Wall clock time and date at job start Sat Mar 6 2021 03:31:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37642 * 125.67711 * 2 1 4 4 C 1.46669 * 126.22349 * 359.96165 * 3 2 1 5 5 O 1.21693 * 120.00217 * 5.22941 * 4 3 2 6 6 N 1.34776 * 119.99845 * 185.23202 * 4 3 2 7 7 C 1.46505 * 120.00265 * 174.57052 * 6 4 3 8 8 H 1.09005 * 112.84646 * 336.20035 * 7 6 4 9 9 C 1.53957 * 113.53705 * 107.50401 * 7 6 4 10 10 C 1.53775 * 87.01629 * 89.19217 * 9 7 6 11 11 H 1.09005 * 113.61314 * 270.76720 * 10 9 7 12 12 C 1.50703 * 113.61213 * 139.95609 * 10 9 7 13 13 C 1.38005 * 119.94018 * 140.88258 * 12 10 9 14 14 C 1.39327 * 119.87778 * 179.97438 * 13 12 10 15 15 C 1.48461 * 120.11476 * 179.97438 * 14 13 12 16 16 N 1.31818 * 126.67397 * 179.97438 * 15 14 13 17 17 N 1.28869 * 107.81943 * 180.02562 * 16 15 14 18 18 N 1.28736 * 109.31750 * 0.02562 * 17 16 15 19 19 N 1.28988 * 108.94027 * 359.72027 * 18 17 16 20 20 C 1.39277 * 119.76489 * 359.97438 * 14 13 12 21 21 C 1.38049 * 119.88296 * 359.97438 * 20 14 13 22 22 C 1.38284 * 120.11624 * 0.02611 * 21 20 14 23 23 C 1.53773 * 87.17506 * 25.36251 * 10 9 7 24 24 C 1.37886 * 107.54760 * 180.22654 * 3 2 1 25 25 C 1.39878 * 107.09021 * 359.58056 * 24 3 2 26 26 Br 1.89104 * 126.07000 * 180.16127 * 25 24 3 27 27 C 1.35504 * 107.85565 * 0.42162 * 25 24 3 28 28 C 1.50698 * 125.56882 * 179.72041 * 27 25 24 29 29 O 1.42899 * 109.46940 * 293.73839 * 28 27 25 30 30 Si 1.86291 * 109.47443 * 53.74248 * 28 27 25 31 31 H 1.09007 * 109.46933 * 92.97925 * 1 2 3 32 32 H 1.08998 * 109.47234 * 212.98115 * 1 2 3 33 33 H 1.09002 * 109.46882 * 332.98146 * 1 2 3 34 34 H 0.96997 * 120.00244 * 354.57753 * 6 4 3 35 35 H 1.09000 * 113.66196 * 334.66093 * 9 7 6 36 36 H 1.08998 * 113.61026 * 203.71582 * 9 7 6 37 37 H 1.07995 * 120.06214 * 359.97438 * 13 12 10 38 38 H 0.96998 * 125.34345 * 179.97438 * 17 16 15 39 39 H 1.08007 * 120.05926 * 180.27754 * 20 14 13 40 40 H 1.08005 * 119.93711 * 179.97438 * 21 20 14 41 41 H 1.08007 * 119.88122 * 179.97438 * 22 21 20 42 42 H 1.09003 * 113.61687 * 89.16030 * 23 10 9 43 43 H 1.09003 * 113.61346 * 220.06126 * 23 10 9 44 44 H 1.07997 * 126.45092 * 179.73679 * 24 3 2 45 45 H 1.08999 * 109.46784 * 173.74672 * 28 27 25 46 46 H 0.96703 * 114.00049 * 60.00240 * 29 28 27 47 47 H 1.48494 * 110.00170 * 63.69311 * 30 28 27 48 48 H 1.48501 * 110.00187 * 185.01300 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5122 -0.0008 5 8 0.6255 2.7646 0.0945 6 7 2.7077 3.5138 -0.1071 7 6 2.2465 4.8991 -0.2277 8 1 1.2347 4.9752 -0.6261 9 6 2.4768 5.7366 1.0434 10 6 3.8563 6.0905 0.4634 11 1 4.6406 5.3864 0.7415 12 6 4.2539 7.5271 0.6854 13 6 5.5610 7.8393 0.9994 14 6 5.9274 9.1679 1.2038 15 6 7.3319 9.5097 1.5424 16 7 7.8180 10.7153 1.7610 17 7 9.0738 10.5926 2.0231 18 7 9.3988 9.3477 1.9770 19 7 8.3514 8.6519 1.6895 20 6 4.9713 10.1742 1.0895 21 6 3.6668 9.8509 0.7740 22 6 3.3086 8.5306 0.5721 23 6 3.2552 5.8256 -0.9270 24 6 3.5782 0.6890 -0.0052 25 6 3.5528 -0.7095 0.0014 26 35 5.0609 -1.8504 0.0028 27 6 2.2558 -1.1016 0.0009 28 6 1.7713 -2.5286 0.0008 29 8 2.1324 -3.1541 -1.2322 30 14 2.5546 -3.4504 1.4176 31 1 -0.3633 -0.0534 -1.0264 32 1 -0.3633 -0.8620 0.5594 33 1 -0.3633 0.9155 0.4669 34 1 3.6576 3.3174 -0.1039 35 1 2.5260 5.1424 1.9558 36 1 1.8068 6.5921 1.1299 37 1 6.2986 7.0553 1.0864 38 1 9.6793 11.3235 2.2230 39 1 5.2510 11.2061 1.2427 40 1 2.9246 10.6305 0.6856 41 1 2.2868 8.2820 0.3259 42 1 2.7986 6.7055 -1.3802 43 1 3.9321 5.3031 -1.6029 44 1 4.4583 1.3149 -0.0106 45 1 0.6872 -2.5442 0.1123 46 1 3.0848 -3.1761 -1.3980 47 1 2.1156 -2.8645 2.7094 48 1 2.1807 -4.8863 1.3579 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17904700.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:19 Heat of formation + Delta-G solvation = 167.678427 kcal Electronic energy + Delta-G solvation = -35291.638009 eV Core-core repulsion = 30399.337022 eV Total energy + Delta-G solvation = -4892.300987 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.069 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -45.40961 -42.88703 -41.55737 -40.20283 -38.84789 -37.83508 -35.44714 -35.14172 -34.55528 -34.09743 -32.46771 -31.93309 -31.40137 -30.91540 -27.46523 -27.39463 -26.84512 -26.20836 -25.48191 -25.36220 -23.55565 -23.10081 -22.23649 -21.59713 -20.64846 -20.37133 -19.83096 -19.08144 -18.32714 -18.09268 -17.96141 -17.35423 -17.09762 -16.64318 -16.57061 -16.36253 -15.88450 -15.73720 -15.65803 -15.25886 -15.09985 -14.87019 -14.68517 -14.61573 -14.49422 -14.42354 -14.28558 -13.99902 -13.85445 -13.62024 -13.41697 -13.33971 -13.23774 -12.92783 -12.57361 -12.54533 -12.34623 -12.24479 -12.15698 -12.07138 -12.00223 -11.84058 -11.66490 -11.59242 -11.35573 -11.07822 -10.80970 -10.23821 -9.85691 -9.83162 -9.60942 -9.32645 -4.91586 -0.29019 0.15928 0.22801 0.32594 0.46507 0.93381 1.17550 1.28372 1.36555 1.48364 1.65209 1.93966 2.16856 2.20377 2.67981 2.71980 3.18089 3.19521 3.32255 3.41038 3.49619 3.57875 3.63458 3.63968 3.80348 3.83522 3.89832 4.04060 4.08589 4.09982 4.20439 4.24376 4.35902 4.37395 4.42564 4.50357 4.54532 4.56432 4.60811 4.62641 4.74110 4.77167 4.89121 4.92068 4.99461 5.02342 5.23933 5.34350 5.40408 5.42788 5.44614 5.56699 5.58356 5.77219 5.85172 6.31823 6.32534 7.02610 7.17996 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.386 5.386 3 C -0.038 4.038 4 C 0.597 3.403 5 O -0.539 6.539 6 N -0.700 5.700 7 C 0.122 3.878 8 H 0.107 0.893 9 C -0.143 4.143 10 C -0.073 4.073 11 H 0.101 0.899 12 C -0.073 4.073 13 C -0.071 4.071 14 C -0.016 4.016 15 C 0.217 3.783 16 N -0.293 5.293 17 N -0.226 5.226 18 N -0.046 5.046 19 N -0.268 5.268 20 C -0.083 4.083 21 C -0.118 4.118 22 C -0.095 4.095 23 C -0.135 4.135 24 C -0.102 4.102 25 C -0.177 4.177 26 Br 0.019 6.981 27 C 0.060 3.940 28 C -0.049 4.049 29 O -0.529 6.529 30 Si 0.656 3.344 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.115 0.885 34 H 0.405 0.595 35 H 0.077 0.923 36 H 0.097 0.903 37 H 0.136 0.864 38 H 0.477 0.523 39 H 0.132 0.868 40 H 0.132 0.868 41 H 0.129 0.871 42 H 0.101 0.899 43 H 0.080 0.920 44 H 0.159 0.841 45 H 0.117 0.883 46 H 0.380 0.620 47 H -0.246 1.246 48 H -0.235 1.235 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.077 3.382 -0.334 3.983 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.059 5.059 3 C -0.152 4.152 4 C 0.384 3.616 5 O -0.417 6.417 6 N -0.350 5.350 7 C 0.017 3.983 8 H 0.125 0.875 9 C -0.182 4.182 10 C -0.092 4.092 11 H 0.120 0.880 12 C -0.073 4.073 13 C -0.091 4.091 14 C -0.019 4.019 15 C -0.063 4.063 16 N -0.145 5.145 17 N -0.072 5.072 18 N -0.041 5.041 19 N -0.141 5.141 20 C -0.103 4.103 21 C -0.136 4.136 22 C -0.114 4.114 23 C -0.173 4.173 24 C -0.129 4.129 25 C -0.262 4.262 26 Br 0.103 6.897 27 C -0.062 4.062 28 C -0.160 4.160 29 O -0.334 6.334 30 Si 0.553 3.447 31 H 0.104 0.896 32 H 0.104 0.896 33 H 0.134 0.866 34 H 0.241 0.759 35 H 0.096 0.904 36 H 0.115 0.885 37 H 0.154 0.846 38 H 0.332 0.668 39 H 0.150 0.850 40 H 0.149 0.851 41 H 0.147 0.853 42 H 0.119 0.881 43 H 0.099 0.901 44 H 0.176 0.824 45 H 0.134 0.866 46 H 0.228 0.772 47 H -0.170 1.170 48 H -0.159 1.159 Dipole moment (debyes) X Y Z Total from point charges 1.227 2.484 0.510 2.817 hybrid contribution -0.244 1.248 -0.222 1.291 sum 0.983 3.732 0.288 3.869 Atomic orbital electron populations 1.22509 0.74971 1.06223 1.04753 1.43802 1.07218 1.03936 1.50906 1.20000 0.89774 0.87794 1.17630 1.16796 0.85619 0.83126 0.76025 1.90809 1.16229 1.84549 1.50138 1.45282 1.09749 1.05505 1.74514 1.21920 0.99638 0.79473 0.97243 0.87475 1.23609 0.96070 1.00232 0.98264 1.21618 0.97620 0.92887 0.97034 0.88041 1.19569 0.92846 0.95071 0.99850 1.21068 0.96122 0.94961 0.96965 1.17205 0.85843 0.94286 1.04605 1.23727 0.96531 0.84646 1.01367 1.74926 0.94363 1.24910 1.20283 1.47764 1.06467 1.09075 1.43889 1.78960 1.21253 0.89536 1.14353 1.76093 0.95363 1.25977 1.16682 1.21196 0.92519 0.99096 0.97490 1.21096 0.95889 0.96670 0.99940 1.21206 0.99607 0.92404 0.98188 1.23451 0.98025 0.99737 0.96108 1.21178 0.95200 0.92808 1.03732 1.20651 0.90770 0.94618 1.20195 1.96599 1.35135 1.60852 1.97124 1.20952 0.89541 0.89980 1.05734 1.24753 1.04527 0.88754 0.97928 1.86536 1.29726 1.79268 1.37880 0.93813 0.94807 0.80298 0.75796 0.89623 0.89647 0.86618 0.75917 0.90442 0.88457 0.84645 0.66837 0.84967 0.85051 0.85316 0.88057 0.90134 0.82360 0.86568 0.77170 1.17010 1.15864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.00 10.35 59.85 0.62 0.62 16 2 N -0.39 -0.55 3.16 -115.58 -0.37 -0.92 16 3 C -0.04 -0.04 6.88 -81.98 -0.56 -0.61 16 4 C 0.60 0.80 7.77 -12.86 -0.10 0.70 16 5 O -0.54 -2.27 14.23 5.20 0.07 -2.19 16 6 N -0.70 1.14 5.24 -54.23 -0.28 0.86 16 7 C 0.12 -0.24 4.30 -67.03 -0.29 -0.53 16 8 H 0.11 -0.06 7.53 -51.93 -0.39 -0.45 16 9 C -0.14 0.33 7.27 -25.83 -0.19 0.14 16 10 C -0.07 0.21 3.85 -90.96 -0.35 -0.14 16 11 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 12 C -0.07 0.10 5.29 -104.67 -0.55 -0.46 16 13 C -0.07 -0.01 9.36 -39.26 -0.37 -0.38 16 14 C -0.02 -0.02 5.88 -104.89 -0.62 -0.64 16 15 C 0.22 0.53 7.94 -156.30 -1.24 -0.71 16 16 N -0.29 -0.40 12.08 32.17 0.39 -0.01 16 17 N -0.23 0.14 7.90 60.35 0.48 0.62 16 18 N -0.05 -0.10 13.47 60.35 0.81 0.72 16 19 N -0.27 -0.91 12.23 32.16 0.39 -0.51 16 20 C -0.08 0.00 9.70 -39.26 -0.38 -0.38 16 21 C -0.12 0.15 10.03 -39.63 -0.40 -0.24 16 22 C -0.10 0.16 8.53 -39.53 -0.34 -0.17 16 23 C -0.14 0.45 7.29 -25.93 -0.19 0.26 16 24 C -0.10 0.04 10.34 -39.10 -0.40 -0.36 16 25 C -0.18 -0.05 6.05 -39.94 -0.24 -0.29 16 26 Br 0.02 -0.02 29.39 -68.01 -2.00 -2.02 16 27 C 0.06 0.07 5.49 -81.90 -0.45 -0.38 16 28 C -0.05 -0.03 2.83 36.00 0.10 0.07 16 29 O -0.53 -0.74 12.88 -35.23 -0.45 -1.19 16 30 Si 0.66 0.34 29.54 -169.99 -5.02 -4.69 16 31 H 0.09 -0.05 8.14 -51.92 -0.42 -0.47 16 32 H 0.08 -0.16 7.04 -51.93 -0.37 -0.52 16 33 H 0.12 0.11 6.06 -51.93 -0.31 -0.21 16 34 H 0.41 -1.58 7.60 -40.82 -0.31 -1.89 16 35 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.10 -0.27 6.39 -51.93 -0.33 -0.60 16 37 H 0.14 -0.04 7.88 -52.49 -0.41 -0.45 16 38 H 0.48 -2.48 8.96 -340.37 -3.05 -5.53 16 39 H 0.13 -0.09 7.88 -52.48 -0.41 -0.50 16 40 H 0.13 -0.41 8.06 -52.48 -0.42 -0.84 16 41 H 0.13 -0.44 6.71 -52.48 -0.35 -0.80 16 42 H 0.10 -0.36 7.63 -51.93 -0.40 -0.76 16 43 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 44 H 0.16 -0.52 7.45 -52.49 -0.39 -0.91 16 45 H 0.12 -0.01 6.51 -51.93 -0.34 -0.35 16 46 H 0.38 -0.39 7.31 45.56 0.33 -0.05 16 47 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 48 H -0.24 -0.60 7.11 56.52 0.40 -0.20 16 LS Contribution 419.00 15.07 6.31 6.31 Total: 0.00 -9.68 419.00 -13.65 -23.33 By element: Atomic # 1 Polarization: -8.76 SS G_CDS: -8.04 Total: -16.80 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -5.95 Total: -3.50 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: 1.42 Total: 0.75 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.38 Total: -3.38 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.02 Total: -4.69 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.00 Total: -2.02 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.68 -13.65 -23.33 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17904700.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 191.011 kcal (2) G-P(sol) polarization free energy of solvation -9.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 181.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.333 kcal (6) G-S(sol) free energy of system = (1) + (5) 167.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds