Wall clock time and date at job start Sat Mar 6 2021 03:30:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.47473 * 2 1 4 4 C 1.50703 * 109.46895 * 239.99988 * 2 1 3 5 5 C 1.38268 * 119.94654 * 300.00685 * 4 2 1 6 6 C 1.38136 * 120.05486 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.94770 * 359.97438 * 6 5 4 8 8 O 1.35896 * 120.05648 * 180.02562 * 7 6 5 9 9 C 1.42900 * 116.99999 * 179.97438 * 8 7 6 10 10 C 1.50698 * 109.47361 * 180.02562 * 9 8 7 11 11 O 1.21287 * 119.99964 * 0.02562 * 10 9 8 12 12 N 1.34778 * 120.00191 * 180.02562 * 10 9 8 13 13 C 1.46507 * 119.99962 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.85188 * 336.20150 * 13 12 10 15 15 C 1.53959 * 113.61048 * 107.46923 * 13 12 10 16 16 C 1.53778 * 87.01947 * 89.19741 * 15 13 12 17 17 H 1.09006 * 113.61505 * 270.76772 * 16 15 13 18 18 C 1.50700 * 113.61313 * 139.95091 * 16 15 13 19 19 C 1.38007 * 119.94332 * 141.11942 * 18 16 15 20 20 C 1.39318 * 119.88129 * 180.23120 * 19 18 16 21 21 C 1.48466 * 120.11371 * 179.77025 * 20 19 18 22 22 N 1.31816 * 126.67175 * 179.72390 * 21 20 19 23 23 N 1.28867 * 107.81675 * 180.02562 * 22 21 20 24 24 N 1.28728 * 109.32153 * 359.97438 * 23 22 21 25 25 N 1.28990 * 108.93833 * 359.72823 * 24 23 22 26 26 C 1.39282 * 119.76589 * 359.48991 * 20 19 18 27 27 C 1.38048 * 119.87959 * 0.25786 * 26 20 19 28 28 C 1.38294 * 120.11726 * 0.02562 * 27 26 20 29 29 C 1.53777 * 87.17471 * 25.36069 * 16 15 13 30 30 C 1.38729 * 119.88597 * 0.27597 * 7 6 5 31 31 C 1.38144 * 119.94472 * 359.42449 * 30 7 6 32 32 H 0.96698 * 113.99365 * 59.99246 * 1 2 3 33 33 H 1.08991 * 109.47058 * 120.00557 * 2 1 3 34 34 H 1.48501 * 110.00213 * 298.68598 * 3 2 1 35 35 H 1.48501 * 109.99912 * 59.99914 * 3 2 1 36 36 H 1.07999 * 119.97083 * 359.96966 * 5 4 2 37 37 H 1.08008 * 120.02796 * 180.02562 * 6 5 4 38 38 H 1.09004 * 109.46954 * 60.00385 * 9 8 7 39 39 H 1.09000 * 109.47602 * 300.00501 * 9 8 7 40 40 H 0.96994 * 120.00150 * 0.02562 * 12 10 9 41 41 H 1.09000 * 113.66584 * 334.67121 * 15 13 12 42 42 H 1.08995 * 113.61380 * 203.72337 * 15 13 12 43 43 H 1.08004 * 120.05819 * 359.97438 * 19 18 16 44 44 H 0.97005 * 125.34170 * 179.97438 * 23 22 21 45 45 H 1.08000 * 120.05425 * 180.22839 * 26 20 19 46 46 H 1.08002 * 119.93765 * 179.97438 * 27 26 20 47 47 H 1.08002 * 119.87679 * 179.97438 * 28 27 26 48 48 H 1.09002 * 113.61640 * 89.15184 * 29 16 15 49 49 H 1.09001 * 113.61419 * 219.97848 * 29 16 15 50 50 H 1.08000 * 120.03020 * 179.72429 * 30 7 6 51 51 H 1.07998 * 119.97425 * 180.32322 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5965 -2.0342 -1.4483 6 6 2.0552 -2.6874 -2.5757 7 6 2.8521 -2.0140 -3.4902 8 8 3.3042 -2.6543 -4.6003 9 6 4.1194 -1.8987 -5.4983 10 6 4.5230 -2.7670 -6.6620 11 8 4.1489 -3.9194 -6.7172 12 7 5.2997 -2.2630 -7.6415 13 6 5.6924 -3.1074 -8.7725 14 1 5.6678 -4.1709 -8.5354 15 6 4.9746 -2.7505 -10.0869 16 6 6.1257 -1.7666 -10.3547 17 1 5.9524 -0.7704 -9.9473 18 6 6.5754 -1.7406 -11.7928 19 6 6.9223 -0.5430 -12.3846 20 6 7.3332 -0.5199 -13.7156 21 6 7.7026 0.7662 -14.3588 22 7 8.1113 0.9367 -15.6004 23 7 8.3315 2.1945 -15.7738 24 7 8.0749 2.8263 -14.6821 25 7 7.6798 1.9806 -13.7919 26 6 7.4018 -1.7082 -14.4389 27 6 7.0575 -2.9012 -13.8357 28 6 6.6446 -2.9178 -12.5159 29 6 6.9961 -2.6579 -9.4532 30 6 3.1910 -0.6874 -3.2667 31 6 2.7246 -0.0368 -2.1409 32 1 -0.3932 0.4418 -0.7650 33 1 1.7924 -0.5139 0.8899 34 1 1.5880 2.4586 -1.2242 35 1 1.5617 2.4678 1.2085 36 1 0.9758 -2.5578 -0.7363 37 1 1.7931 -3.7213 -2.7456 38 1 5.0115 -1.5531 -4.9758 39 1 3.5571 -1.0396 -5.8643 40 1 5.5992 -1.3415 -7.5972 41 1 4.0100 -2.2645 -9.9407 42 1 4.9307 -3.5752 -10.7982 43 1 6.8713 0.3751 -11.8180 44 1 8.6419 2.6014 -16.5979 45 1 7.7232 -1.6961 -15.4698 46 1 7.1099 -3.8232 -14.3958 47 1 6.3758 -3.8534 -12.0480 48 1 7.5058 -3.4574 -9.9909 49 1 7.6620 -2.0974 -8.7971 50 1 3.8149 -0.1623 -3.9749 51 1 2.9838 0.9975 -1.9692 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17861474.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:30:42 Heat of formation + Delta-G solvation = 110.391193 kcal Electronic energy + Delta-G solvation = -35481.435152 eV Core-core repulsion = 30544.985585 eV Total energy + Delta-G solvation = -4936.449567 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.163 amu Computer time = 1.90 seconds Orbital eigenvalues (eV) -45.43639 -41.81676 -41.31583 -40.36907 -39.29800 -38.63279 -37.19822 -35.43408 -34.92849 -34.28085 -32.47949 -32.12740 -31.75646 -31.45606 -29.62054 -26.87017 -26.54101 -26.16803 -25.52467 -25.42972 -24.06310 -23.13404 -22.62020 -22.16581 -21.80954 -20.48756 -19.90408 -19.53332 -18.54006 -18.32448 -18.11854 -17.91231 -17.48776 -17.16766 -16.85560 -16.64670 -16.45741 -16.24218 -16.06293 -15.73938 -15.58688 -15.44756 -15.15897 -14.98731 -14.69328 -14.62364 -14.51559 -14.31172 -14.30565 -13.74367 -13.71570 -13.57685 -13.44944 -13.37058 -13.30603 -12.94781 -12.57344 -12.37203 -12.25871 -12.18617 -12.16895 -12.12217 -12.07080 -11.86490 -11.68620 -11.63220 -11.37416 -10.94100 -10.58828 -10.22119 -10.04721 -9.85508 -9.62990 -9.23075 -4.97653 -0.31255 0.20261 0.27973 0.29392 0.30179 1.25991 1.28834 1.34091 1.37934 1.43151 1.58049 1.96149 2.49649 2.64826 2.65508 2.69653 3.17045 3.30154 3.37757 3.40836 3.54075 3.60887 3.67332 3.72184 3.77199 3.85458 3.85617 3.86913 3.89337 4.01906 4.07214 4.17846 4.25916 4.35237 4.40369 4.43073 4.49818 4.53452 4.55869 4.59733 4.65008 4.71154 4.74479 4.86639 4.88853 4.94553 4.97269 4.99335 5.14252 5.24237 5.32035 5.37470 5.39955 5.42387 5.49501 5.55173 5.67274 5.82975 6.19611 6.33901 6.41709 7.04674 7.15430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.510 6.510 12 N -0.711 5.711 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.144 4.144 16 C -0.073 4.073 17 H 0.101 0.899 18 C -0.074 4.074 19 C -0.072 4.072 20 C -0.016 4.016 21 C 0.217 3.783 22 N -0.293 5.293 23 N -0.225 5.225 24 N -0.046 5.046 25 N -0.269 5.269 26 C -0.083 4.083 27 C -0.118 4.118 28 C -0.095 4.095 29 C -0.135 4.135 30 C -0.206 4.206 31 C -0.075 4.075 32 H 0.376 0.624 33 H 0.118 0.882 34 H -0.261 1.261 35 H -0.257 1.257 36 H 0.135 0.865 37 H 0.136 0.864 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.403 0.597 41 H 0.076 0.924 42 H 0.097 0.903 43 H 0.135 0.865 44 H 0.477 0.523 45 H 0.133 0.867 46 H 0.132 0.868 47 H 0.129 0.871 48 H 0.101 0.899 49 H 0.079 0.921 50 H 0.132 0.868 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.793 2.452 -3.249 6.288 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.156 4.156 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.304 3.696 11 O -0.383 6.383 12 N -0.364 5.364 13 C 0.015 3.985 14 H 0.126 0.874 15 C -0.182 4.182 16 C -0.091 4.091 17 H 0.119 0.881 18 C -0.074 4.074 19 C -0.092 4.092 20 C -0.020 4.020 21 C -0.063 4.063 22 N -0.144 5.144 23 N -0.072 5.072 24 N -0.041 5.041 25 N -0.142 5.142 26 C -0.103 4.103 27 C -0.136 4.136 28 C -0.114 4.114 29 C -0.173 4.173 30 C -0.225 4.225 31 C -0.093 4.093 32 H 0.223 0.777 33 H 0.136 0.864 34 H -0.186 1.186 35 H -0.182 1.182 36 H 0.152 0.848 37 H 0.154 0.846 38 H 0.115 0.885 39 H 0.113 0.887 40 H 0.238 0.762 41 H 0.095 0.905 42 H 0.116 0.884 43 H 0.153 0.847 44 H 0.332 0.668 45 H 0.151 0.849 46 H 0.150 0.850 47 H 0.147 0.853 48 H 0.119 0.881 49 H 0.098 0.902 50 H 0.150 0.850 51 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.445 2.597 -2.805 5.863 hybrid contribution -0.603 0.492 -1.341 1.551 sum 3.841 3.089 -4.146 6.441 Atomic orbital electron populations 1.86601 1.17826 1.79906 1.49341 1.24955 0.83863 1.10745 0.98426 0.95126 0.91696 0.74646 0.80219 1.20203 1.01902 0.95493 0.98002 1.20859 0.96775 0.93422 0.95851 1.20537 1.00424 1.01288 0.94141 1.19076 0.94275 0.91079 0.86682 1.86171 1.64351 1.38591 1.30910 1.22468 0.96516 0.94492 0.90415 1.20032 0.78652 0.88062 0.82898 1.90794 1.52706 1.17594 1.77187 1.45477 1.52724 1.15792 1.22425 1.21911 0.95226 0.96382 0.84940 0.87410 1.23613 0.98073 0.99474 0.97062 1.21615 0.96830 0.99523 0.91177 0.88129 1.19569 0.99652 0.92667 0.95493 1.21056 0.96641 0.98483 0.92988 1.17205 1.04005 0.87035 0.93711 1.23727 1.00533 0.94640 0.87362 1.74929 1.20231 0.99706 1.19584 1.47763 1.42427 1.02775 1.14204 1.78955 1.12380 1.22240 0.90551 1.76087 1.17069 0.98314 1.22714 1.21201 0.97807 0.91104 1.00176 1.21105 0.99430 0.97903 0.95116 1.21216 0.97872 0.98101 0.94193 1.23442 0.95943 1.00007 0.97880 1.21170 1.06220 0.94202 1.00903 1.20787 0.96102 0.99210 0.93167 0.77673 0.86430 1.18596 1.18245 0.84755 0.84626 0.88544 0.88687 0.76195 0.90513 0.88424 0.84709 0.66820 0.84945 0.85015 0.85276 0.88098 0.90228 0.85028 0.85258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.66 12.77 -35.23 -0.45 -1.11 16 2 C -0.07 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.68 -0.78 29.78 -169.99 -5.06 -5.84 16 4 C -0.16 -0.01 5.39 -104.60 -0.56 -0.58 16 5 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 7 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 8 O -0.29 -0.67 9.67 -39.32 -0.38 -1.05 16 9 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 10 C 0.52 0.30 7.91 -10.99 -0.09 0.21 16 11 O -0.51 -2.89 16.10 -14.36 -0.23 -3.12 16 12 N -0.71 1.87 5.26 -52.92 -0.28 1.59 16 13 C 0.12 -0.25 4.33 -67.02 -0.29 -0.54 16 14 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 15 C -0.14 0.35 7.27 -25.83 -0.19 0.16 16 16 C -0.07 0.23 3.85 -90.96 -0.35 -0.12 16 17 H 0.10 -0.40 8.08 -51.93 -0.42 -0.82 16 18 C -0.07 0.11 5.29 -104.67 -0.55 -0.45 16 19 C -0.07 0.01 9.36 -39.26 -0.37 -0.36 16 20 C -0.02 -0.02 5.88 -104.89 -0.62 -0.63 16 21 C 0.22 0.49 7.94 -156.31 -1.24 -0.75 16 22 N -0.29 -0.36 12.08 32.17 0.39 0.03 16 23 N -0.23 0.17 7.90 60.35 0.48 0.65 16 24 N -0.05 -0.09 13.47 60.35 0.81 0.73 16 25 N -0.27 -0.86 12.23 32.16 0.39 -0.46 16 26 C -0.08 0.01 9.70 -39.26 -0.38 -0.37 16 27 C -0.12 0.16 10.03 -39.63 -0.40 -0.23 16 28 C -0.10 0.17 8.53 -39.53 -0.34 -0.17 16 29 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 30 C -0.21 0.14 9.04 -39.43 -0.36 -0.22 16 31 C -0.08 0.06 8.66 -39.60 -0.34 -0.29 16 32 H 0.38 -0.56 8.70 45.56 0.40 -0.16 16 33 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 34 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 35 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 36 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 37 H 0.14 0.15 8.06 -52.48 -0.42 -0.28 16 38 H 0.10 -0.41 7.65 -51.93 -0.40 -0.81 16 39 H 0.10 -0.38 7.67 -51.93 -0.40 -0.78 16 40 H 0.40 -2.29 8.70 -40.82 -0.36 -2.65 16 41 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.10 -0.27 6.39 -51.93 -0.33 -0.60 16 43 H 0.14 -0.07 7.88 -52.48 -0.41 -0.48 16 44 H 0.48 -2.55 8.96 -340.37 -3.05 -5.60 16 45 H 0.13 -0.11 7.88 -52.49 -0.41 -0.52 16 46 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 47 H 0.13 -0.45 6.71 -52.49 -0.35 -0.80 16 48 H 0.10 -0.37 7.64 -51.93 -0.40 -0.76 16 49 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 51 H 0.13 -0.35 4.87 -52.49 -0.26 -0.61 16 LS Contribution 431.58 15.07 6.50 6.50 Total: 0.00 -12.45 431.58 -13.67 -26.12 By element: Atomic # 1 Polarization: -10.29 SS G_CDS: -8.83 Total: -19.12 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -7.01 Total: -4.90 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: 1.79 Total: 2.53 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.06 Total: -5.29 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.06 Total: -5.84 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -12.45 -13.67 -26.12 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17861474.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.507 kcal (2) G-P(sol) polarization free energy of solvation -12.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.667 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.116 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.90 seconds