Wall clock time and date at job start Thu Mar 4 2021 15:31:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.46827 * 2 1 4 4 C 1.50699 * 109.46853 * 240.00064 * 2 1 3 5 5 C 1.38837 * 120.33715 * 299.99489 * 4 2 1 6 6 C 1.38343 * 118.50255 * 180.02562 * 5 4 2 7 7 C 1.39091 * 119.10294 * 0.02562 * 6 5 4 8 8 N 1.39004 * 119.70856 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99990 * 359.97438 * 8 7 6 10 10 C 1.53002 * 109.47125 * 84.99847 * 9 8 7 11 11 C 1.52997 * 109.47092 * 60.00151 * 10 9 8 12 12 C 1.53006 * 109.47164 * 60.00174 * 11 10 9 13 13 C 1.52999 * 109.46623 * 299.99900 * 12 11 10 14 14 C 1.52997 * 109.47695 * 205.00008 * 9 8 7 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 9 8 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 9 17 17 O 1.42903 * 109.46923 * 179.97438 * 16 15 14 18 18 C 1.52997 * 109.47127 * 59.99836 * 12 11 10 19 19 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 20 20 N 1.32429 * 120.58716 * 0.25036 * 7 6 5 21 21 C 1.31936 * 121.62476 * 359.47854 * 20 7 6 22 22 H 0.96694 * 114.00089 * 60.00065 * 1 2 3 23 23 H 1.08997 * 109.47013 * 119.99722 * 2 1 3 24 24 H 1.48501 * 110.00152 * 60.00047 * 3 2 1 25 25 H 1.48497 * 110.00002 * 181.32080 * 3 2 1 26 26 H 1.07997 * 120.74729 * 0.02562 * 5 4 2 27 27 H 1.07998 * 120.44772 * 180.02562 * 6 5 4 28 28 H 0.96998 * 120.00492 * 179.97438 * 8 7 6 29 29 H 1.09004 * 109.47041 * 325.00130 * 9 8 7 30 30 H 1.09002 * 109.47067 * 300.00298 * 10 9 8 31 31 H 1.09000 * 109.47140 * 300.00226 * 11 10 9 32 32 H 1.09001 * 109.47375 * 180.02562 * 11 10 9 33 33 H 1.08996 * 109.46884 * 180.02562 * 12 11 10 34 34 H 1.09000 * 109.47486 * 299.99829 * 13 12 11 35 35 H 1.09002 * 109.46716 * 179.97438 * 13 12 11 36 36 H 1.09001 * 109.46989 * 59.99548 * 14 9 8 37 37 H 1.08993 * 109.47194 * 299.99651 * 15 14 9 38 38 H 1.09002 * 109.46695 * 179.97438 * 15 14 9 39 39 H 0.96696 * 114.00096 * 179.97438 * 17 16 15 40 40 H 1.09002 * 109.47153 * 180.02562 * 18 12 11 41 41 H 1.09001 * 109.46832 * 60.00321 * 18 12 11 42 42 H 1.08992 * 109.47554 * 180.02562 * 19 16 15 43 43 H 1.09004 * 109.47108 * 300.00289 * 19 16 15 44 44 H 1.07998 * 119.57488 * 180.25318 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6002 -2.0395 -1.4571 6 6 2.0824 -2.6546 -2.5986 7 6 2.8784 -1.9250 -3.4754 8 7 3.3701 -2.5307 -4.6259 9 6 3.0497 -3.9316 -4.9103 10 6 1.6979 -4.0113 -5.6225 11 6 1.7658 -3.2272 -6.9346 12 6 2.8509 -3.8267 -7.8314 13 6 4.2026 -3.7470 -7.1191 14 6 4.1347 -4.5312 -5.8070 15 6 3.8004 -5.9945 -6.1034 16 6 2.4486 -6.0745 -6.8155 17 8 2.1366 -7.4412 -7.0929 18 6 2.5163 -5.2898 -8.1283 19 6 1.3635 -5.4751 -5.9188 20 7 3.1766 -0.6600 -3.2211 21 6 2.7266 -0.0464 -2.1432 22 1 -0.3933 0.4417 -0.7650 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4679 1.2085 25 1 3.5345 1.7704 -0.0322 26 1 0.9803 -2.5810 -0.7580 27 1 1.8440 -3.6873 -2.8062 28 1 3.9253 -2.0258 -5.2405 29 1 3.0013 -4.4903 -3.9755 30 1 0.9249 -3.5842 -4.9836 31 1 2.0042 -2.1848 -6.7230 32 1 0.8027 -3.2835 -7.4418 33 1 2.8996 -3.2678 -8.7659 34 1 4.4410 -2.7047 -6.9075 35 1 4.9756 -4.1745 -7.7578 36 1 5.0977 -4.4744 -5.2996 37 1 3.7524 -6.5527 -5.1686 38 1 4.5733 -6.4213 -6.7427 39 1 1.2909 -7.5678 -7.5443 40 1 3.2896 -5.7170 -8.7669 41 1 1.5533 -5.3464 -8.6358 42 1 0.4004 -5.5326 -6.4258 43 1 1.3154 -6.0335 -4.9838 44 1 2.9871 0.9874 -1.9706 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_27_17849788_13915762.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:31:16 Heat of formation + Delta-G solvation = -46.615634 kcal Electronic energy + Delta-G solvation = -26109.936123 eV Core-core repulsion = 22606.532616 eV Total energy + Delta-G solvation = -3503.403507 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.162 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.91937 -41.21328 -38.28217 -37.59930 -35.99897 -33.90276 -33.65639 -33.05322 -31.97604 -30.43055 -27.14840 -27.10754 -25.76934 -24.72591 -22.92457 -22.78795 -22.56344 -21.88746 -18.97830 -18.65555 -18.45565 -18.02887 -17.26860 -16.49631 -16.18622 -16.06485 -16.01242 -15.81743 -15.63230 -15.38273 -15.15267 -14.80672 -14.50127 -14.36638 -14.26293 -13.96732 -13.68014 -13.65138 -13.47881 -13.36952 -12.99269 -12.66864 -12.34473 -12.24466 -12.07019 -11.98874 -11.93458 -11.49345 -11.39960 -11.25870 -10.77687 -10.65575 -10.51205 -10.37809 -10.35034 -8.67282 -5.02523 0.27197 0.45295 1.32446 1.63985 1.99180 2.04251 2.88219 3.01236 3.27988 3.31766 3.49583 3.60832 3.68046 3.77417 3.80398 3.85062 3.93761 3.96749 4.00772 4.05291 4.09638 4.12061 4.15200 4.24367 4.36658 4.42160 4.47865 4.54759 4.59631 4.67085 4.71912 4.76177 4.84619 4.87433 4.90630 4.91440 4.96877 5.03897 5.05520 5.16853 5.23553 5.28109 5.33592 5.36930 5.54629 6.01586 6.54749 6.60235 6.64600 7.18326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.237 4.237 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.410 3.590 8 N -0.715 5.715 9 C 0.164 3.836 10 C -0.098 4.098 11 C -0.108 4.108 12 C -0.084 4.084 13 C -0.113 4.113 14 C -0.089 4.089 15 C -0.096 4.096 16 C 0.135 3.865 17 O -0.560 6.560 18 C -0.138 4.138 19 C -0.137 4.137 20 N -0.540 5.540 21 C 0.156 3.844 22 H 0.378 0.622 23 H 0.111 0.889 24 H -0.254 1.254 25 H -0.256 1.256 26 H 0.135 0.865 27 H 0.133 0.867 28 H 0.405 0.595 29 H 0.084 0.916 30 H 0.078 0.922 31 H 0.068 0.932 32 H 0.064 0.936 33 H 0.076 0.924 34 H 0.066 0.934 35 H 0.071 0.929 36 H 0.085 0.915 37 H 0.073 0.927 38 H 0.077 0.923 39 H 0.377 0.623 40 H 0.072 0.928 41 H 0.066 0.934 42 H 0.070 0.930 43 H 0.072 0.928 44 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.418 0.050 -3.259 3.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.242 4.242 5 C -0.031 4.031 6 C -0.265 4.265 7 C 0.175 3.825 8 N -0.347 5.347 9 C 0.059 3.941 10 C -0.118 4.118 11 C -0.145 4.145 12 C -0.103 4.103 13 C -0.151 4.151 14 C -0.108 4.108 15 C -0.134 4.134 16 C 0.094 3.906 17 O -0.366 6.366 18 C -0.175 4.175 19 C -0.175 4.175 20 N -0.257 5.257 21 C -0.001 4.001 22 H 0.225 0.775 23 H 0.129 0.871 24 H -0.178 1.178 25 H -0.181 1.181 26 H 0.153 0.847 27 H 0.150 0.850 28 H 0.242 0.758 29 H 0.102 0.898 30 H 0.096 0.904 31 H 0.087 0.913 32 H 0.083 0.917 33 H 0.094 0.906 34 H 0.084 0.916 35 H 0.090 0.910 36 H 0.104 0.896 37 H 0.092 0.908 38 H 0.096 0.904 39 H 0.225 0.775 40 H 0.090 0.910 41 H 0.085 0.915 42 H 0.089 0.911 43 H 0.091 0.909 44 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.224 0.496 -2.599 2.655 hybrid contribution -0.800 -0.777 0.198 1.132 sum -0.575 -0.281 -2.401 2.485 Atomic orbital electron populations 1.86488 1.17379 1.81670 1.49260 1.24775 0.84980 1.09643 0.96983 0.94861 0.81089 0.78188 0.87466 1.20977 1.06096 0.96715 1.00452 1.21178 0.93828 0.93197 0.94876 1.21482 1.05736 1.01706 0.97589 1.18385 0.89057 0.88440 0.86668 1.44625 1.55885 1.11766 1.22395 1.20983 0.94032 0.81009 0.98121 1.21502 0.97387 0.95381 0.97484 1.21524 0.98788 0.99416 0.94812 1.21042 0.94851 0.95607 0.98771 1.21610 0.97424 1.00135 0.95890 1.21291 0.98651 0.94647 0.96177 1.21369 0.95735 0.95123 1.01155 1.21108 0.94632 0.81247 0.93593 1.86558 1.43384 1.25291 1.81346 1.22227 1.02444 0.95496 0.97375 1.22198 0.98879 0.95531 1.00876 1.67143 1.27186 1.09171 1.22185 1.22210 0.91451 0.98487 0.87997 0.77464 0.87122 1.17836 1.18115 0.84737 0.84964 0.75782 0.89797 0.90373 0.91340 0.91699 0.90558 0.91573 0.91017 0.89625 0.90818 0.90412 0.77521 0.90968 0.91549 0.91147 0.90889 0.82930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.15 12.78 -35.23 -0.45 -0.60 16 2 C -0.05 0.00 2.84 36.01 0.10 0.11 16 3 Si 0.68 -0.58 29.82 -169.99 -5.07 -5.65 16 4 C -0.24 -0.15 5.40 -104.46 -0.56 -0.71 16 5 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 6 C -0.24 -0.15 8.83 -39.23 -0.35 -0.50 16 7 C 0.41 0.59 7.63 -155.01 -1.18 -0.59 16 8 N -0.71 0.34 4.40 -53.94 -0.24 0.10 16 9 C 0.16 -0.26 1.74 -67.93 -0.12 -0.38 16 10 C -0.10 0.17 2.80 -90.59 -0.25 -0.09 16 11 C -0.11 0.18 5.04 -26.73 -0.13 0.04 16 12 C -0.08 0.16 3.20 -90.62 -0.29 -0.13 16 13 C -0.11 0.24 5.02 -26.73 -0.13 0.11 16 14 C -0.09 0.17 2.88 -90.62 -0.26 -0.09 16 15 C -0.10 0.09 4.84 -26.73 -0.13 -0.04 16 16 C 0.13 -0.15 1.15 -90.57 -0.10 -0.26 16 17 O -0.56 -0.05 12.98 -35.23 -0.46 -0.50 16 18 C -0.14 0.22 4.82 -26.68 -0.13 0.09 16 19 C -0.14 0.24 4.82 -26.71 -0.13 0.11 16 20 N -0.54 -1.38 10.39 -12.44 -0.13 -1.51 16 21 C 0.16 0.18 9.84 -17.57 -0.17 0.01 16 22 H 0.38 -1.29 8.70 45.56 0.40 -0.89 16 23 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 24 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 25 H -0.26 -0.39 7.11 56.52 0.40 0.02 16 26 H 0.13 -0.03 8.06 -52.49 -0.42 -0.46 16 27 H 0.13 -0.10 6.07 -52.49 -0.32 -0.42 16 28 H 0.40 -0.26 6.99 -40.82 -0.29 -0.54 16 29 H 0.08 -0.11 6.45 -51.93 -0.33 -0.45 16 30 H 0.08 -0.07 7.66 -51.93 -0.40 -0.47 16 31 H 0.07 -0.06 7.60 -51.93 -0.39 -0.45 16 32 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.07 -0.15 6.51 -51.93 -0.34 -0.49 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.38 -1.22 9.05 45.56 0.41 -0.81 16 40 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 42 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.15 -0.12 4.88 -52.49 -0.26 -0.37 16 LS Contribution 326.52 15.07 4.92 4.92 Total: 0.00 -5.73 326.52 -11.43 -17.16 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -5.78 Total: -11.20 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -4.23 Total: -2.70 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.37 Total: -1.41 kcal Atomic # 8 Polarization: -0.20 SS G_CDS: -0.91 Total: -1.11 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.07 Total: -5.65 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -5.73 -11.43 -17.16 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_27_17849788_13915762.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.459 kcal (2) G-P(sol) polarization free energy of solvation -5.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.156 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds