Wall clock time and date at job start Thu Mar 4 2021 14:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33329 * 125.95331 * 2 1 4 4 C 1.50704 * 122.70500 * 359.97438 * 3 2 1 5 5 O 1.42902 * 109.47200 * 330.00042 * 4 3 2 6 6 Si 1.86303 * 109.46814 * 210.00314 * 4 3 2 7 7 N 1.32119 * 114.58158 * 179.75267 * 3 2 1 8 8 C 1.29683 * 116.86612 * 0.46634 * 7 3 2 9 9 N 1.38609 * 124.94923 * 179.81554 * 8 7 3 10 10 C 1.48173 * 110.99981 * 23.61031 * 9 8 7 11 11 C 1.54121 * 86.53285 * 223.42157 * 10 9 8 12 12 C 1.47130 * 111.06675 * 284.74355 * 9 8 7 13 13 C 1.52802 * 121.40584 * 262.18212 * 12 9 8 14 14 C 1.53969 * 86.74452 * 101.23357 * 13 12 9 15 15 C 1.52998 * 113.64847 * 139.26873 * 14 13 12 16 16 F 1.39898 * 109.47496 * 202.22162 * 15 14 13 17 17 C 1.52797 * 121.26641 * 11.25034 * 12 9 8 18 18 S 1.70970 * 110.10014 * 359.55360 * 8 7 3 19 19 H 1.09005 * 109.46756 * 179.97438 * 1 2 3 20 20 H 1.08995 * 109.47479 * 299.97532 * 1 2 3 21 21 H 1.08999 * 109.47139 * 59.98108 * 1 2 3 22 22 H 1.08994 * 109.47123 * 90.00171 * 4 3 2 23 23 H 0.96704 * 113.99856 * 299.99838 * 5 4 3 24 24 H 1.48502 * 109.99867 * 180.02562 * 6 4 3 25 25 H 1.48505 * 109.99900 * 301.31632 * 6 4 3 26 26 H 1.09002 * 113.71556 * 108.99219 * 10 9 8 27 27 H 1.09003 * 113.71947 * 337.85548 * 10 9 8 28 28 H 1.09004 * 113.78920 * 137.16199 * 11 10 9 29 29 H 1.08996 * 113.79492 * 268.51527 * 11 10 9 30 30 H 1.09001 * 113.66338 * 215.69544 * 13 12 9 31 31 H 1.08999 * 113.66820 * 346.76656 * 13 12 9 32 32 H 1.08999 * 113.57458 * 270.04209 * 14 13 12 33 33 H 1.08999 * 109.46897 * 322.22423 * 15 14 13 34 34 H 1.08999 * 109.46963 * 82.21996 * 15 14 13 35 35 H 1.09003 * 113.66464 * 13.10949 * 17 12 9 36 36 H 1.08994 * 113.67291 * 144.18293 * 17 12 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4814 2.5019 -0.6747 6 14 2.9325 3.6147 -0.8788 7 7 3.5850 0.8188 0.0052 8 6 3.9315 -0.4309 0.0001 9 7 5.2385 -0.8925 0.0006 10 6 6.1602 0.1232 0.5612 11 6 7.1069 -0.2295 -0.6027 12 6 5.8562 -0.7331 -1.3252 13 6 5.9255 -1.8942 -2.3161 14 6 4.7268 -1.2421 -3.0292 15 6 4.8243 -1.2832 -4.5555 16 9 4.0190 -0.2779 -5.1015 17 6 5.1839 0.0955 -2.4188 18 16 2.5413 -1.4261 0.0001 19 1 -0.3633 -1.0277 -0.0005 20 1 -0.3634 0.5134 0.8901 21 1 -0.3633 0.5141 -0.8898 22 1 1.6088 2.8217 1.0269 23 1 0.5240 2.2118 -1.5962 24 1 2.4035 5.0023 -0.8857 25 1 4.2561 3.5796 -0.2062 26 1 6.5558 -0.1379 1.5427 27 1 5.7709 1.1404 0.5170 28 1 7.5671 0.6391 -1.0738 29 1 7.8247 -1.0141 -0.3634 30 1 6.8370 -1.9055 -2.9137 31 1 5.6965 -2.8628 -1.8719 32 1 3.7605 -1.5832 -2.6579 33 1 5.8593 -1.1241 -4.8579 34 1 4.4861 -2.2550 -4.9151 35 1 4.3629 0.7143 -2.0566 36 1 5.8861 0.6452 -3.0454 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17321336_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:24 Heat of formation + Delta-G solvation = 37.146224 kcal Electronic energy + Delta-G solvation = -21639.000137 eV Core-core repulsion = 18361.373039 eV Total energy + Delta-G solvation = -3277.627098 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.094 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.50135 -42.80999 -40.68490 -37.87732 -37.09546 -33.46405 -31.02422 -29.26183 -28.76802 -27.01565 -25.75103 -24.61516 -24.10167 -21.68840 -20.78224 -19.46252 -18.94469 -18.02983 -17.50280 -17.47574 -16.83290 -16.75876 -16.39918 -16.18214 -15.70475 -15.48477 -14.88294 -14.43796 -14.30562 -14.04052 -13.97746 -13.61326 -13.57577 -13.39830 -13.06027 -12.98506 -12.62658 -12.28857 -12.26460 -12.16750 -11.99294 -11.78428 -11.64618 -11.03538 -10.86849 -10.63169 -10.26089 -10.05650 -9.40781 -4.93302 -0.38715 0.15739 0.70939 1.23129 1.66997 1.80767 2.12701 2.52076 2.92280 3.21625 3.31261 3.35184 3.38472 3.49134 3.74912 3.89908 3.95595 4.00987 4.10349 4.16039 4.24819 4.32078 4.41955 4.55796 4.56604 4.62689 4.66783 4.68434 4.74743 4.77213 4.80728 4.88918 4.95438 5.03915 5.09027 5.17168 5.27673 5.88669 6.35843 6.63507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 C -0.205 4.205 3 C 0.029 3.971 4 C -0.030 4.030 5 O -0.535 6.535 6 Si 0.709 3.291 7 N -0.488 5.488 8 C 0.183 3.817 9 N -0.392 5.392 10 C 0.017 3.983 11 C -0.130 4.130 12 C 0.052 3.948 13 C -0.107 4.107 14 C -0.149 4.149 15 C 0.073 3.927 16 F -0.215 7.215 17 C -0.132 4.132 18 S 0.173 5.827 19 H 0.062 0.938 20 H 0.080 0.920 21 H 0.089 0.911 22 H 0.120 0.880 23 H 0.379 0.621 24 H -0.259 1.259 25 H -0.249 1.249 26 H 0.095 0.905 27 H 0.098 0.902 28 H 0.084 0.916 29 H 0.098 0.902 30 H 0.101 0.899 31 H 0.083 0.917 32 H 0.097 0.903 33 H 0.077 0.923 34 H 0.076 0.924 35 H 0.086 0.914 36 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.562 -2.438 -2.550 3.858 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.326 4.326 3 C -0.103 4.103 4 C -0.144 4.144 5 O -0.340 6.340 6 Si 0.609 3.391 7 N -0.208 5.208 8 C -0.185 4.185 9 N -0.114 5.114 10 C -0.113 4.113 11 C -0.168 4.168 12 C -0.039 4.039 13 C -0.145 4.145 14 C -0.167 4.167 15 C 0.018 3.982 16 F -0.196 7.196 17 C -0.170 4.170 18 S 0.429 5.571 19 H 0.081 0.919 20 H 0.099 0.901 21 H 0.107 0.893 22 H 0.137 0.863 23 H 0.227 0.773 24 H -0.184 1.184 25 H -0.173 1.173 26 H 0.113 0.887 27 H 0.117 0.883 28 H 0.103 0.897 29 H 0.116 0.884 30 H 0.119 0.881 31 H 0.102 0.898 32 H 0.115 0.885 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.105 0.895 36 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 2.037 -2.873 -1.588 3.863 hybrid contribution -0.567 1.100 0.471 1.324 sum 1.470 -1.773 -1.117 2.560 Atomic orbital electron populations 1.20298 0.85954 1.02227 1.04291 1.25708 1.02068 0.94081 1.10763 1.20318 0.87428 0.97560 1.05012 1.24501 0.92442 0.95230 1.02214 1.86530 1.28826 1.89565 1.29042 0.94174 0.77774 0.77099 0.90033 1.66547 1.17500 1.18851 1.17884 1.25174 0.98808 0.90409 1.04099 1.66351 0.95483 1.39120 1.10464 1.24017 0.91580 0.96034 0.99622 1.23208 0.96048 1.01926 0.95668 1.23228 0.94232 0.98034 0.88432 1.22788 0.97990 0.97926 0.95780 1.23266 1.00317 0.98374 0.94777 1.21945 0.94535 0.89584 0.92134 1.92778 1.76101 1.63663 1.87107 1.23236 1.01288 0.96367 0.96149 1.84051 0.96054 1.09473 1.67526 0.91892 0.90101 0.89273 0.86302 0.77315 1.18389 1.17326 0.88657 0.88345 0.89740 0.88350 0.88078 0.89836 0.88494 0.90512 0.90596 0.89516 0.88217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.05 8.91 36.01 0.32 0.37 16 2 C -0.20 -0.19 6.50 -36.02 -0.23 -0.42 16 3 C 0.03 0.05 5.91 -84.18 -0.50 -0.45 16 4 C -0.03 -0.02 2.94 36.01 0.11 0.08 16 5 O -0.54 0.15 10.17 -35.23 -0.36 -0.20 16 6 Si 0.71 0.51 32.09 -169.99 -5.45 -4.94 16 7 N -0.49 -1.15 5.92 -11.36 -0.07 -1.22 16 8 C 0.18 0.35 5.22 -87.68 -0.46 -0.10 16 9 N -0.39 -0.48 6.38 -163.08 -1.04 -1.52 16 10 C 0.02 0.01 7.88 -2.69 -0.02 -0.01 16 11 C -0.13 0.17 8.05 -26.18 -0.21 -0.04 16 12 C 0.05 -0.03 1.35 -131.87 -0.18 -0.21 16 13 C -0.11 0.21 7.53 -26.33 -0.20 0.01 16 14 C -0.15 0.17 3.94 -89.62 -0.35 -0.18 16 15 C 0.07 -0.11 7.40 37.16 0.27 0.16 16 16 F -0.22 -0.35 17.22 2.25 0.04 -0.31 16 17 C -0.13 0.06 6.69 -26.33 -0.18 -0.12 16 18 S 0.17 0.18 22.89 -107.50 -2.46 -2.28 16 19 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 20 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 21 H 0.09 -0.17 6.39 -51.93 -0.33 -0.50 16 22 H 0.12 0.14 7.96 -51.93 -0.41 -0.27 16 23 H 0.38 -1.36 8.13 45.56 0.37 -0.99 16 24 H -0.26 -0.85 7.11 56.52 0.40 -0.44 16 25 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 26 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 27 H 0.10 0.18 6.88 -51.93 -0.36 -0.18 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.10 -0.35 7.97 -51.93 -0.41 -0.77 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.10 -0.02 7.82 -51.93 -0.41 -0.42 16 33 H 0.08 -0.24 7.95 -51.93 -0.41 -0.65 16 34 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.09 0.09 5.81 -51.93 -0.30 -0.21 16 36 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 305.20 15.07 4.60 4.60 Total: 0.00 -4.83 305.20 -11.21 -16.05 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -4.84 Total: -9.25 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -1.62 Total: -0.91 kcal Atomic # 7 Polarization: -1.63 SS G_CDS: -1.11 Total: -2.74 kcal Atomic # 8 Polarization: 0.15 SS G_CDS: -0.36 Total: -0.20 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: 0.51 SS G_CDS: -5.45 Total: -4.94 kcal Atomic # 16 Polarization: 0.18 SS G_CDS: -2.46 Total: -2.28 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -4.83 -11.21 -16.05 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17321336_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.193 kcal (2) G-P(sol) polarization free energy of solvation -4.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.047 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds