Wall clock time and date at job start Sat Mar 6 2021 03:30:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.85274 * 336.20258 * 11 10 8 13 13 C 1.53789 * 113.61044 * 107.50691 * 11 10 8 14 14 C 1.53775 * 87.08254 * 89.11291 * 13 11 10 15 15 H 1.08998 * 113.61981 * 270.87959 * 14 13 11 16 16 C 1.50699 * 113.69047 * 139.99043 * 14 13 11 17 17 C 1.38007 * 119.94312 * 142.46559 * 16 14 13 18 18 C 1.39326 * 119.88066 * 180.02562 * 17 16 14 19 19 C 1.48463 * 120.11574 * 179.97438 * 18 17 16 20 20 N 1.31810 * 126.67466 * 179.71233 * 19 18 17 21 21 N 1.28868 * 107.81797 * 179.83509 * 20 19 18 22 22 N 1.28736 * 109.31989 * 0.43532 * 21 20 19 23 23 N 1.28987 * 108.93999 * 359.72757 * 22 21 20 24 24 C 1.39277 * 119.76865 * 359.97438 * 18 17 16 25 25 C 1.38057 * 119.87819 * 359.97438 * 24 18 17 26 26 C 1.38297 * 120.11703 * 359.72459 * 25 24 18 27 27 C 1.53782 * 113.61408 * 204.99904 * 11 10 8 28 28 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 29 29 C 1.38126 * 119.94094 * 0.02562 * 28 5 4 30 30 C 1.38290 * 120.05768 * 359.97408 * 29 28 5 31 31 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 32 32 H 0.96698 * 114.00095 * 179.97438 * 1 2 3 33 33 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 34 34 H 1.48494 * 110.00156 * 180.02562 * 3 2 1 35 35 H 1.48496 * 109.99869 * 301.32035 * 3 2 1 36 36 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 37 37 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 38 38 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 39 39 H 1.09006 * 113.60927 * 203.66335 * 13 11 10 40 40 H 1.09002 * 113.61266 * 334.56410 * 13 11 10 41 41 H 1.08000 * 120.05718 * 0.02562 * 17 16 14 42 42 H 0.97002 * 125.34482 * 180.16348 * 21 20 19 43 43 H 1.07995 * 120.06185 * 179.97438 * 24 18 17 44 44 H 1.07999 * 119.93646 * 179.97438 * 25 24 18 45 45 H 1.08003 * 119.87922 * 180.27268 * 26 25 24 46 46 H 1.08996 * 113.61608 * 25.43669 * 27 11 10 47 47 H 1.08998 * 113.61607 * 156.34311 * 27 11 10 48 48 H 1.07998 * 120.02743 * 180.02562 * 28 5 4 49 49 H 1.08005 * 119.97091 * 180.02562 * 29 28 5 50 50 H 1.07995 * 119.94278 * 180.27458 * 30 29 28 51 51 H 1.07997 * 119.97398 * 0.02562 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 1 0.1068 -6.1588 2.9829 13 6 -1.4084 -7.3463 1.8901 14 6 -0.7461 -8.6722 1.4798 15 1 -0.5212 -8.7369 0.4152 16 6 -1.4595 -9.8925 2.0023 17 6 -1.5524 -11.0245 1.2185 18 6 -2.2127 -12.1518 1.7026 19 6 -2.3162 -13.3722 0.8636 20 7 -2.9029 -14.5059 1.1920 21 7 -2.7815 -15.3155 0.1968 22 7 -2.1285 -14.7340 -0.7481 23 7 -1.8261 -13.5375 -0.3731 24 6 -2.7753 -12.1298 2.9765 25 6 -2.6757 -10.9924 3.7528 26 6 -2.0138 -9.8784 3.2697 27 6 0.4563 -8.2466 2.3388 28 6 2.3321 -2.7451 -2.4417 29 6 2.8538 -2.0144 -3.4914 30 6 2.9146 -0.6351 -3.4125 31 6 2.4537 0.0160 -2.2834 32 1 -0.3933 -0.8834 -0.0004 33 1 1.7924 -0.5139 0.8899 34 1 3.5349 1.7701 -0.0006 35 1 1.5355 2.4771 -1.1921 36 1 0.7154 -4.4922 -1.2892 37 1 2.3361 -4.6058 -0.5620 38 1 0.8812 -6.7545 0.1657 39 1 -1.9917 -7.4154 2.8083 40 1 -1.9498 -6.8594 1.0790 41 1 -1.1140 -11.0365 0.2315 42 1 -3.1245 -16.2223 0.1660 43 1 -3.2885 -13.0007 3.3564 44 1 -3.1120 -10.9742 4.7406 45 1 -1.9343 -8.9922 3.8820 46 1 1.4202 -8.4865 1.8901 47 1 0.3827 -8.5618 3.3796 48 1 2.2845 -3.8222 -2.5040 49 1 3.2139 -2.5207 -4.3749 50 1 3.3188 -0.0653 -4.2361 51 1 2.5023 1.0932 -2.2241 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17858608.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:30:38 Heat of formation + Delta-G solvation = 108.634437 kcal Electronic energy + Delta-G solvation = -36232.726107 eV Core-core repulsion = 31296.200362 eV Total energy + Delta-G solvation = -4936.525745 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.163 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -45.44052 -41.88920 -41.43995 -40.38623 -39.13021 -38.29901 -37.29210 -35.44120 -34.94747 -34.29681 -32.76902 -32.21014 -31.56760 -31.24232 -29.48561 -26.88860 -26.57046 -26.43892 -25.54917 -25.45198 -23.82730 -23.13682 -22.62489 -22.28200 -21.85043 -20.50022 -19.91694 -19.47912 -18.55732 -18.12895 -18.12323 -17.98219 -17.57917 -17.33743 -16.91306 -16.65394 -16.59987 -16.29996 -15.80858 -15.72375 -15.55985 -15.35329 -15.16395 -15.02770 -14.80376 -14.64292 -14.52787 -14.30339 -14.02503 -13.75621 -13.61799 -13.53032 -13.38169 -13.33822 -12.95914 -12.77615 -12.63362 -12.57878 -12.37995 -12.30009 -12.18917 -12.09533 -12.00753 -11.87326 -11.69597 -11.39080 -11.11235 -10.97310 -10.82589 -10.25097 -10.03672 -9.86201 -9.63798 -9.30740 -4.70521 -0.31875 0.15681 0.19713 0.29412 0.30978 1.25522 1.30700 1.33504 1.38873 1.50888 1.76627 2.06453 2.42422 2.61679 2.64947 2.68872 3.16404 3.28130 3.35820 3.51984 3.57336 3.60354 3.72276 3.73513 3.75258 3.81565 3.87160 3.96192 4.01029 4.06219 4.08371 4.17043 4.19475 4.25400 4.34378 4.39612 4.42815 4.48716 4.54745 4.58298 4.62461 4.68760 4.73227 4.85519 4.87387 4.89484 4.96362 4.97433 5.15839 5.27487 5.31418 5.35429 5.38822 5.41573 5.41830 5.53774 5.58600 5.82258 6.12379 6.27275 6.76455 7.00277 7.14884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.748 3.252 4 C -0.137 4.137 5 C 0.137 3.863 6 O -0.289 6.289 7 C 0.040 3.960 8 C 0.519 3.481 9 O -0.508 6.508 10 N -0.710 5.710 11 C 0.121 3.879 12 H 0.108 0.892 13 C -0.143 4.143 14 C -0.073 4.073 15 H 0.100 0.900 16 C -0.074 4.074 17 C -0.072 4.072 18 C -0.016 4.016 19 C 0.217 3.783 20 N -0.293 5.293 21 N -0.226 5.226 22 N -0.046 5.046 23 N -0.269 5.269 24 C -0.083 4.083 25 C -0.117 4.117 26 C -0.095 4.095 27 C -0.135 4.135 28 C -0.206 4.206 29 C -0.075 4.075 30 C -0.147 4.147 31 C -0.083 4.083 32 H 0.367 0.633 33 H 0.076 0.924 34 H -0.250 1.250 35 H -0.253 1.253 36 H 0.096 0.904 37 H 0.095 0.905 38 H 0.403 0.597 39 H 0.098 0.902 40 H 0.076 0.924 41 H 0.135 0.865 42 H 0.477 0.523 43 H 0.133 0.867 44 H 0.132 0.868 45 H 0.130 0.870 46 H 0.079 0.921 47 H 0.101 0.899 48 H 0.132 0.868 49 H 0.131 0.869 50 H 0.130 0.870 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.678 -4.880 0.262 4.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.647 3.353 4 C -0.138 4.138 5 C 0.092 3.908 6 O -0.201 6.201 7 C -0.039 4.039 8 C 0.304 3.696 9 O -0.381 6.381 10 N -0.364 5.364 11 C 0.015 3.985 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.091 4.091 15 H 0.118 0.882 16 C -0.074 4.074 17 C -0.092 4.092 18 C -0.019 4.019 19 C -0.063 4.063 20 N -0.144 5.144 21 N -0.072 5.072 22 N -0.041 5.041 23 N -0.142 5.142 24 C -0.103 4.103 25 C -0.135 4.135 26 C -0.114 4.114 27 C -0.173 4.173 28 C -0.224 4.224 29 C -0.093 4.093 30 C -0.165 4.165 31 C -0.100 4.100 32 H 0.215 0.785 33 H 0.094 0.906 34 H -0.175 1.175 35 H -0.178 1.178 36 H 0.114 0.886 37 H 0.113 0.887 38 H 0.238 0.762 39 H 0.116 0.884 40 H 0.095 0.905 41 H 0.153 0.847 42 H 0.332 0.668 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.147 0.853 46 H 0.097 0.903 47 H 0.119 0.881 48 H 0.149 0.851 49 H 0.149 0.851 50 H 0.147 0.853 51 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.999 -3.418 0.148 3.564 hybrid contribution -0.162 -2.838 -1.055 3.033 sum 0.836 -6.257 -0.907 6.377 Atomic orbital electron populations 1.86682 1.16879 1.33414 1.97107 1.25208 0.84941 1.13260 0.95069 0.93002 0.78293 0.76664 0.87352 1.19731 1.04920 0.90683 0.98490 1.18782 0.94467 0.90601 0.86946 1.86102 1.77776 1.17311 1.38909 1.22483 1.02774 0.80963 0.97663 1.19982 0.78961 0.82472 0.88182 1.90794 1.47431 1.60964 1.38951 1.45475 1.64393 1.06178 1.20332 1.21883 0.93748 0.94293 0.88531 0.87366 1.23586 0.96601 0.94901 1.03109 1.21611 0.95960 0.91607 0.99969 0.88159 1.19563 0.98936 0.94660 0.94246 1.21053 0.96941 0.91072 1.00105 1.17204 1.02805 0.88923 0.93013 1.23728 0.97236 0.93626 0.91689 1.74926 1.23127 1.01890 1.14481 1.47765 1.35796 1.16382 1.07229 1.78956 1.08165 1.02014 1.14988 1.76091 1.19994 1.07384 1.10721 1.21203 0.97761 0.98916 0.92391 1.21110 0.99497 0.92705 1.00228 1.21221 0.96443 0.98545 0.95173 1.23448 0.98217 0.93984 1.01640 1.21284 1.05991 1.00452 0.94700 1.21027 0.96495 0.93948 0.97839 1.21097 1.02303 0.94719 0.98408 1.20911 0.96917 0.99408 0.92799 0.78495 0.90612 1.17477 1.17793 0.88615 0.88679 0.76215 0.88371 0.90501 0.84726 0.66816 0.84934 0.84994 0.85260 0.90280 0.88060 0.85057 0.85147 0.85252 0.85316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.14 12.65 -35.23 -0.45 -2.58 16 2 C -0.08 -0.23 2.33 36.01 0.08 -0.14 16 3 Si 0.75 0.99 30.40 -169.99 -5.17 -4.17 16 4 C -0.14 -0.44 5.28 -104.47 -0.55 -1.00 16 5 C 0.14 0.30 6.62 -39.21 -0.26 0.04 16 6 O -0.29 -0.60 8.57 -39.32 -0.34 -0.94 16 7 C 0.04 -0.06 5.22 36.01 0.19 0.12 16 8 C 0.52 0.15 7.91 -10.99 -0.09 0.06 16 9 O -0.51 -2.56 16.10 -14.35 -0.23 -2.79 16 10 N -0.71 1.93 5.26 -53.01 -0.28 1.65 16 11 C 0.12 -0.27 4.32 -67.11 -0.29 -0.56 16 12 H 0.11 -0.04 7.46 -51.93 -0.39 -0.43 16 13 C -0.14 0.36 7.25 -25.92 -0.19 0.17 16 14 C -0.07 0.23 3.85 -90.96 -0.35 -0.12 16 15 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 16 C -0.07 0.11 5.29 -104.67 -0.55 -0.45 16 17 C -0.07 0.00 9.36 -39.26 -0.37 -0.36 16 18 C -0.02 -0.02 5.88 -104.89 -0.62 -0.63 16 19 C 0.22 0.50 7.94 -156.30 -1.24 -0.74 16 20 N -0.29 -0.37 12.08 32.17 0.39 0.02 16 21 N -0.23 0.16 7.90 60.35 0.48 0.64 16 22 N -0.05 -0.09 13.47 60.35 0.81 0.72 16 23 N -0.27 -0.87 12.23 32.16 0.39 -0.47 16 24 C -0.08 0.01 9.70 -39.26 -0.38 -0.37 16 25 C -0.12 0.16 10.03 -39.63 -0.40 -0.23 16 26 C -0.10 0.17 8.59 -39.52 -0.34 -0.17 16 27 C -0.13 0.47 7.29 -25.92 -0.19 0.29 16 28 C -0.21 -0.05 9.04 -39.43 -0.36 -0.41 16 29 C -0.07 -0.01 10.04 -39.60 -0.40 -0.41 16 30 C -0.15 -0.17 10.04 -39.56 -0.40 -0.57 16 31 C -0.08 -0.22 8.66 -39.61 -0.34 -0.56 16 32 H 0.37 1.00 8.60 45.56 0.39 1.39 16 33 H 0.08 0.22 7.83 -51.93 -0.41 -0.18 16 34 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 35 H -0.25 -0.83 6.81 56.52 0.38 -0.45 16 36 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 37 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 38 H 0.40 -2.26 8.70 -40.82 -0.36 -2.62 16 39 H 0.10 -0.28 6.33 -51.93 -0.33 -0.61 16 40 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.13 -0.06 7.88 -52.49 -0.41 -0.48 16 42 H 0.48 -2.53 8.96 -340.36 -3.05 -5.58 16 43 H 0.13 -0.10 7.88 -52.49 -0.41 -0.52 16 44 H 0.13 -0.42 8.06 -52.49 -0.42 -0.85 16 45 H 0.13 -0.45 6.67 -52.48 -0.35 -0.80 16 46 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 47 H 0.10 -0.36 7.71 -51.93 -0.40 -0.77 16 48 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 49 H 0.13 -0.28 8.06 -52.48 -0.42 -0.70 16 50 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 51 H 0.13 0.28 4.94 -52.49 -0.26 0.02 16 LS Contribution 430.37 15.07 6.49 6.49 Total: 0.00 -11.32 430.37 -13.79 -25.11 By element: Atomic # 1 Polarization: -8.78 SS G_CDS: -8.85 Total: -17.63 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: -7.03 Total: -6.04 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: 1.79 Total: 2.56 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: -1.01 Total: -6.31 kcal Atomic # 14 Polarization: 0.99 SS G_CDS: -5.17 Total: -4.17 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -11.32 -13.79 -25.11 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17858608.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.741 kcal (2) G-P(sol) polarization free energy of solvation -11.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.107 kcal (6) G-S(sol) free energy of system = (1) + (5) 108.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds