Wall clock time and date at job start Fri Mar 5 2021 12:26:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17407 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 N 1.46500 * 109.46871 * 198.67480 * 3 2 1 5 5 C 1.34780 * 119.99499 * 83.20731 * 4 3 2 6 6 O 1.21583 * 119.99674 * 184.12968 * 5 4 3 7 7 C 1.47515 * 120.00043 * 4.13397 * 5 4 3 8 8 C 1.36796 * 126.92561 * 173.18712 * 7 5 4 9 9 C 1.41403 * 103.83408 * 179.97438 * 8 7 5 10 10 Cl 1.73601 * 126.72100 * 180.02562 * 9 8 7 11 11 N 1.30229 * 106.55552 * 359.97438 * 9 8 7 12 12 O 1.20885 * 111.95510 * 359.70254 * 11 9 8 13 13 C 1.46496 * 120.00206 * 263.19936 * 4 3 2 14 14 C 1.53112 * 109.52707 * 239.68628 * 13 4 3 15 15 C 1.53037 * 109.28199 * 182.44176 * 14 13 4 16 16 N 1.46851 * 109.52222 * 59.18051 * 15 14 13 17 17 C 1.46896 * 111.00130 * 174.16342 * 16 15 14 18 18 C 1.50703 * 109.46973 * 314.21089 * 17 16 15 19 19 C 1.37945 * 119.93170 * 89.99960 * 18 17 16 20 20 C 1.39555 * 119.85765 * 179.97438 * 19 18 17 21 21 C 1.43202 * 120.13983 * 180.02562 * 20 19 18 22 22 C 9.76896 * 140.33978 * 315.27813 * 3 1 2 23 23 C 1.39513 * 119.71837 * 0.02562 * 20 19 18 24 24 C 1.37999 * 119.85506 * 359.97438 * 23 20 19 25 25 C 1.50702 * 119.92899 * 180.02562 * 24 23 20 26 26 O 1.42904 * 109.46586 * 244.99917 * 25 24 23 27 27 Si 1.86292 * 109.47256 * 4.99993 * 25 24 23 28 28 H 1.48502 * 109.47235 * 180.02562 * 27 25 24 29 29 H 1.48506 * 109.47027 * 299.99996 * 27 25 24 30 30 H 1.48501 * 109.47058 * 59.99861 * 27 25 24 31 31 C 1.38322 * 120.13905 * 359.72866 * 24 23 20 32 32 C 1.46846 * 111.19583 * 298.26086 * 16 15 14 33 33 C 1.53036 * 109.52649 * 61.74204 * 32 16 15 34 34 H 4.40641 * 5.51477 * 179.97438 * 4 1 2 35 35 H 1.09005 * 109.47101 * 78.67470 * 3 2 1 36 36 H 1.08996 * 109.46994 * 318.68182 * 3 2 1 37 37 H 1.08000 * 128.07674 * 0.02562 * 8 7 5 38 38 H 1.09001 * 109.52280 * 359.87984 * 13 4 3 39 39 H 1.08998 * 109.50404 * 302.38690 * 14 13 4 40 40 H 1.09007 * 109.50453 * 62.49992 * 14 13 4 41 41 H 1.08995 * 109.46077 * 299.16689 * 15 14 13 42 42 H 1.08994 * 109.45860 * 179.19168 * 15 14 13 43 43 H 1.09000 * 109.47447 * 74.21031 * 17 16 15 44 44 H 1.09003 * 109.47111 * 194.20990 * 17 16 15 45 45 H 1.08002 * 120.07278 * 0.02562 * 19 18 17 46 46 H 9.78064 * 138.16179 * 68.07068 * 4 1 2 47 47 H 1.07999 * 120.07375 * 179.97438 * 23 20 19 48 48 H 1.08996 * 109.46974 * 125.00189 * 25 24 23 49 49 H 0.96699 * 113.99453 * 179.97438 * 26 25 24 50 50 H 1.08004 * 119.85937 * 180.26984 * 31 24 23 51 51 H 1.08998 * 109.46265 * 301.72577 * 32 16 15 52 52 H 1.08996 * 109.45419 * 181.75316 * 32 16 15 53 53 H 1.08999 * 109.50758 * 180.87947 * 33 32 16 54 54 H 1.08994 * 109.53533 * 60.77744 * 33 32 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.3094 0.4423 5 6 3.2280 1.5837 1.7585 6 8 3.5608 2.6940 2.1257 7 6 2.9275 0.5369 2.7535 8 6 3.0999 0.6169 4.1081 9 6 2.6620 -0.6422 4.5797 10 17 2.6267 -1.1773 6.2308 11 7 2.2894 -1.3214 3.5328 12 8 2.4216 -0.6873 2.5121 13 6 3.5191 2.3198 -0.5460 14 6 4.9895 2.6968 -0.3459 15 6 5.3693 3.7958 -1.3408 16 7 4.5114 4.9685 -1.1277 17 6 4.9380 6.0931 -1.9711 18 6 6.4355 6.2412 -1.8911 19 6 7.2427 5.5659 -2.7829 20 6 8.6293 5.7047 -2.7078 21 6 9.4728 5.0068 -3.6309 22 6 10.1677 -4.4275 4.3873 23 6 9.1901 6.5261 -1.7295 24 6 8.3716 7.1962 -0.8432 25 6 8.9757 8.0844 0.2138 26 8 8.6988 7.5421 1.5066 27 14 10.8191 8.1826 -0.0367 28 1 11.4143 9.0574 1.0053 29 1 11.4057 6.8222 0.0655 30 1 11.1067 8.7461 -1.3802 31 6 6.9978 7.0592 -0.9270 32 6 3.0987 4.6423 -1.3605 33 6 2.6512 3.5684 -0.3663 34 1 -1.0502 -0.0003 -0.0003 35 1 3.0095 -0.2010 -1.0077 36 1 3.0097 -0.7710 0.6785 37 1 3.4806 1.4481 4.6832 38 1 3.3780 1.9196 -1.5501 39 1 5.1369 3.0598 0.6712 40 1 5.6160 1.8208 -0.5147 41 1 5.2347 3.4274 -2.3578 42 1 6.4118 4.0765 -1.1912 43 1 4.6463 5.9036 -3.0041 44 1 4.4629 7.0098 -1.6218 45 1 6.8024 4.9318 -3.5383 46 1 10.7842 3.9198 -5.0638 47 1 10.2625 6.6373 -1.6658 48 1 8.5451 9.0829 0.1388 49 1 9.0590 8.0634 2.2371 50 1 6.3613 7.5892 -0.2339 51 1 2.9748 4.2699 -2.3774 52 1 2.4923 5.5378 -1.2253 53 1 1.6069 3.3153 -0.5495 54 1 2.7613 3.9448 0.6507 RHF calculation, no. of doubly occupied orbitals= 78 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275030_14114070_14122300_16591380.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 12:26:53 Heat of formation + Delta-G solvation = 508.526622 kcal Electronic energy + Delta-G solvation = -40400.028421 eV Core-core repulsion = 35238.239593 eV Total energy + Delta-G solvation = -5161.788829 eV No. of doubly occupied orbitals = 78 Molecular weight (most abundant/longest-lived isotopes) = 441.141 amu Computer time = 2.71 seconds Orbital eigenvalues (eV) -46.50757 -41.79486 -40.34029 -39.13028 -38.35878 -37.70641 -37.30021 -35.04509 -34.98214 -33.58755 -33.13864 -32.47980 -31.96247 -31.29681 -28.29535 -27.41942 -26.43900 -25.47117 -24.94300 -24.79573 -24.08377 -23.68869 -22.03524 -21.08468 -21.00473 -19.86152 -19.33341 -19.29515 -18.88371 -18.49086 -18.44855 -17.87244 -17.75594 -17.02841 -16.67818 -16.63962 -16.39812 -16.30593 -15.91030 -15.84920 -15.41933 -15.17475 -15.13162 -14.99455 -14.94622 -14.67182 -14.43709 -14.37623 -14.10245 -13.96195 -13.71259 -13.68331 -13.33208 -13.25629 -13.05551 -12.76259 -12.68133 -12.50175 -12.31622 -12.21131 -12.17522 -11.87243 -11.80316 -11.75410 -11.58946 -11.43952 -11.36612 -11.19295 -11.12560 -11.02355 -10.74964 -10.28083 -10.12560 -9.91677 -9.44906 -9.12195 -8.03193 -6.18288 -0.61252 -0.05069 -0.04954 0.18796 0.48202 0.79517 0.96651 1.04152 1.09201 1.31930 1.39117 1.43761 1.45885 1.59795 1.84596 1.85861 2.21433 2.84679 2.88507 2.98023 3.27551 3.31038 3.38506 3.42946 3.64567 3.73248 3.73701 3.77492 3.87811 3.95681 4.07317 4.13987 4.21950 4.25326 4.32650 4.39400 4.40780 4.42993 4.44875 4.50523 4.52428 4.62201 4.63426 4.79360 4.84862 4.86756 4.88880 4.95678 5.01810 5.15694 5.19658 5.43753 5.51155 5.79399 5.87151 5.90824 5.96497 6.06903 6.13017 6.24224 6.28920 6.45625 6.62471 6.68346 6.77442 6.85780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.236 4.236 3 C 0.210 3.790 4 N -0.585 5.585 5 C 0.606 3.394 6 O -0.517 6.517 7 C -0.074 4.074 8 C -0.132 4.132 9 C 0.047 3.953 10 Cl 0.044 6.956 11 N -0.342 5.342 12 O 0.148 5.852 13 C 0.160 3.840 14 C -0.125 4.125 15 C 0.075 3.925 16 N -0.548 5.548 17 C 0.107 3.893 18 C -0.020 4.020 19 C -0.270 4.270 20 C -0.162 4.162 21 C -0.195 4.195 22 C 0.000 4.000 23 C -0.308 4.308 24 C -0.024 4.024 25 C -0.106 4.106 26 O -0.566 6.566 27 Si 1.024 2.976 28 H -0.253 1.253 29 H -0.272 1.272 30 H -0.262 1.262 31 C -0.299 4.299 32 C 0.065 3.935 33 C -0.128 4.128 34 H 0.236 0.764 35 H 0.148 0.852 36 H 0.114 0.886 37 H 0.206 0.794 38 H 0.123 0.877 39 H 0.057 0.943 40 H 0.087 0.913 41 H 0.042 0.958 42 H 0.063 0.937 43 H 0.042 0.958 44 H 0.060 0.940 45 H 0.096 0.904 46 H 0.965 0.035 47 H 0.097 0.903 48 H 0.062 0.938 49 H 0.389 0.611 50 H 0.064 0.936 51 H 0.049 0.951 52 H 0.072 0.928 53 H 0.077 0.923 54 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.201 -9.347 -17.540 23.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.237 4.237 3 C 0.089 3.911 4 N -0.315 5.315 5 C 0.391 3.609 6 O -0.392 6.392 7 C -0.140 4.140 8 C -0.155 4.155 9 C -0.135 4.135 10 Cl 0.072 6.928 11 N -0.043 5.043 12 O 0.071 5.929 13 C 0.058 3.942 14 C -0.163 4.163 15 C -0.053 4.053 16 N -0.273 5.273 17 C -0.020 4.020 18 C -0.021 4.021 19 C -0.289 4.289 20 C -0.162 4.162 21 C -0.195 4.195 22 C 0.000 4.000 23 C -0.326 4.326 24 C -0.024 4.024 25 C -0.214 4.214 26 O -0.374 6.374 27 Si 0.846 3.154 28 H -0.177 1.177 29 H -0.197 1.197 30 H -0.186 1.186 31 C -0.318 4.318 32 C -0.063 4.063 33 C -0.167 4.167 34 H 0.253 0.747 35 H 0.165 0.835 36 H 0.131 0.869 37 H 0.223 0.777 38 H 0.141 0.859 39 H 0.075 0.925 40 H 0.105 0.895 41 H 0.060 0.940 42 H 0.081 0.919 43 H 0.060 0.940 44 H 0.078 0.922 45 H 0.114 0.886 46 H 0.965 0.035 47 H 0.114 0.886 48 H 0.080 0.920 49 H 0.238 0.762 50 H 0.082 0.918 51 H 0.067 0.933 52 H 0.090 0.910 53 H 0.096 0.904 54 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 12.464 -10.242 -17.268 23.632 hybrid contribution -1.733 1.968 1.815 3.189 sum 10.731 -8.274 -15.453 20.553 Atomic orbital electron populations 1.25686 0.96907 0.97170 0.99523 1.23647 0.95341 1.02877 1.01879 1.18957 0.83778 0.83380 1.04983 1.48004 1.62913 1.16340 1.04251 1.16682 0.77789 0.84666 0.81754 1.90932 1.47413 1.21222 1.79676 1.24167 1.05179 0.88510 0.96165 1.22997 1.01585 0.98242 0.92687 1.24198 1.05339 0.93113 0.90862 1.98449 1.97018 1.89890 1.07467 1.73823 1.17611 1.19568 0.93273 1.85237 1.59855 1.21268 1.26558 1.21337 0.93808 0.87313 0.91730 1.21942 0.95450 0.98356 1.00568 1.21922 0.97368 0.89212 0.96796 1.61884 1.03111 1.06825 1.55460 1.20902 0.92357 0.94133 0.94630 1.19348 0.93726 0.94639 0.94348 1.19514 0.91809 1.11543 1.06021 1.20348 0.96397 0.99865 0.99564 1.75423 0.38828 1.08157 0.97088 2.00000 0.01603 0.00277 1.98121 1.19553 0.96415 1.11401 1.05271 1.19119 0.94083 0.95443 0.93729 1.25315 1.13961 0.97569 0.84524 1.86535 1.81491 1.54287 1.15099 0.84712 0.71905 0.78929 0.79807 1.17695 1.19697 1.18638 1.19676 0.93810 1.12459 1.05830 1.22011 0.88203 0.98571 0.97545 1.21949 0.99074 0.94670 1.00997 0.74734 0.83462 0.86886 0.77654 0.85888 0.92451 0.89478 0.93959 0.91865 0.93971 0.92155 0.88637 0.03491 0.88558 0.92031 0.76224 0.91772 0.93263 0.90986 0.90430 0.91582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.18 19.25 74.32 1.43 1.25 16 2 C -0.24 -0.33 12.68 31.12 0.39 0.06 16 3 C 0.21 -0.47 5.53 84.57 0.47 0.00 16 4 N -0.58 -1.76 2.41 -811.65 -1.96 -3.72 16 5 C 0.61 5.12 7.00 86.69 0.61 5.73 16 6 O -0.52 -8.10 13.10 -3.98 -0.05 -8.15 16 7 C -0.07 -0.48 6.84 24.38 0.17 -0.32 16 8 C -0.13 -0.78 10.97 22.71 0.25 -0.53 16 9 C 0.05 0.32 7.97 85.71 0.68 1.00 16 10 Cl 0.04 0.21 29.33 -2.72 -0.08 0.13 16 11 N -0.34 -2.75 12.05 -51.03 -0.61 -3.36 16 12 O 0.15 0.83 7.34 65.83 0.48 1.31 16 13 C 0.16 0.57 2.62 45.07 0.12 0.68 16 14 C -0.12 -1.01 5.33 30.64 0.16 -0.85 16 15 C 0.08 0.85 4.57 86.32 0.39 1.25 16 16 N -0.55 -8.09 4.80 -900.95 -4.32 -12.41 16 17 C 0.11 1.81 5.43 85.56 0.46 2.28 16 18 C -0.02 -0.45 4.12 -19.90 -0.08 -0.53 16 19 C -0.27 -4.63 7.48 22.52 0.17 -4.46 16 20 C -0.16 -2.24 5.72 -21.41 -0.12 -2.36 16 21 C -0.19 1.97 22.34 69.07 1.54 3.51 16 22 C 0.00 0.00 36.32 113.37 4.12 4.12 16 23 C -0.31 -6.08 8.37 22.52 0.19 -5.89 16 24 C -0.02 -0.58 5.38 -19.90 -0.11 -0.68 16 25 C -0.11 -1.87 2.79 71.24 0.20 -1.67 16 26 O -0.57 -10.42 12.81 -148.98 -1.91 -12.33 16 27 Si 1.02 10.39 25.13 68.60 1.72 12.11 16 28 H -0.25 -1.74 7.11 99.48 0.71 -1.03 16 29 H -0.27 -3.32 7.04 99.48 0.70 -2.62 16 30 H -0.26 -2.67 7.11 99.48 0.71 -1.97 16 31 C -0.30 -8.21 9.33 22.32 0.21 -8.00 16 32 C 0.06 0.56 5.42 86.33 0.47 1.03 16 33 C -0.13 -1.00 5.34 30.65 0.16 -0.84 16 34 H 0.24 -1.03 7.80 -4.41 -0.03 -1.07 16 35 H 0.15 -1.33 7.78 -2.38 -0.02 -1.35 16 36 H 0.11 -0.33 5.47 -2.39 -0.01 -0.34 16 37 H 0.21 0.62 8.06 -2.91 -0.02 0.60 16 38 H 0.12 -0.31 7.71 -2.39 -0.02 -0.33 16 39 H 0.06 0.94 6.23 -2.39 -0.01 0.92 16 40 H 0.09 0.31 8.14 -2.38 -0.02 0.29 16 41 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 42 H 0.06 1.17 5.64 -2.39 -0.01 1.15 16 43 H 0.04 0.57 8.02 -2.39 -0.02 0.55 16 44 H 0.06 1.13 8.08 -2.39 -0.02 1.11 16 45 H 0.10 1.25 8.06 -2.91 -0.02 1.23 16 46 H 0.97 -106.44 14.98 99.48 1.49 -104.95 16 47 H 0.10 1.51 4.86 -2.91 -0.01 1.49 16 48 H 0.06 0.97 7.96 -2.39 -0.02 0.95 16 49 H 0.39 2.63 8.74 -74.06 -0.65 1.99 16 50 H 0.06 1.98 8.06 -2.91 -0.02 1.96 16 51 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 52 H 0.07 0.67 8.12 -2.39 -0.02 0.65 16 53 H 0.08 0.42 8.14 -2.39 -0.02 0.40 16 54 H 0.07 1.01 5.97 -2.39 -0.01 1.00 16 Total: 0.00 -138.24 493.15 7.74 -130.50 By element: Atomic # 1 Polarization: -101.45 SS G_CDS: 2.59 Total: -98.86 kcal Atomic # 6 Polarization: -17.10 SS G_CDS: 11.88 Total: -5.22 kcal Atomic # 7 Polarization: -12.59 SS G_CDS: -6.90 Total: -19.49 kcal Atomic # 8 Polarization: -17.69 SS G_CDS: -1.48 Total: -19.17 kcal Atomic # 14 Polarization: 10.39 SS G_CDS: 1.72 Total: 12.11 kcal Atomic # 17 Polarization: 0.21 SS G_CDS: -0.08 Total: 0.13 kcal Total: -138.24 7.74 -130.50 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275030_14114070_14122300_16591380.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 639.022 kcal (2) G-P(sol) polarization free energy of solvation -138.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 500.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.743 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -130.495 kcal (6) G-S(sol) free energy of system = (1) + (5) 508.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.71 seconds