Wall clock time and date at job start Sat Mar 6 2021 03:31:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.46753 * 2 1 4 4 C 1.50699 * 109.46973 * 119.99707 * 2 1 3 5 5 C 1.34849 * 125.89046 * 244.96129 * 4 2 1 6 6 C 1.40894 * 107.41711 * 179.80785 * 5 4 2 7 7 C 1.34857 * 107.41542 * 0.37839 * 6 5 4 8 8 C 1.50696 * 125.88832 * 179.88466 * 7 6 5 9 9 C 1.50698 * 109.47454 * 274.69253 * 8 7 6 10 10 O 1.21279 * 119.99693 * 0.02562 * 9 8 7 11 11 N 1.34771 * 120.00224 * 180.02562 * 9 8 7 12 12 C 1.46496 * 120.00199 * 179.97438 * 11 9 8 13 13 H 1.09001 * 112.85125 * 23.80817 * 12 11 9 14 14 C 1.53781 * 113.61508 * 154.99655 * 12 11 9 15 15 C 1.53783 * 87.07825 * 89.12293 * 14 12 11 16 16 H 1.08998 * 113.61552 * 270.79825 * 15 14 12 17 17 C 1.50700 * 113.61576 * 139.98115 * 15 14 12 18 18 C 1.38014 * 119.94273 * 121.55033 * 17 15 14 19 19 C 1.39315 * 119.88062 * 179.97438 * 18 17 15 20 20 C 1.48469 * 120.11370 * 180.02562 * 19 18 17 21 21 N 1.31814 * 126.67224 * 179.68984 * 20 19 18 22 22 N 1.28871 * 107.81560 * 179.89725 * 21 20 19 23 23 N 1.28736 * 109.31847 * 0.37360 * 22 21 20 24 24 N 1.28981 * 108.94374 * 359.76784 * 23 22 21 25 25 C 1.39271 * 119.76918 * 359.97438 * 19 18 17 26 26 C 1.38055 * 119.88127 * 0.02562 * 25 19 18 27 27 C 1.38292 * 120.11393 * 359.97438 * 26 25 19 28 28 C 1.53777 * 87.17413 * 25.39222 * 15 14 12 29 29 N 1.36338 * 108.21645 * 359.62087 * 7 6 5 30 30 H 0.96697 * 114.00079 * 60.00198 * 1 2 3 31 31 H 1.08991 * 109.47485 * 240.00123 * 2 1 3 32 32 H 1.48501 * 109.99827 * 59.99832 * 3 2 1 33 33 H 1.48500 * 110.00009 * 181.31393 * 3 2 1 34 34 H 1.08001 * 126.29390 * 0.02562 * 5 4 2 35 35 H 1.07997 * 126.29579 * 180.23923 * 6 5 4 36 36 H 1.09005 * 109.47050 * 154.68914 * 8 7 6 37 37 H 1.09003 * 109.47324 * 34.69387 * 8 7 6 38 38 H 0.97004 * 120.00003 * 0.02562 * 11 9 8 39 39 H 1.09000 * 113.61880 * 334.57799 * 14 12 11 40 40 H 1.09003 * 113.61758 * 203.66716 * 14 12 11 41 41 H 1.08001 * 120.05814 * 0.02562 * 18 17 15 42 42 H 0.97001 * 125.34254 * 180.14184 * 22 21 20 43 43 H 1.08001 * 120.06052 * 180.29852 * 25 19 18 44 44 H 1.07997 * 119.94171 * 179.97438 * 26 25 19 45 45 H 1.08006 * 119.87891 * 179.97438 * 27 26 25 46 46 H 1.08998 * 113.62108 * 89.15884 * 28 15 14 47 47 H 1.09004 * 113.61692 * 220.06347 * 28 15 14 48 48 H 0.96995 * 125.63457 * 180.21299 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6307 -0.1487 2.2374 6 6 2.8942 -1.1594 3.1830 7 6 2.3529 -2.3021 2.7138 8 6 2.3934 -3.6445 3.3974 9 6 3.6800 -4.3472 3.0486 10 8 4.4851 -3.8106 2.3174 11 7 3.9361 -5.5720 3.5493 12 6 5.1866 -6.2554 3.2098 13 1 5.9790 -5.5669 2.9163 14 6 5.6272 -7.2906 4.2582 15 6 4.7913 -8.3194 3.4787 16 1 3.7531 -8.3764 3.8057 17 6 5.4460 -9.6725 3.3715 18 6 4.8019 -10.7903 3.8619 19 6 5.4082 -12.0406 3.7617 20 6 4.7197 -13.2466 4.2870 21 7 5.1683 -14.4856 4.2555 22 7 4.2832 -15.2397 4.8111 23 7 3.2847 -14.5189 5.1865 24 7 3.5183 -13.2879 4.8803 25 6 6.6618 -12.1555 3.1660 26 6 7.2974 -11.0310 2.6787 27 6 6.6911 -9.7922 2.7808 28 6 4.9988 -7.4348 2.2381 29 7 1.7577 -2.0319 1.5174 30 1 -0.3933 0.4417 -0.7650 31 1 1.7924 -0.5138 -0.8899 32 1 1.5613 2.4679 1.2085 33 1 3.5345 1.7705 -0.0320 34 1 2.9306 0.8864 2.3079 35 1 3.4327 -1.0414 4.1116 36 1 1.5483 -4.2473 3.0646 37 1 2.3369 -3.5044 4.4769 38 1 3.2919 -6.0014 4.1338 39 1 5.2467 -7.0874 5.2593 40 1 6.6973 -7.4974 4.2449 41 1 3.8293 -10.6960 4.3218 42 1 4.3562 -16.2002 4.9253 43 1 7.1340 -13.1231 3.0814 44 1 8.2697 -11.1189 2.2169 45 1 7.1920 -8.9149 2.3986 46 1 5.8967 -7.6809 1.6714 47 1 4.1117 -7.3476 1.6106 48 1 1.2887 -2.6739 0.9618 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17907336.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:23 Heat of formation + Delta-G solvation = 158.830982 kcal Electronic energy + Delta-G solvation = -32401.049956 eV Core-core repulsion = 27848.183318 eV Total energy + Delta-G solvation = -4552.866638 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.159 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -45.42597 -42.27411 -41.56297 -40.27692 -38.86392 -37.62858 -35.41580 -34.85430 -34.23379 -33.13071 -32.04284 -31.85255 -31.38387 -29.43320 -26.83057 -26.50858 -25.62444 -25.46156 -24.86981 -23.12133 -22.46311 -21.92616 -21.25830 -20.95932 -20.44154 -19.84946 -18.51095 -18.39520 -18.10896 -18.05391 -17.79814 -17.00703 -16.61696 -16.36280 -16.21599 -15.76713 -15.52067 -15.34430 -15.03916 -14.93605 -14.78248 -14.62288 -14.47519 -14.38687 -14.15013 -14.09516 -13.68652 -13.54266 -13.36049 -13.25902 -13.25430 -12.89619 -12.79938 -12.54968 -12.40968 -12.35579 -12.16711 -12.05544 -11.86198 -11.84225 -11.65621 -11.32713 -10.88616 -10.40584 -10.09734 -9.84131 -9.69754 -9.61462 -8.86976 -4.93746 -0.30198 0.21257 0.31479 1.16355 1.26864 1.28675 1.35163 1.62145 1.76530 1.91708 2.11390 2.26540 2.49884 2.66518 2.71078 3.18118 3.35749 3.44108 3.58254 3.63423 3.64854 3.80269 3.89408 3.95169 3.98238 4.03300 4.04703 4.09493 4.19286 4.32775 4.36928 4.37184 4.41990 4.52359 4.57157 4.59405 4.62839 4.77534 4.78211 4.84374 4.89212 4.91641 4.99177 5.05617 5.31377 5.33191 5.37114 5.39836 5.43402 5.47250 5.59521 5.84245 6.07738 6.20766 6.42386 6.56911 6.70024 7.16353 7.21974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.053 4.053 3 Si 0.714 3.286 4 C 0.036 3.964 5 C -0.194 4.194 6 C -0.171 4.171 7 C 0.037 3.963 8 C -0.071 4.071 9 C 0.514 3.486 10 O -0.521 6.521 11 N -0.716 5.716 12 C 0.120 3.880 13 H 0.105 0.895 14 C -0.135 4.135 15 C -0.073 4.073 16 H 0.100 0.900 17 C -0.073 4.073 18 C -0.072 4.072 19 C -0.016 4.016 20 C 0.217 3.783 21 N -0.293 5.293 22 N -0.226 5.226 23 N -0.046 5.046 24 N -0.269 5.269 25 C -0.083 4.083 26 C -0.118 4.118 27 C -0.095 4.095 28 C -0.144 4.144 29 N -0.533 5.533 30 H 0.383 0.617 31 H 0.070 0.930 32 H -0.249 1.249 33 H -0.254 1.254 34 H 0.133 0.867 35 H 0.137 0.863 36 H 0.101 0.899 37 H 0.119 0.881 38 H 0.402 0.598 39 H 0.078 0.922 40 H 0.099 0.901 41 H 0.135 0.865 42 H 0.477 0.523 43 H 0.133 0.867 44 H 0.132 0.868 45 H 0.129 0.871 46 H 0.095 0.905 47 H 0.074 0.926 48 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.584 -2.520 -1.640 3.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.163 4.163 3 Si 0.613 3.387 4 C -0.077 4.077 5 C -0.219 4.219 6 C -0.196 4.196 7 C -0.076 4.076 8 C -0.112 4.112 9 C 0.300 3.700 10 O -0.395 6.395 11 N -0.368 5.368 12 C 0.014 3.986 13 H 0.123 0.877 14 C -0.173 4.173 15 C -0.091 4.091 16 H 0.118 0.882 17 C -0.073 4.073 18 C -0.092 4.092 19 C -0.020 4.020 20 C -0.063 4.063 21 N -0.144 5.144 22 N -0.072 5.072 23 N -0.041 5.041 24 N -0.142 5.142 25 C -0.103 4.103 26 C -0.136 4.136 27 C -0.114 4.114 28 C -0.182 4.182 29 N -0.128 5.128 30 H 0.231 0.769 31 H 0.088 0.912 32 H -0.174 1.174 33 H -0.178 1.178 34 H 0.151 0.849 35 H 0.155 0.845 36 H 0.120 0.880 37 H 0.137 0.863 38 H 0.237 0.763 39 H 0.097 0.903 40 H 0.117 0.883 41 H 0.153 0.847 42 H 0.332 0.668 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.147 0.853 46 H 0.114 0.886 47 H 0.093 0.907 48 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges -0.012 -2.275 -0.986 2.479 hybrid contribution -0.080 -1.869 0.138 1.875 sum -0.092 -4.143 -0.848 4.230 Atomic orbital electron populations 1.86491 1.17522 1.81935 1.49819 1.24427 0.85372 1.11016 0.95479 0.95417 0.80697 0.75812 0.86764 1.19640 1.05844 0.84016 0.98202 1.20526 1.06581 0.99224 0.95530 1.20543 1.05930 0.91736 1.01350 1.19439 1.04147 0.95317 0.88713 1.20132 0.96389 0.92059 1.02615 1.20606 0.88420 0.80857 0.80113 1.90770 1.48056 1.65212 1.35507 1.45681 1.21368 1.18129 1.51633 1.21877 0.87302 0.93333 0.96096 0.87668 1.23436 1.01255 0.94203 0.98447 1.21602 0.99517 0.90134 0.97834 0.88175 1.19586 0.94790 0.94350 0.98621 1.21060 0.99975 0.90311 0.97834 1.17202 0.94549 0.88047 1.02158 1.23730 0.91099 0.91640 0.99790 1.74928 1.18285 1.02918 1.18315 1.47765 1.09549 1.13534 1.36340 1.78954 1.11910 0.97546 1.15710 1.76092 1.14021 1.09408 1.14642 1.21195 0.93226 0.99706 0.96183 1.21103 1.00383 0.92025 1.00057 1.21214 0.94597 0.97895 0.97695 1.23601 1.03350 0.94955 0.96312 1.41754 1.44153 1.09034 1.17838 0.76888 0.91196 1.17379 1.17837 0.84895 0.84465 0.88048 0.86333 0.76347 0.90295 0.88269 0.84710 0.66826 0.84943 0.85023 0.85319 0.88625 0.90724 0.75028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.38 12.86 -35.23 -0.45 -0.83 16 2 C -0.05 -0.05 3.07 36.01 0.11 0.06 16 3 Si 0.71 -0.11 30.60 -169.99 -5.20 -5.31 16 4 C 0.04 0.15 6.53 -81.79 -0.53 -0.39 16 5 C -0.19 -0.98 9.37 -39.78 -0.37 -1.35 16 6 C -0.17 -0.74 10.77 -39.78 -0.43 -1.17 16 7 C 0.04 0.11 5.66 -81.79 -0.46 -0.36 16 8 C -0.07 0.07 6.24 -29.04 -0.18 -0.11 16 9 C 0.51 0.57 7.82 -10.99 -0.09 0.49 16 10 O -0.52 -3.09 15.63 5.56 0.09 -3.00 16 11 N -0.72 1.23 5.26 -52.93 -0.28 0.95 16 12 C 0.12 -0.15 4.33 -67.03 -0.29 -0.44 16 13 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 14 C -0.14 0.36 7.29 -25.92 -0.19 0.17 16 15 C -0.07 0.17 3.85 -90.96 -0.35 -0.18 16 16 H 0.10 -0.31 8.08 -51.93 -0.42 -0.73 16 17 C -0.07 0.06 5.29 -104.67 -0.55 -0.49 16 18 C -0.07 -0.03 9.36 -39.26 -0.37 -0.40 16 19 C -0.02 -0.02 5.88 -104.90 -0.62 -0.64 16 20 C 0.22 0.57 7.94 -156.30 -1.24 -0.67 16 21 N -0.29 -0.44 12.08 32.17 0.39 -0.05 16 22 N -0.23 0.11 7.90 60.35 0.48 0.59 16 23 N -0.05 -0.10 13.47 60.35 0.81 0.71 16 24 N -0.27 -0.95 12.23 32.16 0.39 -0.55 16 25 C -0.08 -0.02 9.70 -39.26 -0.38 -0.40 16 26 C -0.12 0.11 10.03 -39.63 -0.40 -0.28 16 27 C -0.10 0.12 8.53 -39.53 -0.34 -0.22 16 28 C -0.14 0.24 7.27 -25.83 -0.19 0.05 16 29 N -0.53 -1.54 6.07 -5.44 -0.03 -1.57 16 30 H 0.38 -1.73 8.74 45.56 0.40 -1.33 16 31 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 32 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 33 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 34 H 0.13 0.58 6.24 -52.49 -0.33 0.26 16 35 H 0.14 0.39 8.06 -52.49 -0.42 -0.03 16 36 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.12 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.40 -1.79 8.70 -40.82 -0.36 -2.15 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 40 H 0.10 -0.27 7.64 -51.93 -0.40 -0.67 16 41 H 0.14 0.00 7.88 -52.49 -0.41 -0.41 16 42 H 0.48 -2.44 8.96 -340.36 -3.05 -5.49 16 43 H 0.13 -0.06 7.88 -52.49 -0.41 -0.48 16 44 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 45 H 0.13 -0.37 6.71 -52.48 -0.35 -0.72 16 46 H 0.10 -0.19 6.39 -51.93 -0.33 -0.52 16 47 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 48 H 0.41 0.27 8.96 -40.82 -0.37 -0.10 16 LS Contribution 409.53 15.07 6.17 6.17 Total: 0.00 -13.43 409.53 -13.06 -26.50 By element: Atomic # 1 Polarization: -8.71 SS G_CDS: -8.56 Total: -17.27 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -6.86 Total: -6.33 kcal Atomic # 7 Polarization: -1.69 SS G_CDS: 1.76 Total: 0.07 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.37 Total: -3.83 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.20 Total: -5.31 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -13.43 -13.06 -26.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17907336.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.328 kcal (2) G-P(sol) polarization free energy of solvation -13.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 171.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.497 kcal (6) G-S(sol) free energy of system = (1) + (5) 158.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds