Wall clock time and date at job start Sat Mar 6 2021 03:30:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.38250 * 119.97460 * 244.99417 * 4 2 1 6 6 C 1.38280 * 120.11289 * 179.97438 * 5 4 2 7 7 C 1.38116 * 120.05809 * 0.02562 * 6 5 4 8 8 C 1.38753 * 119.94689 * 359.97327 * 7 6 5 9 9 O 1.35901 * 120.06231 * 180.02562 * 8 7 6 10 10 C 1.42907 * 116.99562 * 0.02562 * 9 8 7 11 11 C 1.50697 * 109.46727 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00373 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99822 * 179.97438 * 11 10 9 14 14 C 1.46497 * 120.00342 * 180.02562 * 13 11 10 15 15 H 1.09008 * 112.84689 * 334.67293 * 14 13 11 16 16 C 1.53782 * 113.61569 * 105.86304 * 14 13 11 17 17 C 1.54052 * 86.98476 * 89.16721 * 16 14 13 18 18 H 1.09005 * 113.60671 * 270.88984 * 17 16 14 19 19 C 1.50688 * 113.62173 * 139.97956 * 17 16 14 20 20 C 1.38010 * 119.94151 * 142.22796 * 19 17 16 21 21 C 1.39329 * 119.87947 * 179.72897 * 20 19 17 22 22 C 1.48460 * 120.11556 * 180.27373 * 21 20 19 23 23 N 1.31812 * 126.67437 * 180.02562 * 22 21 20 24 24 N 1.28868 * 107.81803 * 179.89123 * 23 22 21 25 25 N 1.28731 * 109.31939 * 0.38284 * 24 23 22 26 26 N 1.28987 * 108.94272 * 359.75471 * 25 24 23 27 27 C 1.39280 * 119.76525 * 0.56806 * 21 20 19 28 28 C 1.38044 * 119.87933 * 359.70584 * 27 21 20 29 29 C 1.38297 * 120.12030 * 0.02562 * 28 27 21 30 30 C 1.53775 * 87.07758 * 25.42962 * 17 16 14 31 31 C 1.38165 * 119.97366 * 64.72148 * 4 2 1 32 32 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 33 33 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 34 34 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 35 35 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 36 36 H 1.07999 * 119.94144 * 359.97438 * 5 4 2 37 37 H 1.08005 * 119.97066 * 179.97438 * 6 5 4 38 38 H 1.08006 * 120.03040 * 179.97438 * 7 6 5 39 39 H 1.08996 * 109.46801 * 299.99966 * 10 9 8 40 40 H 1.09004 * 109.46915 * 59.99662 * 10 9 8 41 41 H 0.96999 * 120.00123 * 0.02562 * 13 11 10 42 42 H 1.09000 * 113.61751 * 203.67033 * 16 14 13 43 43 H 1.09001 * 113.61360 * 334.57498 * 16 14 13 44 44 H 1.08001 * 120.06261 * 359.97438 * 20 19 17 45 45 H 0.97001 * 125.34164 * 180.13715 * 24 23 22 46 46 H 1.07998 * 120.05376 * 179.72765 * 27 21 20 47 47 H 1.08006 * 119.93888 * 180.02562 * 28 27 21 48 48 H 1.08003 * 119.87934 * 179.97438 * 29 28 27 49 49 H 1.09003 * 113.62005 * 220.02217 * 30 17 16 50 50 H 1.09000 * 113.69173 * 89.13523 * 30 17 16 51 51 H 1.08003 * 120.02512 * 0.02562 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6388 -0.0118 2.1909 6 6 3.1006 -0.6607 3.3213 7 6 2.8564 -2.0092 3.4932 8 6 2.1466 -2.7128 2.5308 9 8 1.9045 -4.0396 2.6978 10 6 2.4099 -4.6463 3.8889 11 6 2.0470 -6.1089 3.9004 12 8 1.4180 -6.5849 2.9793 13 7 2.4224 -6.8882 4.9340 14 6 2.0701 -8.3101 4.9451 15 1 1.1831 -8.5310 4.3513 16 6 3.2575 -9.2412 4.6485 17 6 3.5304 -9.2425 6.1647 18 1 4.1917 -8.4393 6.4898 19 6 3.9347 -10.5900 6.7043 20 6 4.8949 -10.6767 7.6919 21 6 5.2637 -11.9230 8.1939 22 6 6.2915 -12.0219 9.2606 23 7 6.7359 -13.1267 9.8257 24 7 7.6215 -12.7935 10.7005 25 7 7.7466 -11.5124 10.7133 26 7 6.9441 -11.0046 9.8404 27 6 4.6691 -13.0761 7.6872 28 6 3.7139 -12.9784 6.6954 29 6 3.3475 -11.7385 6.2045 30 6 2.0376 -8.9258 6.3539 31 6 1.6795 -2.0583 1.4004 32 1 -0.3932 0.4418 0.7651 33 1 1.7923 -0.5139 -0.8900 34 1 1.5615 2.4679 -1.2085 35 1 1.5881 2.4585 1.2242 36 1 2.8311 1.0426 2.0582 37 1 3.6535 -0.1127 4.0700 38 1 3.2177 -2.5157 4.3761 39 1 3.4943 -4.5403 3.9185 40 1 1.9731 -4.1569 4.7594 41 1 2.9258 -6.5075 5.6706 42 1 2.9619 -10.2147 4.2573 43 1 4.0461 -8.7699 4.0619 44 1 5.3566 -9.7799 8.0777 45 1 8.1139 -13.4110 11.2638 46 1 4.9547 -14.0448 8.0699 47 1 3.2520 -13.8719 6.3020 48 1 2.6000 -11.6666 5.4283 49 1 1.8417 -8.1999 7.1432 50 1 1.4078 -9.8123 6.4286 51 1 1.1233 -2.6028 0.6517 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17899772.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:30:59 Heat of formation + Delta-G solvation = 111.290801 kcal Electronic energy + Delta-G solvation = -35521.044112 eV Core-core repulsion = 30584.633555 eV Total energy + Delta-G solvation = -4936.410557 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.163 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -45.43260 -41.80689 -41.30726 -40.36245 -39.26843 -38.59319 -37.27596 -35.43012 -34.92127 -34.27326 -32.51539 -32.23332 -31.69391 -31.35111 -29.31547 -26.87017 -26.86796 -26.35348 -25.51565 -25.41912 -23.70089 -23.13782 -22.94640 -22.12834 -21.65957 -20.47785 -19.89023 -19.35624 -18.64218 -18.11524 -18.04898 -17.69664 -17.47103 -17.30204 -17.06630 -16.76686 -16.59821 -16.26354 -16.15607 -15.73091 -15.52238 -15.40122 -15.10091 -14.99775 -14.77126 -14.62310 -14.50573 -14.28926 -14.11322 -13.93705 -13.70485 -13.57281 -13.36904 -13.31063 -12.99786 -12.93544 -12.58584 -12.56195 -12.36745 -12.19618 -12.17050 -12.07411 -11.97803 -11.85747 -11.68138 -11.56816 -11.36398 -10.92913 -10.61964 -10.21125 -9.95708 -9.84972 -9.62565 -9.28118 -4.94518 -0.30847 0.18655 0.20602 0.30661 0.39264 1.25201 1.26268 1.34512 1.42051 1.44548 1.60737 1.97351 2.51123 2.64877 2.65911 2.70105 3.17408 3.30424 3.38785 3.43097 3.55137 3.61807 3.62726 3.73602 3.77297 3.86387 3.86556 3.90120 4.00189 4.02304 4.07772 4.18157 4.18277 4.34840 4.35816 4.40859 4.50369 4.53668 4.56372 4.60394 4.63976 4.71402 4.75156 4.87204 4.89829 4.95632 4.97877 5.00118 5.21991 5.32447 5.34016 5.38008 5.40397 5.42804 5.42927 5.55754 5.63718 5.83482 6.21332 6.35745 6.42227 7.05965 7.15741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.077 4.077 3 Si 0.691 3.309 4 C -0.078 4.078 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.509 6.509 13 N -0.711 5.711 14 C 0.121 3.879 15 H 0.107 0.893 16 C -0.144 4.144 17 C -0.073 4.073 18 H 0.101 0.899 19 C -0.074 4.074 20 C -0.071 4.071 21 C -0.017 4.017 22 C 0.217 3.783 23 N -0.293 5.293 24 N -0.226 5.226 25 N -0.046 5.046 26 N -0.269 5.269 27 C -0.083 4.083 28 C -0.118 4.118 29 C -0.095 4.095 30 C -0.134 4.134 31 C -0.120 4.120 32 H 0.376 0.624 33 H 0.121 0.879 34 H -0.257 1.257 35 H -0.260 1.260 36 H 0.130 0.870 37 H 0.131 0.869 38 H 0.130 0.870 39 H 0.096 0.904 40 H 0.095 0.905 41 H 0.403 0.597 42 H 0.098 0.902 43 H 0.076 0.924 44 H 0.135 0.865 45 H 0.477 0.523 46 H 0.133 0.867 47 H 0.132 0.868 48 H 0.130 0.870 49 H 0.079 0.921 50 H 0.101 0.899 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.009 -1.039 4.933 6.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.173 4.173 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.303 3.697 12 O -0.382 6.382 13 N -0.364 5.364 14 C 0.015 3.985 15 H 0.125 0.875 16 C -0.182 4.182 17 C -0.091 4.091 18 H 0.119 0.881 19 C -0.074 4.074 20 C -0.092 4.092 21 C -0.020 4.020 22 C -0.062 4.062 23 N -0.145 5.145 24 N -0.072 5.072 25 N -0.041 5.041 26 N -0.142 5.142 27 C -0.103 4.103 28 C -0.136 4.136 29 C -0.114 4.114 30 C -0.172 4.172 31 C -0.139 4.139 32 H 0.224 0.776 33 H 0.138 0.862 34 H -0.182 1.182 35 H -0.185 1.185 36 H 0.147 0.853 37 H 0.149 0.851 38 H 0.148 0.852 39 H 0.114 0.886 40 H 0.113 0.887 41 H 0.238 0.762 42 H 0.116 0.884 43 H 0.095 0.905 44 H 0.153 0.847 45 H 0.332 0.668 46 H 0.151 0.849 47 H 0.150 0.850 48 H 0.147 0.853 49 H 0.097 0.903 50 H 0.119 0.881 51 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.754 -0.742 4.002 5.537 hybrid contribution -0.458 -0.706 1.443 1.671 sum 3.296 -1.449 5.445 6.528 Atomic orbital electron populations 1.86627 1.17480 1.79980 1.49252 1.25104 0.84137 1.11163 0.98310 0.94879 0.91620 0.74120 0.80114 1.20089 0.97779 0.93522 0.96420 1.20994 1.01294 1.00000 0.95008 1.20903 0.97591 0.93580 0.97010 1.21302 1.04695 0.96056 1.00365 1.19040 0.95364 0.82427 0.94803 1.86175 1.73778 1.20112 1.39985 1.22458 1.00751 0.91819 0.88791 1.20028 0.79690 0.87399 0.82545 1.90794 1.37895 1.74733 1.34786 1.45480 1.58325 1.09251 1.23392 1.21872 0.99019 0.79360 0.98204 0.87502 1.23636 0.98705 1.00648 0.95247 1.21659 0.96868 0.94340 0.96264 0.88107 1.19562 0.96465 0.94892 0.96447 1.21058 0.96079 0.96644 0.95380 1.17207 0.95378 0.94748 0.94647 1.23724 0.99197 0.84357 0.98958 1.74927 1.06935 1.26692 1.05902 1.47763 1.26295 1.06881 1.26242 1.78953 1.17057 0.92401 1.15715 1.76091 1.06252 1.26061 1.05776 1.21199 0.95449 0.97741 0.95898 1.21105 0.97552 0.98045 0.96850 1.21224 0.99143 0.91866 0.99152 1.23430 0.95802 1.01666 0.96336 1.20285 1.02731 0.93661 0.97214 0.77620 0.86170 1.18207 1.18507 0.85307 0.85100 0.85221 0.88634 0.88725 0.76214 0.88412 0.90486 0.84707 0.66827 0.84944 0.85014 0.85262 0.90264 0.88082 0.84622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.01 12.83 -35.23 -0.45 -1.46 16 2 C -0.08 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.69 -0.61 29.88 -169.99 -5.08 -5.69 16 4 C -0.08 -0.06 5.35 -104.64 -0.56 -0.62 16 5 C -0.16 0.06 8.67 -39.56 -0.34 -0.28 16 6 C -0.07 0.07 10.04 -39.61 -0.40 -0.33 16 7 C -0.21 0.10 9.04 -39.44 -0.36 -0.26 16 8 C 0.13 0.24 6.69 -39.21 -0.26 -0.02 16 9 O -0.29 -0.83 9.67 -39.34 -0.38 -1.21 16 10 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 11 C 0.52 0.48 7.91 -10.99 -0.09 0.40 16 12 O -0.51 -3.08 16.12 -14.35 -0.23 -3.31 16 13 N -0.71 1.67 5.26 -53.02 -0.28 1.39 16 14 C 0.12 -0.22 4.29 -67.12 -0.29 -0.51 16 15 H 0.11 0.00 7.50 -51.92 -0.39 -0.39 16 16 C -0.14 0.32 7.27 -25.78 -0.19 0.13 16 17 C -0.07 0.22 3.87 -90.83 -0.35 -0.14 16 18 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 19 C -0.07 0.10 5.28 -104.68 -0.55 -0.45 16 20 C -0.07 0.00 9.36 -39.26 -0.37 -0.37 16 21 C -0.02 -0.02 5.88 -104.89 -0.62 -0.63 16 22 C 0.22 0.51 7.94 -156.30 -1.24 -0.73 16 23 N -0.29 -0.38 12.08 32.17 0.39 0.01 16 24 N -0.23 0.16 7.90 60.35 0.48 0.64 16 25 N -0.05 -0.09 13.47 60.35 0.81 0.72 16 26 N -0.27 -0.87 12.23 32.16 0.39 -0.47 16 27 C -0.08 0.00 9.70 -39.27 -0.38 -0.38 16 28 C -0.12 0.15 10.03 -39.63 -0.40 -0.25 16 29 C -0.10 0.16 8.61 -39.53 -0.34 -0.18 16 30 C -0.13 0.45 7.28 -25.92 -0.19 0.26 16 31 C -0.12 -0.27 9.62 -39.43 -0.38 -0.65 16 32 H 0.38 -0.39 8.70 45.56 0.40 0.01 16 33 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 34 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 35 H -0.26 -0.22 7.01 56.52 0.40 0.18 16 36 H 0.13 -0.26 4.84 -52.49 -0.25 -0.52 16 37 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 38 H 0.13 -0.41 6.30 -52.48 -0.33 -0.74 16 39 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 40 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 41 H 0.40 -2.18 8.70 -40.82 -0.36 -2.54 16 42 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 43 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.14 -0.06 7.88 -52.49 -0.41 -0.47 16 45 H 0.48 -2.52 8.96 -340.37 -3.05 -5.57 16 46 H 0.13 -0.10 7.88 -52.49 -0.41 -0.51 16 47 H 0.13 -0.41 8.06 -52.48 -0.42 -0.83 16 48 H 0.13 -0.43 6.65 -52.48 -0.35 -0.78 16 49 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 50 H 0.10 -0.35 7.73 -51.93 -0.40 -0.75 16 51 H 0.14 0.39 8.06 -52.48 -0.42 -0.03 16 LS Contribution 431.69 15.07 6.51 6.51 Total: 0.00 -12.59 431.69 -13.69 -26.27 By element: Atomic # 1 Polarization: -9.76 SS G_CDS: -8.84 Total: -18.60 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -7.01 Total: -4.80 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: 1.79 Total: 2.29 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -1.06 Total: -5.98 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.08 Total: -5.69 kcal Total LS contribution 6.51 Total: 6.51 kcal Total: -12.59 -13.69 -26.27 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17899772.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.565 kcal (2) G-P(sol) polarization free energy of solvation -12.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.275 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.291 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds