Wall clock time and date at job start Sat Mar 6 2021 03:31:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37642 * 125.67711 * 2 1 4 4 C 1.46669 * 126.22349 * 359.96165 * 3 2 1 5 5 O 1.21693 * 120.00217 * 5.22941 * 4 3 2 6 6 N 1.34776 * 119.99845 * 185.23202 * 4 3 2 7 7 C 1.46505 * 120.00265 * 174.57052 * 6 4 3 8 8 H 1.09005 * 112.84646 * 336.20035 * 7 6 4 9 9 C 1.53957 * 113.53705 * 107.50401 * 7 6 4 10 10 C 1.53775 * 87.01629 * 89.19217 * 9 7 6 11 11 H 1.09005 * 113.61314 * 270.76720 * 10 9 7 12 12 C 1.50703 * 113.61213 * 139.95609 * 10 9 7 13 13 C 1.38005 * 119.94018 * 140.88258 * 12 10 9 14 14 C 1.39327 * 119.87778 * 179.97438 * 13 12 10 15 15 C 1.48461 * 120.11476 * 179.97438 * 14 13 12 16 16 N 1.31818 * 126.67397 * 179.97438 * 15 14 13 17 17 N 1.28869 * 107.81943 * 180.02562 * 16 15 14 18 18 N 1.28736 * 109.31750 * 0.02562 * 17 16 15 19 19 N 1.28988 * 108.94027 * 359.72027 * 18 17 16 20 20 C 1.39277 * 119.76489 * 359.97438 * 14 13 12 21 21 C 1.38049 * 119.88296 * 359.97438 * 20 14 13 22 22 C 1.38284 * 120.11624 * 0.02611 * 21 20 14 23 23 C 1.53773 * 87.17506 * 25.36251 * 10 9 7 24 24 C 1.37886 * 107.54760 * 180.22654 * 3 2 1 25 25 C 1.39878 * 107.09021 * 359.58056 * 24 3 2 26 26 Br 1.89104 * 126.07000 * 180.16127 * 25 24 3 27 27 C 1.35504 * 107.85565 * 0.42162 * 25 24 3 28 28 C 1.50698 * 125.56882 * 179.72041 * 27 25 24 29 29 O 1.42899 * 109.46940 * 293.73839 * 28 27 25 30 30 Si 1.86291 * 109.47443 * 53.74248 * 28 27 25 31 31 H 1.09007 * 109.46933 * 92.97925 * 1 2 3 32 32 H 1.08998 * 109.47234 * 212.98115 * 1 2 3 33 33 H 1.09002 * 109.46882 * 332.98146 * 1 2 3 34 34 H 0.96997 * 120.00244 * 354.57753 * 6 4 3 35 35 H 1.09000 * 113.66196 * 334.66093 * 9 7 6 36 36 H 1.08998 * 113.61026 * 203.71582 * 9 7 6 37 37 H 1.07995 * 120.06214 * 359.97438 * 13 12 10 38 38 H 0.96998 * 125.34345 * 179.97438 * 17 16 15 39 39 H 1.08007 * 120.05926 * 180.27754 * 20 14 13 40 40 H 1.08005 * 119.93711 * 179.97438 * 21 20 14 41 41 H 1.08007 * 119.88122 * 179.97438 * 22 21 20 42 42 H 1.09003 * 113.61687 * 89.16030 * 23 10 9 43 43 H 1.09003 * 113.61346 * 220.06126 * 23 10 9 44 44 H 1.07997 * 126.45092 * 179.73679 * 24 3 2 45 45 H 1.08999 * 109.46784 * 173.74672 * 28 27 25 46 46 H 0.96703 * 114.00049 * 60.00240 * 29 28 27 47 47 H 1.48494 * 110.00170 * 63.69311 * 30 28 27 48 48 H 1.48501 * 110.00187 * 185.01300 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5122 -0.0008 5 8 0.6255 2.7646 0.0945 6 7 2.7077 3.5138 -0.1071 7 6 2.2465 4.8991 -0.2277 8 1 1.2347 4.9752 -0.6261 9 6 2.4768 5.7366 1.0434 10 6 3.8563 6.0905 0.4634 11 1 4.6406 5.3864 0.7415 12 6 4.2539 7.5271 0.6854 13 6 5.5610 7.8393 0.9994 14 6 5.9274 9.1679 1.2038 15 6 7.3319 9.5097 1.5424 16 7 7.8180 10.7153 1.7610 17 7 9.0738 10.5926 2.0231 18 7 9.3988 9.3477 1.9770 19 7 8.3514 8.6519 1.6895 20 6 4.9713 10.1742 1.0895 21 6 3.6668 9.8509 0.7740 22 6 3.3086 8.5306 0.5721 23 6 3.2552 5.8256 -0.9270 24 6 3.5782 0.6890 -0.0052 25 6 3.5528 -0.7095 0.0014 26 35 5.0609 -1.8504 0.0028 27 6 2.2558 -1.1016 0.0009 28 6 1.7713 -2.5286 0.0008 29 8 2.1324 -3.1541 -1.2322 30 14 2.5546 -3.4504 1.4176 31 1 -0.3633 -0.0534 -1.0264 32 1 -0.3633 -0.8620 0.5594 33 1 -0.3633 0.9155 0.4669 34 1 3.6576 3.3174 -0.1039 35 1 2.5260 5.1424 1.9558 36 1 1.8068 6.5921 1.1299 37 1 6.2986 7.0553 1.0864 38 1 9.6793 11.3235 2.2230 39 1 5.2510 11.2061 1.2427 40 1 2.9246 10.6305 0.6856 41 1 2.2868 8.2820 0.3259 42 1 2.7986 6.7055 -1.3802 43 1 3.9321 5.3031 -1.6029 44 1 4.4583 1.3149 -0.0106 45 1 0.6872 -2.5442 0.1123 46 1 3.0848 -3.1761 -1.3980 47 1 2.1156 -2.8645 2.7094 48 1 2.1807 -4.8863 1.3579 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857610_17904700.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:18 Heat of formation + Delta-G solvation = 168.549141 kcal Electronic energy + Delta-G solvation = -35291.600252 eV Core-core repulsion = 30399.337022 eV Total energy + Delta-G solvation = -4892.263230 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.069 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -45.48529 -42.88791 -41.44241 -40.18937 -38.80117 -37.90006 -35.49444 -35.15784 -34.57677 -34.09739 -32.42178 -31.86456 -31.36130 -30.90790 -27.45714 -27.37843 -26.63972 -26.17132 -25.50702 -25.35880 -23.55390 -23.03952 -22.17701 -21.58287 -20.65613 -20.35690 -19.76021 -19.06403 -18.31901 -18.17016 -17.91828 -17.36563 -17.04670 -16.61596 -16.51755 -16.28898 -15.89448 -15.71114 -15.67338 -15.25560 -15.09358 -14.91571 -14.66719 -14.57664 -14.39869 -14.37407 -14.18525 -14.11487 -13.83411 -13.45156 -13.39803 -13.28912 -13.20757 -12.81690 -12.61418 -12.43870 -12.42441 -12.38864 -12.23285 -12.04834 -11.99362 -11.71835 -11.56215 -11.55721 -11.20061 -11.13961 -10.87216 -10.18867 -9.83501 -9.74975 -9.53416 -9.33601 -4.99219 -0.27746 0.13122 0.15962 0.41980 0.48788 0.91111 1.15870 1.31788 1.39795 1.46920 1.56310 1.84919 2.13779 2.25165 2.66152 2.79965 3.14606 3.16982 3.40713 3.50514 3.54763 3.66770 3.74592 3.77629 3.84392 3.98153 4.05970 4.12231 4.12755 4.23348 4.27077 4.28686 4.38272 4.40623 4.45641 4.56044 4.60051 4.63090 4.73038 4.84650 4.88969 4.91549 5.04756 5.10035 5.11397 5.20149 5.29155 5.46186 5.49780 5.52985 5.58152 5.58835 5.71492 5.76781 5.97120 6.37530 6.40747 7.05075 7.08844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.397 5.397 3 C -0.055 4.055 4 C 0.594 3.406 5 O -0.575 6.575 6 N -0.685 5.685 7 C 0.119 3.881 8 H 0.092 0.908 9 C -0.140 4.140 10 C -0.067 4.067 11 H 0.110 0.890 12 C -0.073 4.073 13 C -0.080 4.080 14 C -0.036 4.036 15 C 0.208 3.792 16 N -0.299 5.299 17 N -0.203 5.203 18 N -0.059 5.059 19 N -0.294 5.294 20 C -0.091 4.091 21 C -0.119 4.119 22 C -0.095 4.095 23 C -0.124 4.124 24 C -0.093 4.093 25 C -0.184 4.184 26 Br 0.036 6.964 27 C 0.049 3.951 28 C -0.051 4.051 29 O -0.540 6.540 30 Si 0.710 3.290 31 H 0.087 0.913 32 H 0.100 0.900 33 H 0.103 0.897 34 H 0.417 0.583 35 H 0.066 0.934 36 H 0.103 0.897 37 H 0.134 0.866 38 H 0.494 0.506 39 H 0.134 0.866 40 H 0.151 0.849 41 H 0.148 0.852 42 H 0.108 0.892 43 H 0.088 0.912 44 H 0.187 0.813 45 H 0.122 0.878 46 H 0.389 0.611 47 H -0.278 1.278 48 H -0.264 1.264 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.648 3.921 -0.862 4.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.070 5.070 3 C -0.169 4.169 4 C 0.382 3.618 5 O -0.456 6.456 6 N -0.336 5.336 7 C 0.013 3.987 8 H 0.111 0.889 9 C -0.179 4.179 10 C -0.086 4.086 11 H 0.128 0.872 12 C -0.073 4.073 13 C -0.100 4.100 14 C -0.039 4.039 15 C -0.072 4.072 16 N -0.151 5.151 17 N -0.054 5.054 18 N -0.054 5.054 19 N -0.166 5.166 20 C -0.111 4.111 21 C -0.137 4.137 22 C -0.113 4.113 23 C -0.161 4.161 24 C -0.120 4.120 25 C -0.270 4.270 26 Br 0.120 6.880 27 C -0.073 4.073 28 C -0.161 4.161 29 O -0.347 6.347 30 Si 0.611 3.389 31 H 0.106 0.894 32 H 0.119 0.881 33 H 0.122 0.878 34 H 0.255 0.745 35 H 0.085 0.915 36 H 0.122 0.878 37 H 0.152 0.848 38 H 0.352 0.648 39 H 0.152 0.848 40 H 0.168 0.832 41 H 0.166 0.834 42 H 0.126 0.874 43 H 0.107 0.893 44 H 0.204 0.796 45 H 0.139 0.861 46 H 0.239 0.761 47 H -0.204 1.204 48 H -0.189 1.189 Dipole moment (debyes) X Y Z Total from point charges 1.863 3.047 -0.029 3.571 hybrid contribution -0.409 1.112 -0.033 1.185 sum 1.454 4.159 -0.062 4.406 Atomic orbital electron populations 1.22533 0.74725 1.06287 1.05034 1.43970 1.07657 1.04210 1.51130 1.20167 0.90443 0.87684 1.18648 1.16940 0.85427 0.83700 0.75732 1.90789 1.17711 1.85038 1.52111 1.45210 1.10069 1.05200 1.73160 1.21951 0.99434 0.79396 0.97878 0.88950 1.23601 0.96575 1.00187 0.97527 1.21615 0.97463 0.92231 0.97259 0.87233 1.19712 0.92352 0.95916 0.99291 1.21142 0.96798 0.94633 0.97447 1.17385 0.85601 0.95082 1.05866 1.24043 0.97057 0.84725 1.01344 1.74897 0.94957 1.24690 1.20597 1.47818 1.06269 1.09054 1.42224 1.78885 1.21210 0.90355 1.14959 1.76060 0.95873 1.26816 1.17858 1.21311 0.92984 0.99015 0.97831 1.21361 0.95703 0.97481 0.99178 1.21481 1.00428 0.92157 0.97267 1.23410 0.97389 0.99472 0.95869 1.21541 0.95484 0.92846 1.02108 1.20849 0.91005 0.95242 1.19878 1.96611 1.34044 1.60339 1.96997 1.21070 0.90015 0.89984 1.06257 1.24790 1.04894 0.88750 0.97676 1.86512 1.30750 1.79350 1.38106 0.93140 0.94270 0.77656 0.73787 0.89402 0.88139 0.87821 0.74462 0.91503 0.87823 0.84837 0.64765 0.84813 0.83152 0.83392 0.87366 0.89338 0.79615 0.86109 0.76110 1.20359 1.18908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.05 10.35 127.77 1.32 1.38 16 2 N -0.40 -1.34 3.16 -519.60 -1.64 -2.99 16 3 C -0.06 -0.13 6.88 40.35 0.28 0.15 16 4 C 0.59 1.89 7.77 86.44 0.67 2.56 16 5 O -0.58 -5.62 14.23 -4.32 -0.06 -5.69 16 6 N -0.69 2.44 5.24 -443.72 -2.33 0.11 16 7 C 0.12 -0.50 4.30 45.57 0.20 -0.30 16 8 H 0.09 -0.06 7.53 -2.38 -0.02 -0.07 16 9 C -0.14 0.71 7.27 31.18 0.23 0.93 16 10 C -0.07 0.44 3.85 -11.02 -0.04 0.40 16 11 H 0.11 -0.88 8.08 -2.38 -0.02 -0.90 16 12 C -0.07 0.23 5.29 -19.90 -0.11 0.13 16 13 C -0.08 -0.04 9.36 22.48 0.21 0.17 16 14 C -0.04 -0.10 5.88 -20.04 -0.12 -0.22 16 15 C 0.21 1.18 7.94 137.38 1.09 2.27 16 16 N -0.30 -0.94 12.08 -52.13 -0.63 -1.57 16 17 N -0.20 0.21 7.90 37.02 0.29 0.50 16 18 N -0.06 -0.28 13.47 37.02 0.50 0.22 16 19 N -0.29 -2.25 12.23 -52.18 -0.64 -2.89 16 20 C -0.09 0.00 9.70 22.47 0.22 0.21 16 21 C -0.12 0.41 10.03 22.24 0.22 0.64 16 22 C -0.09 0.43 8.53 22.30 0.19 0.62 16 23 C -0.12 0.96 7.29 31.12 0.23 1.19 16 24 C -0.09 0.16 10.34 22.58 0.23 0.39 16 25 C -0.18 0.00 6.05 22.03 0.13 0.14 16 26 Br 0.04 -0.12 29.39 -20.37 -0.60 -0.72 16 27 C 0.05 0.11 5.49 41.34 0.23 0.34 16 28 C -0.05 -0.08 2.83 71.24 0.20 0.13 16 29 O -0.54 -1.44 12.88 -148.98 -1.92 -3.36 16 30 Si 0.71 1.10 29.54 68.60 2.03 3.12 16 31 H 0.09 0.00 8.14 -2.38 -0.02 -0.02 16 32 H 0.10 -0.29 7.04 -2.39 -0.02 -0.31 16 33 H 0.10 0.38 6.06 -2.39 -0.01 0.36 16 34 H 0.42 -3.70 7.60 -92.71 -0.70 -4.41 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.10 -0.65 6.39 -2.39 -0.02 -0.67 16 37 H 0.13 0.02 7.88 -2.91 -0.02 0.00 16 38 H 0.49 -5.21 8.96 -347.54 -3.12 -8.33 16 39 H 0.13 -0.14 7.88 -2.91 -0.02 -0.16 16 40 H 0.15 -1.16 8.06 -2.91 -0.02 -1.19 16 41 H 0.15 -1.29 6.71 -2.91 -0.02 -1.31 16 42 H 0.11 -0.94 7.63 -2.39 -0.02 -0.96 16 43 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 44 H 0.19 -1.57 7.45 -2.91 -0.02 -1.59 16 45 H 0.12 0.02 6.51 -2.39 -0.02 0.01 16 46 H 0.39 -0.92 7.31 -74.06 -0.54 -1.46 16 47 H -0.28 -1.86 7.11 99.48 0.71 -1.16 16 48 H -0.26 -1.61 7.11 99.48 0.71 -0.91 16 Total: 0.00 -23.34 419.00 -2.85 -26.19 By element: Atomic # 1 Polarization: -20.81 SS G_CDS: -3.23 Total: -24.05 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: 5.38 Total: 11.11 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -4.45 Total: -6.60 kcal Atomic # 8 Polarization: -7.07 SS G_CDS: -1.98 Total: -9.05 kcal Atomic # 14 Polarization: 1.10 SS G_CDS: 2.03 Total: 3.12 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.60 Total: -0.72 kcal Total: -23.34 -2.85 -26.19 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17904700.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 194.737 kcal (2) G-P(sol) polarization free energy of solvation -23.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 171.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.188 kcal (6) G-S(sol) free energy of system = (1) + (5) 168.549 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds