15.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.062 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.938 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds