Wall clock time and date at job start Sat Mar 6 2021 03:31:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47386 * 2 1 4 4 C 1.50704 * 109.47162 * 119.99883 * 2 1 3 5 5 C 1.35449 * 125.56517 * 245.04372 * 4 2 1 6 6 C 1.39836 * 107.86305 * 179.70526 * 5 4 2 7 7 C 1.37874 * 107.08599 * 0.41307 * 6 5 4 8 8 C 1.46676 * 126.23428 * 179.85038 * 7 6 5 9 9 O 1.21699 * 120.00214 * 359.68869 * 8 7 6 10 10 N 1.34775 * 120.00203 * 179.69219 * 8 7 6 11 11 C 1.46500 * 120.00395 * 179.97438 * 10 8 7 12 12 H 1.09007 * 112.84813 * 23.80390 * 11 10 8 13 13 C 1.53780 * 113.61769 * 154.99823 * 11 10 8 14 14 C 1.53779 * 87.07820 * 89.20273 * 13 11 10 15 15 H 1.09003 * 113.61553 * 270.79606 * 14 13 11 16 16 C 1.50696 * 113.61464 * 139.98615 * 14 13 11 17 17 C 1.38007 * 119.94544 * 119.99945 * 16 14 13 18 18 C 1.39319 * 119.88339 * 180.02562 * 17 16 14 19 19 C 1.48467 * 120.12073 * 179.97438 * 18 17 16 20 20 N 1.31806 * 126.67406 * 179.73031 * 19 18 17 21 21 N 1.28874 * 107.81546 * 179.89421 * 20 19 18 22 22 N 1.28729 * 109.31758 * 0.37518 * 21 20 19 23 23 N 1.28989 * 108.94633 * 359.76604 * 22 21 20 24 24 C 1.39285 * 119.76532 * 359.97438 * 18 17 16 25 25 C 1.38052 * 119.88073 * 0.02562 * 24 18 17 26 26 C 1.38288 * 120.11702 * 0.02562 * 25 24 18 27 27 C 1.53774 * 87.08444 * 25.43207 * 14 13 11 28 28 N 1.35533 * 125.55986 * 64.99656 * 4 2 1 29 29 H 0.96702 * 113.99677 * 60.00090 * 1 2 3 30 30 H 1.09000 * 109.47331 * 239.99808 * 2 1 3 31 31 H 1.48503 * 109.99889 * 298.68078 * 3 2 1 32 32 H 1.48505 * 109.99544 * 59.99866 * 3 2 1 33 33 H 1.07999 * 126.07004 * 359.97438 * 5 4 2 34 34 H 1.07995 * 126.46135 * 180.30281 * 6 5 4 35 35 H 0.97008 * 120.00014 * 359.97438 * 10 8 7 36 36 H 1.08997 * 113.61436 * 334.65499 * 13 11 10 37 37 H 1.09001 * 113.61447 * 203.75193 * 13 11 10 38 38 H 1.08000 * 120.06253 * 0.02562 * 17 16 14 39 39 H 0.97000 * 125.34442 * 180.11804 * 21 20 19 40 40 H 1.08001 * 120.05901 * 179.72516 * 24 18 17 41 41 H 1.08000 * 119.93673 * 179.97438 * 25 24 18 42 42 H 1.07995 * 119.88401 * 179.97438 * 26 25 24 43 43 H 1.09004 * 113.61544 * 89.11434 * 27 14 13 44 44 H 1.09003 * 113.61932 * 220.01796 * 27 14 13 45 45 H 0.97002 * 125.68431 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6323 -0.1392 2.2390 6 6 2.9013 -1.1294 3.1890 7 6 2.3526 -2.3030 2.7173 8 6 2.3931 -3.6086 3.3845 9 8 2.9562 -3.7267 4.4570 10 7 1.8069 -4.6775 2.8100 11 6 1.8478 -5.9817 3.4761 12 1 1.9896 -5.9022 4.5540 13 6 0.6940 -6.9154 3.0738 14 6 1.5982 -7.4122 1.9334 15 1 1.4992 -6.8345 1.0144 16 6 1.5156 -8.8990 1.7016 17 6 1.1051 -9.3833 0.4762 18 6 1.0286 -10.7581 0.2635 19 6 0.5871 -11.2849 -1.0525 20 7 0.4731 -12.5526 -1.3948 21 7 0.0610 -12.5959 -2.6152 22 7 -0.0821 -11.3961 -3.0591 23 7 0.2325 -10.5637 -2.1254 24 6 1.3679 -11.6365 1.2898 25 6 1.7773 -11.1414 2.5117 26 6 1.8503 -9.7759 2.7179 27 6 2.7941 -6.9899 2.8030 28 7 1.7547 -2.0250 1.5090 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5880 2.4585 -1.2243 32 1 1.5615 2.4678 1.2085 33 1 2.9269 0.8980 2.3008 34 1 3.4393 -0.9998 4.1164 35 1 1.3578 -4.5834 1.9553 36 1 -0.1946 -6.3875 2.7280 37 1 0.4708 -7.6794 3.8185 38 1 0.8435 -8.6980 -0.3164 39 1 -0.1106 -13.4055 -3.1211 40 1 1.3061 -12.7031 1.1315 41 1 2.0401 -11.8217 3.3082 42 1 2.1707 -9.3927 3.6754 43 1 3.1449 -7.7743 3.4737 44 1 3.6008 -6.5220 2.2387 45 1 1.2851 -2.6637 0.9500 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17902476.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:07 Heat of formation + Delta-G solvation = 161.543893 kcal Electronic energy + Delta-G solvation = -30863.041495 eV Core-core repulsion = 26465.830116 eV Total energy + Delta-G solvation = -4397.211378 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.143 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -45.43541 -42.48186 -41.49883 -40.11517 -38.78662 -37.87784 -35.43172 -34.91647 -34.27070 -32.35444 -31.96172 -31.57748 -31.16965 -27.28156 -26.84603 -26.23710 -25.50743 -25.40976 -23.40550 -23.11076 -22.17146 -21.52618 -21.08801 -20.43771 -19.87156 -19.61582 -18.73505 -18.11821 -18.10173 -17.12737 -16.86019 -16.62211 -16.31098 -16.29605 -15.94612 -15.58082 -15.29843 -15.07776 -14.93053 -14.78563 -14.56842 -14.43209 -14.30166 -14.08852 -13.81705 -13.61487 -13.50760 -13.39531 -13.35003 -12.92173 -12.73949 -12.56152 -12.36918 -12.17839 -12.07547 -11.98533 -11.85596 -11.66915 -11.34347 -11.12160 -10.73565 -10.18781 -10.01699 -9.84787 -9.62261 -9.20700 -4.98600 -0.30792 0.20334 0.30787 0.39462 1.10828 1.26009 1.34469 1.54197 1.59369 1.88796 1.97779 2.14440 2.41324 2.65677 2.70587 3.12945 3.17293 3.33199 3.57630 3.62348 3.70109 3.76877 3.83805 3.89225 4.02628 4.06495 4.08259 4.18216 4.32225 4.35976 4.40941 4.45179 4.51278 4.57950 4.62187 4.75035 4.75985 4.87894 4.91901 4.98132 5.01542 5.05357 5.15117 5.32501 5.39016 5.42695 5.42868 5.56821 5.67407 5.83735 5.87467 6.20255 6.26738 6.44461 7.14359 7.15398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.714 3.286 4 C 0.070 3.930 5 C -0.197 4.197 6 C -0.095 4.095 7 C -0.052 4.052 8 C 0.595 3.405 9 O -0.521 6.521 10 N -0.716 5.716 11 C 0.121 3.879 12 H 0.109 0.891 13 C -0.136 4.136 14 C -0.073 4.073 15 H 0.098 0.902 16 C -0.073 4.073 17 C -0.072 4.072 18 C -0.017 4.017 19 C 0.218 3.782 20 N -0.293 5.293 21 N -0.225 5.225 22 N -0.046 5.046 23 N -0.269 5.269 24 C -0.083 4.083 25 C -0.117 4.117 26 C -0.095 4.095 27 C -0.143 4.143 28 N -0.525 5.525 29 H 0.384 0.616 30 H 0.077 0.923 31 H -0.260 1.260 32 H -0.250 1.250 33 H 0.151 0.849 34 H 0.154 0.846 35 H 0.395 0.605 36 H 0.077 0.923 37 H 0.101 0.899 38 H 0.134 0.866 39 H 0.477 0.523 40 H 0.133 0.867 41 H 0.132 0.868 42 H 0.130 0.870 43 H 0.098 0.902 44 H 0.076 0.924 45 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.386 -1.826 -3.607 4.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.171 4.171 3 Si 0.613 3.387 4 C -0.048 4.048 5 C -0.221 4.221 6 C -0.122 4.122 7 C -0.165 4.165 8 C 0.382 3.618 9 O -0.397 6.397 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.127 0.873 13 C -0.174 4.174 14 C -0.092 4.092 15 H 0.116 0.884 16 C -0.073 4.073 17 C -0.092 4.092 18 C -0.020 4.020 19 C -0.062 4.062 20 N -0.144 5.144 21 N -0.072 5.072 22 N -0.041 5.041 23 N -0.142 5.142 24 C -0.103 4.103 25 C -0.135 4.135 26 C -0.113 4.113 27 C -0.182 4.182 28 N -0.121 5.121 29 H 0.233 0.767 30 H 0.095 0.905 31 H -0.185 1.185 32 H -0.174 1.174 33 H 0.169 0.831 34 H 0.172 0.828 35 H 0.229 0.771 36 H 0.096 0.904 37 H 0.120 0.880 38 H 0.152 0.848 39 H 0.332 0.668 40 H 0.151 0.849 41 H 0.150 0.850 42 H 0.148 0.852 43 H 0.117 0.883 44 H 0.095 0.905 45 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.382 -1.488 -2.969 3.342 hybrid contribution -1.642 -1.278 -1.386 2.500 sum -1.260 -2.766 -4.355 5.311 Atomic orbital electron populations 1.86584 1.17642 1.80505 1.50153 1.24593 0.84650 1.11889 0.96004 0.94311 0.91442 0.72409 0.80574 1.19839 1.03334 0.83666 0.97935 1.20676 1.06472 1.00237 0.94714 1.21316 1.00887 0.89961 1.00026 1.20400 1.10201 0.95863 0.90042 1.17023 0.78253 0.81964 0.84514 1.90874 1.43598 1.84385 1.20807 1.45556 1.57949 1.08609 1.24533 1.21866 0.96699 0.81328 0.98580 0.87253 1.23451 0.97006 0.98773 0.98151 1.21604 0.97580 0.91592 0.98397 0.88361 1.19570 0.99464 0.95054 0.93250 1.21048 0.97358 0.93615 0.97189 1.17205 1.03745 0.93416 0.87626 1.23725 1.01060 0.85152 0.96274 1.74928 1.19151 1.22287 0.98077 1.47763 1.41469 1.10186 1.07753 1.78951 1.15264 0.88260 1.21653 1.76094 1.15613 1.24867 0.97669 1.21201 0.96967 0.99928 0.92185 1.21107 0.99901 0.95517 0.97004 1.21224 0.98030 0.93052 0.99041 1.23585 0.96795 0.98870 0.98923 1.41912 1.43132 1.09387 1.17654 0.76695 0.90483 1.18462 1.17360 0.83107 0.82805 0.77128 0.90435 0.88042 0.84780 0.66821 0.84931 0.84978 0.85220 0.88345 0.90503 0.74721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.20 12.86 -35.23 -0.45 -0.26 16 2 C -0.06 0.09 3.07 36.01 0.11 0.20 16 3 Si 0.71 -1.46 30.56 -169.99 -5.19 -6.66 16 4 C 0.07 0.03 6.50 -81.95 -0.53 -0.50 16 5 C -0.20 -0.18 9.32 -39.98 -0.37 -0.55 16 6 C -0.10 -0.21 10.65 -39.12 -0.42 -0.63 16 7 C -0.05 -0.10 7.06 -81.98 -0.58 -0.67 16 8 C 0.59 1.54 7.79 -12.85 -0.10 1.44 16 9 O -0.52 -3.26 16.48 5.19 0.09 -3.18 16 10 N -0.72 0.50 5.26 -54.32 -0.29 0.22 16 11 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 12 H 0.11 0.06 7.46 -51.93 -0.39 -0.32 16 13 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 14 C -0.07 0.17 3.86 -90.97 -0.35 -0.18 16 15 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 16 C -0.07 0.07 5.28 -104.67 -0.55 -0.49 16 17 C -0.07 -0.03 9.36 -39.26 -0.37 -0.40 16 18 C -0.02 -0.02 5.88 -104.89 -0.62 -0.64 16 19 C 0.22 0.57 7.94 -156.30 -1.24 -0.67 16 20 N -0.29 -0.44 12.08 32.17 0.39 -0.05 16 21 N -0.23 0.12 7.90 60.35 0.48 0.59 16 22 N -0.05 -0.10 13.47 60.35 0.81 0.71 16 23 N -0.27 -0.95 12.23 32.16 0.39 -0.56 16 24 C -0.08 -0.02 9.70 -39.26 -0.38 -0.40 16 25 C -0.12 0.13 10.03 -39.63 -0.40 -0.27 16 26 C -0.09 0.13 8.60 -39.52 -0.34 -0.21 16 27 C -0.14 0.24 7.25 -25.92 -0.19 0.05 16 28 N -0.52 0.11 5.99 -5.69 -0.03 0.08 16 29 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 30 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 31 H -0.26 0.05 7.11 56.52 0.40 0.46 16 32 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 33 H 0.15 -0.15 6.19 -52.49 -0.32 -0.47 16 34 H 0.15 0.26 8.06 -52.49 -0.42 -0.16 16 35 H 0.39 -1.25 7.83 -40.82 -0.32 -1.57 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 37 H 0.10 -0.28 7.72 -51.93 -0.40 -0.68 16 38 H 0.13 0.01 7.88 -52.49 -0.41 -0.41 16 39 H 0.48 -2.44 8.96 -340.36 -3.05 -5.49 16 40 H 0.13 -0.07 7.88 -52.49 -0.41 -0.48 16 41 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 42 H 0.13 -0.40 6.65 -52.49 -0.35 -0.74 16 43 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.42 -1.15 8.19 -40.82 -0.33 -1.49 16 LS Contribution 387.22 15.07 5.84 5.84 Total: 0.00 -11.43 387.22 -12.42 -23.86 By element: Atomic # 1 Polarization: -8.75 SS G_CDS: -7.65 Total: -16.40 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -6.80 Total: -4.19 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: 1.75 Total: 0.99 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.37 Total: -3.43 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.19 Total: -6.66 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -11.43 -12.42 -23.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17902476.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.399 kcal (2) G-P(sol) polarization free energy of solvation -11.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 173.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.856 kcal (6) G-S(sol) free energy of system = (1) + (5) 161.544 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds