Wall clock time and date at job start Fri Mar 5 2021 08:09:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.39596 * 120.48895 * 82.41394 * 3 2 1 5 5 N 1.31783 * 120.88304 * 180.02562 * 4 3 2 6 6 C 1.31707 * 122.04126 * 359.68131 * 5 4 3 7 7 C 1.39645 * 120.87397 * 0.59112 * 6 5 4 8 8 C 1.47853 * 120.49146 * 179.72360 * 7 6 5 9 9 O 1.21552 * 119.99916 * 179.71682 * 8 7 6 10 10 N 1.34778 * 120.00177 * 359.72247 * 8 7 6 11 11 C 1.46504 * 120.00018 * 179.97438 * 10 8 7 12 12 C 1.52994 * 109.47215 * 274.99675 * 11 10 8 13 13 C 1.53003 * 109.47048 * 154.99468 * 11 10 8 14 14 N 1.46896 * 109.47090 * 305.00147 * 13 11 10 15 15 H 1.00901 * 109.47661 * 54.99808 * 14 13 11 16 16 C 1.46899 * 109.47191 * 294.99613 * 14 13 11 17 17 C 1.46904 * 109.47050 * 174.99685 * 14 13 11 18 18 C 1.50697 * 109.47145 * 184.99660 * 17 14 13 19 19 C 1.37949 * 119.93011 * 90.00248 * 18 17 14 20 20 C 1.39551 * 119.86149 * 180.02562 * 19 18 17 21 21 C 1.43200 * 120.14545 * 179.97438 * 20 19 18 22 22 C 9.01298 * 138.87659 * 203.14796 * 3 1 2 23 23 C 1.39515 * 119.71530 * 359.97438 * 20 19 18 24 24 C 1.37995 * 119.85754 * 0.02562 * 23 20 19 25 25 C 1.50696 * 119.93267 * 179.97438 * 24 23 20 26 26 O 1.42903 * 109.47131 * 119.99513 * 25 24 23 27 27 Si 1.86305 * 109.47185 * 0.02562 * 25 24 23 28 28 H 1.48499 * 109.47126 * 179.97438 * 27 25 24 29 29 H 1.48496 * 109.46885 * 299.99843 * 27 25 24 30 30 H 1.48499 * 109.46850 * 59.99646 * 27 25 24 31 31 C 1.38329 * 120.14125 * 0.26618 * 24 23 20 32 32 C 1.39718 * 120.49158 * 262.43755 * 3 2 1 33 33 H 4.52697 * 13.92965 * 359.97438 * 4 2 1 34 34 H 1.08003 * 119.56142 * 0.02704 * 4 3 2 35 35 H 1.07999 * 119.56596 * 180.30619 * 6 5 4 36 36 H 0.96993 * 120.00030 * 359.97438 * 10 8 7 37 37 H 1.09001 * 109.46992 * 34.99887 * 11 10 8 38 38 H 1.09001 * 109.47058 * 59.99868 * 12 11 10 39 39 H 1.08992 * 109.47553 * 180.02562 * 12 11 10 40 40 H 1.09004 * 109.47122 * 300.00496 * 12 11 10 41 41 H 1.08999 * 109.47213 * 184.99483 * 13 11 10 42 42 H 1.09000 * 109.46757 * 65.00097 * 13 11 10 43 43 H 1.08998 * 109.46977 * 300.00535 * 16 14 13 44 44 H 1.09006 * 109.46951 * 60.00439 * 16 14 13 45 45 H 1.09000 * 109.47173 * 179.97438 * 16 14 13 46 46 H 1.09004 * 109.46570 * 64.99969 * 17 14 13 47 47 H 1.08996 * 109.47192 * 305.00467 * 17 14 13 48 48 H 1.08006 * 120.06815 * 0.02562 * 19 18 17 49 49 H 9.34598 * 135.58492 * 210.92779 * 3 1 2 50 50 H 1.08002 * 120.07210 * 180.02562 * 23 20 19 51 51 H 1.08999 * 109.47358 * 239.99872 * 25 24 23 52 52 H 0.96700 * 114.00311 * 300.00591 * 26 25 24 53 53 H 1.07991 * 119.85722 * 179.72611 * 31 24 23 54 54 H 1.08004 * 120.91349 * 359.97438 * 32 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6059 0.0006 0.0000 4 6 3.3143 -0.1578 -1.1924 5 7 4.6321 -0.1590 -1.2013 6 6 5.3384 -0.0063 -0.1002 7 6 4.7111 0.1527 1.1372 8 6 5.5124 0.3174 2.3689 9 8 4.9571 0.4603 3.4406 10 7 6.8586 0.3092 2.3032 11 6 7.6525 0.4730 3.5235 12 6 7.8227 1.9632 3.8251 13 6 9.0279 -0.1679 3.3270 14 7 8.8613 -1.5696 2.9202 15 1 8.2756 -1.6145 2.0998 16 6 8.2331 -2.3250 4.0122 17 6 10.1758 -2.1506 2.6157 18 6 9.9957 -3.5482 2.0817 19 6 9.8475 -3.7531 0.7255 20 6 9.6803 -5.0479 0.2326 21 6 9.5253 -5.2674 -1.1740 22 6 9.3940 5.4528 2.3302 23 6 9.6647 -6.1275 1.1160 24 6 9.8140 -5.9092 2.4704 25 6 9.7968 -7.0741 3.4262 26 8 11.0366 -7.1270 4.1350 27 14 9.5598 -8.6568 2.4723 28 1 9.5435 -9.8048 3.4141 29 1 8.2718 -8.6022 1.7353 30 1 10.6757 -8.8247 1.5070 31 6 9.9733 -4.6227 2.9532 32 6 3.3148 0.1594 1.1935 33 1 -1.0500 -0.0005 -0.0002 34 1 2.7751 -0.2812 -2.1201 35 1 6.4170 -0.0086 -0.1544 36 1 7.3017 0.1949 1.4480 37 1 7.1422 -0.0104 4.3566 38 1 6.8428 2.4198 3.9651 39 1 8.4137 2.0851 4.7327 40 1 8.3330 2.4466 2.9919 41 1 9.5858 -0.1248 4.2623 42 1 9.5733 0.3726 2.5534 43 1 8.8658 -2.2765 4.8985 44 1 7.2577 -1.8939 4.2381 45 1 8.1091 -3.3650 3.7102 46 1 10.7776 -2.1834 3.5240 47 1 10.6795 -1.5379 1.8681 48 1 9.8608 -2.9131 0.0467 49 1 9.2803 5.6131 3.3617 50 1 9.5361 -7.1321 0.7408 51 1 8.9780 -6.9506 4.1350 52 1 11.8107 -7.2362 3.5659 53 1 10.0853 -4.4568 4.0144 54 1 2.7978 0.2844 2.1335 RHF calculation, no. of doubly occupied orbitals= 72 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275030_14114016_14127244_16591380.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 08:09:44 Heat of formation + Delta-G solvation = 485.905549 kcal Electronic energy + Delta-G solvation = -35572.489935 eV Core-core repulsion = 31074.546428 eV Total energy + Delta-G solvation = -4497.943507 eV No. of doubly occupied orbitals = 72 Molecular weight (most abundant/longest-lived isotopes) = 392.189 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -42.72471 -41.74004 -40.37521 -39.69913 -37.60760 -36.73731 -35.49274 -33.96650 -33.17831 -32.47648 -32.29862 -31.27768 -29.37216 -28.05683 -26.57106 -26.15184 -25.54616 -25.45027 -25.23472 -24.88609 -23.19015 -22.04770 -21.62295 -20.61657 -19.85331 -19.02293 -18.50703 -18.26309 -18.11535 -17.84098 -17.57495 -17.09681 -16.96327 -16.73989 -16.34629 -16.25747 -16.08829 -15.99537 -15.58825 -15.23312 -15.02159 -14.74247 -14.46395 -14.38397 -14.26264 -13.85793 -13.69976 -13.66874 -13.54860 -13.25212 -13.18127 -13.08488 -12.97938 -12.81027 -12.80591 -12.52656 -12.47289 -12.37235 -12.09488 -11.93882 -11.89615 -11.82806 -11.65301 -11.04281 -10.62789 -10.54361 -10.50044 -10.08523 -9.99222 -9.92822 -9.64898 -6.33736 -1.78308 -1.75885 -0.71639 -0.28575 0.31878 0.82541 0.92166 1.07430 1.17214 1.28096 1.32407 1.45189 1.51816 1.73392 1.75768 2.00656 2.63431 2.77597 2.88590 2.96305 2.98511 3.04677 3.11101 3.22068 3.44570 3.46116 3.52673 3.56600 3.60965 3.71303 3.79912 3.89440 3.99420 4.05386 4.10015 4.22883 4.25411 4.35183 4.38178 4.44010 4.46839 4.51182 4.56973 4.61733 4.62348 4.68650 4.76221 4.77730 4.82256 4.87433 4.95708 5.16674 5.25757 5.28043 5.31505 5.59500 5.65445 5.88504 5.95895 6.09075 6.12264 6.38028 6.52396 6.64722 6.66873 6.87853 Molecular weight = 392.19amu Principal moments of inertia in cm(-1) A = 0.006282 B = 0.002343 C = 0.001944 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4456.105819 B =11947.198479 C =14398.146594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.209 4.209 3 C -0.052 4.052 4 C 0.145 3.855 5 N -0.500 5.500 6 C 0.152 3.848 7 C -0.196 4.196 8 C 0.585 3.415 9 O -0.556 6.556 10 N -0.720 5.720 11 C 0.110 3.890 12 C -0.167 4.167 13 C -0.011 4.011 14 N -0.376 5.376 15 H 0.420 0.580 16 C -0.058 4.058 17 C 0.070 3.930 18 C -0.060 4.060 19 C -0.241 4.241 20 C -0.188 4.188 21 C -0.297 4.297 22 C 0.981 3.019 23 C -0.317 4.317 24 C -0.051 4.051 25 C -0.049 4.049 26 O -0.542 6.542 27 Si 0.961 3.039 28 H -0.262 1.262 29 H -0.292 1.292 30 H -0.291 1.291 31 C -0.270 4.270 32 C -0.008 4.008 33 H 0.254 0.746 34 H 0.170 0.830 35 H 0.211 0.789 36 H 0.420 0.580 37 H 0.092 0.908 38 H 0.042 0.958 39 H 0.096 0.904 40 H 0.113 0.887 41 H 0.178 0.822 42 H 0.188 0.812 43 H 0.147 0.853 44 H 0.118 0.882 45 H 0.092 0.908 46 H 0.159 0.841 47 H 0.166 0.834 48 H 0.116 0.884 49 H 0.019 0.981 50 H 0.049 0.951 51 H 0.132 0.868 52 H 0.384 0.616 53 H 0.133 0.867 54 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.135 57.426 13.574 59.873 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.210 4.210 3 C -0.054 4.054 4 C -0.011 4.011 5 N -0.207 5.207 6 C -0.007 4.007 7 C -0.202 4.202 8 C 0.372 3.628 9 O -0.433 6.433 10 N -0.377 5.377 11 C 0.006 3.994 12 C -0.225 4.225 13 C -0.131 4.131 14 N 0.048 4.952 15 H 0.256 0.744 16 C -0.200 4.200 17 C -0.050 4.050 18 C -0.061 4.061 19 C -0.260 4.260 20 C -0.188 4.188 21 C -0.297 4.297 22 C 0.961 3.039 23 C -0.336 4.336 24 C -0.051 4.051 25 C -0.163 4.163 26 O -0.348 6.348 27 Si 0.793 3.207 28 H -0.187 1.187 29 H -0.218 1.218 30 H -0.218 1.218 31 C -0.288 4.288 32 C -0.034 4.034 33 H 0.270 0.730 34 H 0.187 0.813 35 H 0.228 0.772 36 H 0.260 0.740 37 H 0.110 0.890 38 H 0.062 0.938 39 H 0.115 0.885 40 H 0.132 0.868 41 H 0.195 0.805 42 H 0.205 0.795 43 H 0.165 0.835 44 H 0.136 0.864 45 H 0.110 0.890 46 H 0.177 0.823 47 H 0.184 0.816 48 H 0.134 0.866 49 H 0.039 0.961 50 H 0.067 0.933 51 H 0.150 0.850 52 H 0.232 0.768 53 H 0.151 0.849 54 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 9.875 56.756 14.029 59.292 hybrid contribution -1.281 -1.045 1.484 2.222 sum 8.594 55.711 15.512 58.465 Atomic orbital electron populations 1.25890 0.96791 0.96164 0.96045 1.20067 0.92468 1.04041 1.04380 1.16985 0.88310 1.04965 0.95189 1.23381 0.90091 0.90072 0.97574 1.67806 1.07504 1.13352 1.32021 1.23761 1.02163 0.89305 0.85429 1.20931 0.93820 1.09306 0.96100 1.17664 0.83069 0.75415 0.86649 1.90895 1.72209 1.49508 1.30712 1.45949 1.04467 1.74916 1.12409 1.21680 0.89603 1.00386 0.87738 1.22221 1.03310 0.91887 1.05080 1.24674 0.99332 0.77117 1.12014 1.45295 1.16295 1.15663 1.17898 0.74428 1.24189 1.03331 1.00527 0.91969 1.22613 0.82882 0.91329 1.08196 1.19268 1.00401 0.94918 0.91500 1.19884 1.17847 0.92784 0.95516 1.21129 1.01058 0.96872 0.99754 1.82248 1.35020 0.08290 1.04186 1.85622 0.01386 0.03389 1.13530 1.19640 1.24487 0.95116 0.94346 1.19843 0.97052 0.96976 0.91229 1.24457 0.90564 1.02081 0.99151 1.86381 1.15527 1.96153 1.36735 0.85556 0.78802 0.78912 0.77435 1.18651 1.21804 1.21766 1.19970 1.19686 0.90233 0.98914 1.21897 0.93946 0.89916 0.97688 0.72998 0.81319 0.77232 0.73978 0.88976 0.93839 0.88492 0.86826 0.80463 0.79483 0.83491 0.86409 0.88972 0.82280 0.81605 0.86578 0.96103 0.93316 0.84997 0.76754 0.84929 0.84011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 2.18 19.25 74.32 1.43 3.61 16 2 C -0.21 2.95 13.27 30.01 0.40 3.35 16 3 C -0.05 0.90 5.73 -21.35 -0.12 0.78 16 4 C 0.14 -2.64 10.90 85.03 0.93 -1.72 16 5 N -0.50 10.65 10.33 -193.75 -2.00 8.65 16 6 C 0.15 -4.79 10.71 85.05 0.91 -3.88 16 7 C -0.20 5.88 5.88 -20.03 -0.12 5.76 16 8 C 0.59 -21.42 7.75 86.79 0.67 -20.74 16 9 O -0.56 14.92 16.08 -3.88 -0.06 14.86 16 10 N -0.72 37.45 4.27 -445.39 -1.90 35.55 16 11 C 0.11 -6.38 2.30 44.99 0.10 -6.27 16 12 C -0.17 10.59 9.48 71.98 0.68 11.27 16 13 C -0.01 0.75 4.27 86.30 0.37 1.12 16 14 N -0.38 20.57 0.47 -927.04 -0.44 20.13 16 15 H 0.42 -22.37 7.08 -89.69 -0.63 -23.01 16 16 C -0.06 2.73 8.36 127.69 1.07 3.79 16 17 C 0.07 -3.26 4.81 85.56 0.41 -2.84 16 18 C -0.06 1.32 4.72 -19.90 -0.09 1.23 16 19 C -0.24 1.91 9.40 22.52 0.21 2.12 16 20 C -0.19 -1.87 5.72 -21.41 -0.12 -1.99 16 21 C -0.30 -5.06 25.13 69.07 1.74 -3.33 16 22 C 0.98 -99.28 31.14 113.37 3.53 -95.75 16 23 C -0.32 -3.46 8.37 22.52 0.19 -3.27 16 24 C -0.05 0.03 5.38 -19.90 -0.11 -0.08 16 25 C -0.05 0.15 2.82 71.23 0.20 0.35 16 26 O -0.54 2.68 12.77 -148.98 -1.90 0.77 16 27 Si 0.96 3.71 25.07 68.60 1.72 5.43 16 28 H -0.26 -0.78 7.11 99.48 0.71 -0.07 16 29 H -0.29 -2.72 7.11 99.48 0.71 -2.01 16 30 H -0.29 -2.76 7.11 99.48 0.71 -2.05 16 31 C -0.27 3.65 7.39 22.32 0.16 3.82 16 32 C -0.01 0.18 9.44 22.99 0.22 0.39 16 33 H 0.25 -5.88 7.80 -4.42 -0.03 -5.92 16 34 H 0.17 -3.26 8.06 -2.91 -0.02 -3.28 16 35 H 0.21 -9.31 6.41 -2.91 -0.02 -9.32 16 36 H 0.42 -24.60 6.17 -92.71 -0.57 -25.17 16 37 H 0.09 -4.72 6.09 -2.39 -0.01 -4.74 16 38 H 0.04 -2.27 8.14 -2.39 -0.02 -2.29 16 39 H 0.10 -6.34 8.14 -2.39 -0.02 -6.36 16 40 H 0.11 -8.59 8.14 -2.38 -0.02 -8.61 16 41 H 0.18 -12.62 8.09 -2.39 -0.02 -12.64 16 42 H 0.19 -14.30 8.02 -2.39 -0.02 -14.32 16 43 H 0.15 -7.68 8.08 -2.39 -0.02 -7.69 16 44 H 0.12 -5.61 6.39 -2.38 -0.02 -5.63 16 45 H 0.09 -3.30 5.92 -2.39 -0.01 -3.31 16 46 H 0.16 -8.16 8.03 -2.38 -0.02 -8.17 16 47 H 0.17 -8.88 7.96 -2.39 -0.02 -8.90 16 48 H 0.12 -1.67 8.06 -2.91 -0.02 -1.69 16 49 H 0.02 -1.92 7.80 -4.42 -0.03 -1.95 16 50 H 0.05 0.83 4.88 -2.91 -0.01 0.82 16 51 H 0.13 -1.05 7.96 -2.39 -0.02 -1.07 16 52 H 0.38 -3.21 8.70 -74.06 -0.64 -3.86 16 53 H 0.13 -2.73 7.92 -2.91 -0.02 -2.75 16 54 H 0.14 -2.83 7.73 -2.91 -0.02 -2.85 16 Total: 1.00 -191.67 474.12 7.93 -183.74 By element: Atomic # 1 Polarization: -166.71 SS G_CDS: -0.14 Total: -166.86 kcal Atomic # 6 Polarization: -114.94 SS G_CDS: 12.66 Total: -102.28 kcal Atomic # 7 Polarization: 68.67 SS G_CDS: -4.34 Total: 64.33 kcal Atomic # 8 Polarization: 17.60 SS G_CDS: -1.96 Total: 15.63 kcal Atomic # 14 Polarization: 3.71 SS G_CDS: 1.72 Total: 5.43 kcal Total: -191.67 7.93 -183.74 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275030_14114016_14127244_16591380.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 669.646 kcal (2) G-P(sol) polarization free energy of solvation -191.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 477.974 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -183.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 485.906 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds