Wall clock time and date at job start Sat Mar 6 2021 03:31:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.34459 * 126.48165 * 104.68373 * 4 2 1 6 6 N 1.36566 * 109.98310 * 179.87000 * 5 4 2 7 7 C 1.37826 * 109.86321 * 0.40966 * 6 5 4 8 8 C 1.38643 * 133.38914 * 179.76051 * 7 6 5 9 9 C 1.39319 * 119.67050 * 180.02562 * 8 7 6 10 10 C 1.47581 * 119.83011 * 179.97438 * 9 8 7 11 11 O 1.21589 * 119.99851 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99791 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99901 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.84692 * 336.18968 * 13 12 10 15 15 C 1.53777 * 113.61592 * 107.49937 * 13 12 10 16 16 C 1.53779 * 87.08097 * 89.11772 * 15 13 12 17 17 H 1.09002 * 113.60798 * 270.87923 * 16 15 13 18 18 C 1.50697 * 113.61522 * 139.98456 * 16 15 13 19 19 C 1.38003 * 119.94303 * 142.22978 * 18 16 15 20 20 C 1.39329 * 119.88156 * 179.73157 * 19 18 16 21 21 C 1.48461 * 120.11897 * 180.26964 * 20 19 18 22 22 N 1.31811 * 126.67493 * 179.97438 * 21 20 19 23 23 N 1.28876 * 107.81890 * 179.89487 * 22 21 20 24 24 N 1.28732 * 109.31235 * 0.37149 * 23 22 21 25 25 N 1.28984 * 108.94929 * 359.77024 * 24 23 22 26 26 C 1.39282 * 119.76317 * 0.50919 * 20 19 18 27 27 C 1.38047 * 119.88274 * 359.76120 * 26 20 19 28 28 C 1.38296 * 120.11734 * 359.97438 * 27 26 20 29 29 C 1.53780 * 87.08320 * 25.43170 * 16 15 13 30 30 C 1.40199 * 120.33619 * 359.97438 * 9 8 7 31 31 C 1.36226 * 120.37662 * 0.02562 * 30 9 8 32 32 C 1.39869 * 119.96149 * 359.96333 * 31 30 9 33 33 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 34 34 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 35 35 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 36 36 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 37 37 H 1.07999 * 125.00713 * 0.02562 * 5 4 2 38 38 H 0.97001 * 125.07229 * 180.14045 * 6 5 4 39 39 H 1.08003 * 120.16191 * 359.97438 * 8 7 6 40 40 H 0.96995 * 120.00559 * 359.97438 * 12 10 9 41 41 H 1.09006 * 113.60744 * 203.66420 * 15 13 12 42 42 H 1.09000 * 113.61219 * 334.56405 * 15 13 12 43 43 H 1.07995 * 120.06297 * 359.96882 * 19 18 16 44 44 H 0.96999 * 125.34066 * 180.14126 * 23 22 21 45 45 H 1.07998 * 120.05902 * 179.77814 * 26 20 19 46 46 H 1.07994 * 119.94594 * 180.02562 * 27 26 20 47 47 H 1.07993 * 119.88295 * 180.02562 * 28 27 26 48 48 H 1.09001 * 113.61282 * 220.01907 * 29 16 15 49 49 H 1.08999 * 113.61590 * 89.11938 * 29 16 15 50 50 H 1.08005 * 119.80992 * 180.02562 * 30 9 8 51 51 H 1.08002 * 120.01986 * 180.02562 * 31 30 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4561 -0.1357 -2.3270 6 7 2.8025 -1.0944 -3.2359 7 6 2.4940 -2.3429 -2.7402 8 6 2.6302 -3.6277 -3.2433 9 6 2.2122 -4.7152 -2.4794 10 6 2.3550 -6.0843 -3.0117 11 8 2.8360 -6.2608 -4.1144 12 7 1.9513 -7.1388 -2.2759 13 6 2.0935 -8.4980 -2.8040 14 1 2.1348 -8.5268 -3.8928 15 6 3.2066 -9.3106 -2.1217 16 6 2.1458 -9.7602 -1.1032 17 1 2.0544 -9.0941 -0.2453 18 6 2.2628 -11.2103 -0.7101 19 6 2.0210 -11.5921 0.5939 20 6 2.1241 -12.9339 0.9547 21 6 1.8593 -13.3514 2.3546 22 7 1.9182 -14.5774 2.8351 23 7 1.6243 -14.5242 4.0887 24 7 1.3736 -13.3046 4.4159 25 7 1.5082 -12.5555 3.3745 26 6 2.4812 -13.8816 -0.0015 27 6 2.7264 -13.4881 -1.3018 28 6 2.6173 -12.1557 -1.6558 29 6 1.0979 -9.5015 -2.1985 30 6 1.6566 -4.5157 -1.2078 31 6 1.5192 -3.2568 -0.7059 32 6 1.9343 -2.1547 -1.4606 33 1 -0.3934 0.4418 -0.7650 34 1 1.7923 -0.5138 0.8899 35 1 1.5616 2.4678 1.2086 36 1 3.5346 1.7703 -0.0322 37 1 2.5869 0.9271 -2.4672 38 1 3.2021 -0.9221 -4.1028 39 1 3.0574 -3.7845 -4.2227 40 1 1.5673 -6.9981 -1.3964 41 1 3.5934 -10.1232 -2.7368 42 1 3.9943 -8.6942 -1.6886 43 1 1.7487 -10.8528 1.3324 44 1 1.5934 -15.2843 4.6905 45 1 2.5660 -14.9225 0.2738 46 1 3.0030 -14.2221 -2.0441 47 1 2.8095 -11.8521 -2.6742 48 1 0.1833 -9.0391 -1.8272 49 1 0.9082 -10.3662 -2.8344 50 1 1.3358 -5.3650 -0.6227 51 1 1.0908 -3.1097 0.2746 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857610_17904044.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:09 Heat of formation + Delta-G solvation = 174.463101 kcal Electronic energy + Delta-G solvation = -36936.805081 eV Core-core repulsion = 31999.937881 eV Total energy + Delta-G solvation = -4936.867200 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.159 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -45.50479 -42.44666 -41.57870 -40.46042 -38.96665 -37.82911 -37.41419 -35.48954 -34.93229 -34.25619 -33.22460 -32.08355 -31.45791 -30.70492 -30.38963 -26.66977 -26.66072 -26.34317 -25.66392 -25.51110 -24.50146 -23.63276 -23.06185 -22.15058 -21.59688 -20.76901 -20.43253 -19.80977 -19.42077 -18.40264 -18.18935 -17.92325 -17.56242 -17.10851 -16.93565 -16.56069 -16.32798 -16.23013 -15.95156 -15.75215 -15.54144 -15.38470 -15.19575 -15.05193 -14.88377 -14.73478 -14.59332 -14.43059 -14.30737 -14.15507 -14.00517 -13.48235 -13.42254 -13.30969 -13.06229 -12.83145 -12.63250 -12.45942 -12.43931 -12.27470 -12.26863 -12.24883 -12.05682 -11.91617 -11.73077 -11.57004 -11.20392 -11.10946 -10.76828 -10.28220 -10.12290 -9.76944 -9.55135 -9.34748 -8.77168 -4.96618 -0.30964 -0.29679 0.13997 0.38074 0.40054 1.29812 1.38090 1.39992 1.43471 1.72447 1.90958 1.92725 2.06619 2.27210 2.64093 2.77978 2.87596 3.12650 3.49360 3.61227 3.64626 3.72878 3.74386 3.78559 3.91330 3.94128 3.95807 4.03995 4.10257 4.13138 4.21937 4.26089 4.32106 4.38616 4.43734 4.50426 4.53659 4.58124 4.60653 4.69827 4.79079 4.82216 4.87994 4.90947 4.97733 5.03138 5.07426 5.09649 5.18828 5.23065 5.42702 5.44281 5.47762 5.49427 5.56320 5.57208 5.63144 5.70366 5.95180 5.99532 6.47525 6.56791 6.91905 7.06903 7.14927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.039 4.039 3 Si 0.794 3.206 4 C -0.236 4.236 5 C 0.097 3.903 6 N -0.577 5.577 7 C 0.066 3.934 8 C -0.065 4.065 9 C -0.138 4.138 10 C 0.565 3.435 11 O -0.580 6.580 12 N -0.696 5.696 13 C 0.113 3.887 14 H 0.091 0.909 15 C -0.141 4.141 16 C -0.067 4.067 17 H 0.107 0.893 18 C -0.072 4.072 19 C -0.081 4.081 20 C -0.036 4.036 21 C 0.208 3.792 22 N -0.298 5.298 23 N -0.203 5.203 24 N -0.059 5.059 25 N -0.295 5.295 26 C -0.090 4.090 27 C -0.118 4.118 28 C -0.095 4.095 29 C -0.124 4.124 30 C -0.107 4.107 31 C -0.088 4.088 32 C -0.082 4.082 33 H 0.393 0.607 34 H 0.095 0.905 35 H -0.306 1.306 36 H -0.285 1.285 37 H 0.220 0.780 38 H 0.435 0.565 39 H 0.130 0.870 40 H 0.414 0.586 41 H 0.105 0.895 42 H 0.065 0.935 43 H 0.132 0.868 44 H 0.494 0.506 45 H 0.135 0.865 46 H 0.152 0.848 47 H 0.149 0.851 48 H 0.085 0.915 49 H 0.108 0.892 50 H 0.150 0.850 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.746 1.323 -2.197 2.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.149 4.149 3 Si 0.700 3.300 4 C -0.244 4.244 5 C -0.032 4.032 6 N -0.180 5.180 7 C -0.041 4.041 8 C -0.086 4.086 9 C -0.142 4.142 10 C 0.354 3.646 11 O -0.461 6.461 12 N -0.347 5.347 13 C 0.008 3.992 14 H 0.109 0.891 15 C -0.179 4.179 16 C -0.086 4.086 17 H 0.125 0.875 18 C -0.073 4.073 19 C -0.101 4.101 20 C -0.039 4.039 21 C -0.072 4.072 22 N -0.150 5.150 23 N -0.053 5.053 24 N -0.054 5.054 25 N -0.167 5.167 26 C -0.111 4.111 27 C -0.136 4.136 28 C -0.113 4.113 29 C -0.162 4.162 30 C -0.127 4.127 31 C -0.106 4.106 32 C -0.087 4.087 33 H 0.243 0.757 34 H 0.113 0.887 35 H -0.234 1.234 36 H -0.212 1.212 37 H 0.236 0.764 38 H 0.276 0.724 39 H 0.148 0.852 40 H 0.252 0.748 41 H 0.124 0.876 42 H 0.084 0.916 43 H 0.150 0.850 44 H 0.353 0.647 45 H 0.153 0.847 46 H 0.170 0.830 47 H 0.166 0.834 48 H 0.104 0.896 49 H 0.127 0.873 50 H 0.168 0.832 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.032 1.576 -1.462 2.150 hybrid contribution 0.279 -1.309 0.560 1.451 sum 0.311 0.267 -0.902 0.991 Atomic orbital electron populations 1.86464 1.17895 1.82305 1.50273 1.24541 0.84612 1.10201 0.95547 0.94083 0.77085 0.73583 0.85240 1.20858 1.12724 0.91522 0.99251 1.22362 0.97089 0.95795 0.87987 1.41814 1.54021 1.03204 1.18963 1.18117 1.03855 0.86941 0.95155 1.20141 0.99675 0.88768 1.00060 1.19462 1.06253 0.91868 0.96648 1.18325 0.76808 0.85296 0.84135 1.90761 1.46557 1.86773 1.21987 1.45490 1.63082 1.05030 1.21102 1.21916 0.97756 0.80528 0.99020 0.89123 1.23579 0.96619 0.99938 0.97761 1.21592 0.97298 0.91864 0.97819 0.87521 1.19693 0.99278 0.95864 0.92420 1.21125 0.98058 0.94178 0.96763 1.17378 1.05924 0.94813 0.85777 1.24036 1.00932 0.85180 0.97030 1.74894 1.21481 1.23570 0.95072 1.47820 1.40996 1.10109 1.06397 1.78879 1.15255 0.90046 1.21260 1.76067 1.18148 1.26401 0.96090 1.21318 0.97343 0.99450 0.92949 1.21368 0.99566 0.96886 0.95782 1.21491 0.96863 0.92540 1.00442 1.23403 0.97054 0.98801 0.96905 1.20886 0.99618 0.98028 0.94155 1.20387 0.99272 0.90846 1.00095 1.19582 1.00937 0.94292 0.93927 0.75715 0.88702 1.23409 1.21197 0.76424 0.72433 0.85205 0.74804 0.87649 0.91609 0.85012 0.64733 0.84674 0.83016 0.83384 0.89613 0.87339 0.83221 0.84702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.17 12.88 -148.98 -1.92 -2.09 16 2 C -0.04 0.04 3.06 71.24 0.22 0.26 16 3 Si 0.79 -3.66 30.76 68.60 2.11 -1.55 16 4 C -0.24 0.07 5.57 -18.64 -0.10 -0.03 16 5 C 0.10 -0.55 10.43 83.09 0.87 0.31 16 6 N -0.58 2.07 6.07 -187.71 -1.14 0.93 16 7 C 0.07 0.21 7.26 38.96 0.28 0.50 16 8 C -0.07 -0.36 9.61 22.63 0.22 -0.14 16 9 C -0.14 -0.71 5.87 -20.08 -0.12 -0.83 16 10 C 0.57 3.93 7.76 86.71 0.67 4.60 16 11 O -0.58 -8.44 15.91 -4.00 -0.06 -8.51 16 12 N -0.70 -0.09 5.21 -443.15 -2.31 -2.40 16 13 C 0.11 -0.11 4.32 45.52 0.20 0.09 16 14 H 0.09 0.26 7.46 -2.39 -0.02 0.24 16 15 C -0.14 0.35 7.25 31.12 0.23 0.57 16 16 C -0.07 0.28 3.85 -11.02 -0.04 0.23 16 17 H 0.11 -0.56 8.09 -2.39 -0.02 -0.58 16 18 C -0.07 0.10 5.28 -19.90 -0.11 0.00 16 19 C -0.08 -0.17 9.36 22.48 0.21 0.04 16 20 C -0.04 -0.14 5.88 -20.04 -0.12 -0.26 16 21 C 0.21 1.39 7.94 137.38 1.09 2.48 16 22 N -0.30 -1.17 12.08 -52.13 -0.63 -1.80 16 23 N -0.20 0.05 7.90 37.02 0.29 0.35 16 24 N -0.06 -0.33 13.47 37.02 0.50 0.16 16 25 N -0.29 -2.59 12.23 -52.18 -0.64 -3.23 16 26 C -0.09 -0.09 9.70 22.48 0.22 0.13 16 27 C -0.12 0.29 10.03 22.24 0.22 0.51 16 28 C -0.09 0.29 8.60 22.31 0.19 0.48 16 29 C -0.12 0.62 7.29 31.12 0.23 0.85 16 30 C -0.11 -0.15 9.46 22.28 0.21 0.06 16 31 C -0.09 -0.28 10.03 22.20 0.22 -0.06 16 32 C -0.08 -0.34 6.35 -20.14 -0.13 -0.47 16 33 H 0.39 -3.19 8.70 -74.05 -0.64 -3.83 16 34 H 0.10 0.16 7.96 -2.39 -0.02 0.14 16 35 H -0.31 -1.23 7.11 99.48 0.71 -0.53 16 36 H -0.29 -0.07 7.11 99.48 0.71 0.64 16 37 H 0.22 -3.23 6.35 -2.91 -0.02 -3.25 16 38 H 0.44 -4.05 8.96 -92.71 -0.83 -4.88 16 39 H 0.13 0.75 7.62 -2.91 -0.02 0.73 16 40 H 0.41 -2.08 6.69 -92.71 -0.62 -2.70 16 41 H 0.11 -0.45 6.30 -2.38 -0.02 -0.47 16 42 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 43 H 0.13 0.26 7.88 -2.91 -0.02 0.24 16 44 H 0.49 -4.89 8.96 -347.53 -3.12 -8.01 16 45 H 0.14 -0.05 7.88 -2.91 -0.02 -0.07 16 46 H 0.15 -1.05 8.06 -2.91 -0.02 -1.07 16 47 H 0.15 -1.06 6.65 -2.91 -0.02 -1.08 16 48 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 49 H 0.11 -0.68 7.72 -2.39 -0.02 -0.70 16 50 H 0.15 -0.74 6.36 -2.91 -0.02 -0.76 16 51 H 0.14 0.18 8.06 -2.91 -0.02 0.15 16 Total: 0.00 -31.88 431.64 -3.23 -35.11 By element: Atomic # 1 Polarization: -22.21 SS G_CDS: -4.10 Total: -26.30 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 4.66 Total: 9.32 kcal Atomic # 7 Polarization: -2.06 SS G_CDS: -3.92 Total: -5.99 kcal Atomic # 8 Polarization: -8.62 SS G_CDS: -1.98 Total: -10.60 kcal Atomic # 14 Polarization: -3.66 SS G_CDS: 2.11 Total: -1.55 kcal Total: -31.88 -3.23 -35.11 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17904044.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 209.575 kcal (2) G-P(sol) polarization free energy of solvation -31.878 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 177.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.112 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.463 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds