Wall clock time and date at job start Sat Mar 6 2021 03:31:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36770 * 125.80143 * 2 1 4 4 C 1.47261 * 126.94458 * 359.97438 * 3 2 1 5 5 O 1.21627 * 119.99609 * 359.71972 * 4 3 2 6 6 N 1.34772 * 119.99906 * 179.71250 * 4 3 2 7 7 C 1.46502 * 119.99772 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.85215 * 23.80262 * 7 6 4 9 9 C 1.53777 * 113.61682 * 155.00009 * 7 6 4 10 10 C 1.53782 * 87.08148 * 89.19506 * 9 7 6 11 11 H 1.08998 * 113.61717 * 270.79846 * 10 9 7 12 12 C 1.50700 * 113.61260 * 139.98164 * 10 9 7 13 13 C 1.38007 * 119.94211 * 120.00549 * 12 10 9 14 14 C 1.39319 * 119.88339 * 179.97438 * 13 12 10 15 15 C 1.48459 * 120.11911 * 180.02562 * 14 13 12 16 16 N 1.31817 * 126.67413 * 179.68797 * 15 14 13 17 17 N 1.28875 * 107.81642 * 179.83456 * 16 15 14 18 18 N 1.28729 * 109.31782 * 0.43413 * 17 16 15 19 19 N 1.28989 * 108.94639 * 359.72839 * 18 17 16 20 20 C 1.39285 * 119.76532 * 359.97438 * 14 13 12 21 21 C 1.38052 * 119.88073 * 0.02562 * 20 14 13 22 22 C 1.38288 * 120.11702 * 359.97438 * 21 20 14 23 23 C 1.53778 * 87.08056 * 25.43690 * 10 9 7 24 24 C 1.46687 * 106.11081 * 179.71924 * 3 2 1 25 25 C 1.34486 * 106.33516 * 0.23630 * 24 3 2 26 26 C 1.50698 * 125.56904 * 179.97438 * 25 24 3 27 27 O 1.42896 * 109.47638 * 300.00156 * 26 25 24 28 28 Si 1.86305 * 109.47066 * 180.02562 * 26 25 24 29 29 N 1.34658 * 125.79946 * 180.12333 * 2 1 3 30 30 H 1.08996 * 109.47176 * 90.00435 * 1 2 3 31 31 H 1.08995 * 109.47712 * 210.00723 * 1 2 3 32 32 H 1.09001 * 109.46929 * 330.00720 * 1 2 3 33 33 H 0.96999 * 120.00149 * 0.02562 * 6 4 3 34 34 H 1.09006 * 113.61597 * 334.65162 * 9 7 6 35 35 H 1.08997 * 113.69441 * 203.75552 * 9 7 6 36 36 H 1.08001 * 120.05687 * 359.95020 * 13 12 10 37 37 H 0.97000 * 125.34422 * 180.17045 * 17 16 15 38 38 H 1.08001 * 120.05901 * 179.72516 * 20 14 13 39 39 H 1.08000 * 119.94219 * 179.97438 * 21 20 14 40 40 H 1.07995 * 119.88385 * 179.97438 * 22 21 20 41 41 H 1.09000 * 113.62039 * 89.11108 * 23 10 9 42 42 H 1.09002 * 113.61550 * 220.01737 * 23 10 9 43 43 H 1.08002 * 126.83293 * 180.21599 * 24 3 2 44 44 H 1.09003 * 109.46964 * 60.00391 * 26 25 24 45 45 H 0.96705 * 114.00093 * 179.97438 * 27 26 25 46 46 H 1.48497 * 109.99538 * 60.00113 * 28 26 25 47 47 H 1.48495 * 110.00158 * 181.32290 * 28 26 25 48 48 H 0.97001 * 124.85383 * 0.07061 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0062 6 7 2.7850 3.5053 0.0054 7 6 2.3505 4.9044 0.0054 8 1 1.3453 5.0354 0.4062 9 6 3.3843 5.8706 0.6074 10 6 3.9715 5.9995 -0.8081 11 1 4.7397 5.2591 -1.0313 12 6 4.3911 7.4030 -1.1620 13 6 5.7059 7.6674 -1.4876 14 6 6.0924 8.9652 -1.8152 15 6 7.5053 9.2554 -2.1668 16 7 8.0087 10.4269 -2.5009 17 7 9.2669 10.2651 -2.7282 18 7 9.5746 9.0268 -2.5576 19 7 8.5160 8.3760 -2.2118 20 6 5.1483 9.9893 -1.8126 21 6 3.8358 9.7138 -1.4854 22 6 3.4575 8.4238 -1.1610 23 6 2.5773 5.6219 -1.3357 24 6 3.6882 0.6150 0.0069 25 6 3.6095 -0.7275 0.0051 26 6 4.7818 -1.6743 0.0099 27 8 5.5815 -1.4484 -1.1526 28 14 4.1614 -3.4310 0.0042 29 7 2.2947 -1.0922 -0.0024 30 1 -0.3633 -0.0001 -1.0276 31 1 -0.3634 -0.8898 0.5139 32 1 -0.3633 0.8901 0.5137 33 1 3.7311 3.2913 0.0096 34 1 4.0610 5.3980 1.3194 35 1 2.9505 6.7960 0.9860 36 1 6.4340 6.8697 -1.4881 37 1 9.8844 10.9656 -2.9907 38 1 5.4436 10.9979 -2.0614 39 1 3.1030 10.5072 -1.4826 40 1 2.4298 8.2127 -0.9052 41 1 1.9214 6.4789 -1.4888 42 1 2.6023 4.9484 -2.1924 43 1 4.5890 1.2108 0.0120 44 1 5.3829 -1.5038 0.9031 45 1 6.3560 -2.0241 -1.2153 46 1 3.3407 -3.6758 -1.2089 47 1 5.3074 -4.3746 0.0411 48 1 1.9733 -2.0074 -0.0053 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17907338.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:28 Heat of formation + Delta-G solvation = 157.399263 kcal Electronic energy + Delta-G solvation = -33034.307516 eV Core-core repulsion = 28481.378794 eV Total energy + Delta-G solvation = -4552.928722 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.159 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -45.36893 -42.41717 -41.37251 -39.95949 -38.60602 -37.91039 -35.35052 -34.74332 -34.09415 -32.84327 -32.31508 -31.74668 -31.17760 -29.00463 -26.68160 -26.59043 -25.73188 -25.40562 -25.11060 -23.41272 -23.02977 -21.98847 -21.38856 -20.59404 -20.30760 -19.69099 -18.76986 -18.20929 -18.05327 -17.93677 -17.01103 -16.89706 -16.49346 -16.29465 -16.11599 -15.84940 -15.54167 -15.23613 -15.11281 -14.86496 -14.65946 -14.53155 -14.46179 -14.31617 -14.11626 -14.05938 -13.63403 -13.45752 -13.41375 -13.29177 -13.21691 -12.92807 -12.80404 -12.51805 -12.44816 -12.29802 -12.15546 -12.09662 -11.95634 -11.72978 -11.53098 -11.17417 -10.80443 -10.53398 -9.94360 -9.75766 -9.73082 -9.52359 -9.06534 -5.25567 -0.23077 0.27169 0.40124 0.83947 0.98393 1.29559 1.32132 1.33860 1.42038 1.69595 2.00525 2.45184 2.71439 2.73042 2.80219 3.24653 3.27475 3.51244 3.65080 3.74217 3.78883 3.90080 3.92547 4.03007 4.11810 4.15374 4.19752 4.24111 4.28411 4.31031 4.45376 4.49658 4.56776 4.60923 4.73065 4.75377 4.76285 4.82044 4.88899 4.92092 5.00908 5.06349 5.09067 5.10826 5.20276 5.34526 5.39831 5.47691 5.50479 5.62337 5.75700 5.80799 5.92801 5.93938 6.26363 6.40919 6.77588 7.22009 7.54792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.126 3.874 3 C -0.242 4.242 4 C 0.598 3.402 5 O -0.547 6.547 6 N -0.710 5.710 7 C 0.123 3.877 8 H 0.106 0.894 9 C -0.136 4.136 10 C -0.074 4.074 11 H 0.100 0.900 12 C -0.071 4.071 13 C -0.072 4.072 14 C -0.018 4.018 15 C 0.219 3.781 16 N -0.294 5.294 17 N -0.226 5.226 18 N -0.047 5.047 19 N -0.269 5.269 20 C -0.084 4.084 21 C -0.118 4.118 22 C -0.095 4.095 23 C -0.145 4.145 24 C -0.126 4.126 25 C 0.017 3.983 26 C -0.041 4.041 27 O -0.530 6.530 28 Si 0.664 3.336 29 N -0.544 5.544 30 H 0.080 0.920 31 H 0.068 0.932 32 H 0.104 0.896 33 H 0.401 0.599 34 H 0.077 0.923 35 H 0.098 0.902 36 H 0.135 0.865 37 H 0.477 0.523 38 H 0.132 0.868 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.095 0.905 42 H 0.075 0.925 43 H 0.146 0.854 44 H 0.088 0.912 45 H 0.383 0.617 46 H -0.250 1.250 47 H -0.250 1.250 48 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.916 -1.134 2.748 3.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.007 3.993 3 C -0.251 4.251 4 C 0.387 3.613 5 O -0.426 6.426 6 N -0.361 5.361 7 C 0.018 3.982 8 H 0.124 0.876 9 C -0.174 4.174 10 C -0.092 4.092 11 H 0.118 0.882 12 C -0.072 4.072 13 C -0.092 4.092 14 C -0.021 4.021 15 C -0.061 4.061 16 N -0.145 5.145 17 N -0.072 5.072 18 N -0.042 5.042 19 N -0.142 5.142 20 C -0.104 4.104 21 C -0.136 4.136 22 C -0.114 4.114 23 C -0.183 4.183 24 C -0.150 4.150 25 C -0.091 4.091 26 C -0.152 4.152 27 O -0.338 6.338 28 Si 0.564 3.436 29 N -0.144 5.144 30 H 0.099 0.901 31 H 0.086 0.914 32 H 0.123 0.877 33 H 0.236 0.764 34 H 0.096 0.904 35 H 0.117 0.883 36 H 0.153 0.847 37 H 0.331 0.669 38 H 0.150 0.850 39 H 0.149 0.851 40 H 0.148 0.852 41 H 0.113 0.887 42 H 0.094 0.906 43 H 0.164 0.836 44 H 0.106 0.894 45 H 0.232 0.768 46 H -0.174 1.174 47 H -0.173 1.173 48 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.267 -1.571 2.099 2.636 hybrid contribution 1.790 0.248 -0.872 2.006 sum 2.057 -1.324 1.228 2.737 Atomic orbital electron populations 1.20654 0.86465 1.04636 1.03872 1.20378 0.93757 0.85136 1.00005 1.20060 0.92995 0.91980 1.20099 1.17284 0.85196 0.83946 0.74835 1.90748 1.16571 1.84328 1.50952 1.45425 1.09771 1.04889 1.76017 1.21779 0.99562 0.80221 0.96687 0.87626 1.23436 0.98079 0.99958 0.95931 1.21613 0.97546 0.93145 0.96905 0.88186 1.19615 0.92759 0.95325 0.99455 1.21068 0.96021 0.95318 0.96785 1.17206 0.85655 0.94742 1.04477 1.23737 0.96549 0.84996 1.00839 1.74929 0.93904 1.25364 1.20336 1.47759 1.06416 1.09614 1.43446 1.78951 1.21210 0.90597 1.13424 1.76102 0.95236 1.25908 1.16917 1.21183 0.92608 0.98762 0.97844 1.21095 0.95719 0.97035 0.99774 1.21227 0.99742 0.92368 0.98026 1.23585 0.95723 1.00816 0.98207 1.21751 0.95655 0.92520 1.05106 1.19083 0.83261 0.94348 1.12358 1.23975 0.92637 1.07699 0.90910 1.86610 1.41345 1.62465 1.43362 0.95721 0.85734 0.74385 0.87783 1.41635 1.05375 1.08538 1.58805 0.90096 0.91360 0.87715 0.76435 0.90399 0.88349 0.84719 0.66869 0.85011 0.85065 0.85240 0.88675 0.90610 0.83628 0.89381 0.76817 1.17447 1.17346 0.74729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.01 9.88 36.01 0.36 0.34 16 2 C 0.13 0.19 7.17 -81.88 -0.59 -0.40 16 3 C -0.24 -0.63 6.29 -103.35 -0.65 -1.28 16 4 C 0.60 2.07 7.81 -12.60 -0.10 1.97 16 5 O -0.55 -3.39 14.42 5.25 0.08 -3.32 16 6 N -0.71 -0.50 5.26 -54.14 -0.28 -0.79 16 7 C 0.12 0.00 4.32 -67.12 -0.29 -0.29 16 8 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 9 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 10 C -0.07 0.08 3.86 -90.96 -0.35 -0.27 16 11 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 12 C -0.07 0.00 5.28 -104.67 -0.55 -0.55 16 13 C -0.07 -0.09 9.36 -39.26 -0.37 -0.46 16 14 C -0.02 -0.04 5.88 -104.89 -0.62 -0.65 16 15 C 0.22 0.70 7.94 -156.30 -1.24 -0.54 16 16 N -0.29 -0.59 12.08 32.17 0.39 -0.20 16 17 N -0.23 0.01 7.90 60.35 0.48 0.49 16 18 N -0.05 -0.13 13.47 60.35 0.81 0.69 16 19 N -0.27 -1.11 12.24 32.16 0.39 -0.72 16 20 C -0.08 -0.07 9.70 -39.26 -0.38 -0.45 16 21 C -0.12 0.05 10.03 -39.63 -0.40 -0.34 16 22 C -0.09 0.06 8.60 -39.52 -0.34 -0.28 16 23 C -0.14 0.07 7.25 -25.92 -0.19 -0.11 16 24 C -0.13 -0.17 10.43 -37.50 -0.39 -0.56 16 25 C 0.02 0.01 6.14 -81.87 -0.50 -0.49 16 26 C -0.04 0.05 2.97 36.00 0.11 0.16 16 27 O -0.53 -0.03 12.84 -35.23 -0.45 -0.49 16 28 Si 0.66 -1.58 30.94 -169.99 -5.26 -6.84 16 29 N -0.54 0.09 5.41 -5.42 -0.03 0.06 16 30 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.10 0.20 6.47 -51.93 -0.34 -0.14 16 33 H 0.40 -0.46 7.83 -40.82 -0.32 -0.78 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 36 H 0.13 0.13 7.88 -52.49 -0.41 -0.29 16 37 H 0.48 -2.24 8.96 -340.36 -3.05 -5.29 16 38 H 0.13 0.00 7.88 -52.49 -0.41 -0.41 16 39 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 40 H 0.13 -0.30 6.65 -52.49 -0.35 -0.65 16 41 H 0.09 -0.12 6.30 -51.93 -0.33 -0.45 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 43 H 0.15 -0.04 7.70 -52.49 -0.40 -0.44 16 44 H 0.09 -0.27 7.96 -51.93 -0.41 -0.69 16 45 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 46 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 47 H -0.25 0.06 7.11 56.52 0.40 0.46 16 48 H 0.41 -1.14 6.70 -40.82 -0.27 -1.42 16 LS Contribution 405.96 15.07 6.12 6.12 Total: 0.00 -11.35 405.96 -12.86 -24.22 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -8.42 Total: -15.05 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -6.68 Total: -4.17 kcal Atomic # 7 Polarization: -2.23 SS G_CDS: 1.76 Total: -0.47 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -0.38 Total: -3.80 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.26 Total: -6.84 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -11.35 -12.86 -24.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17907338.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 181.619 kcal (2) G-P(sol) polarization free energy of solvation -11.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 170.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.220 kcal (6) G-S(sol) free energy of system = (1) + (5) 157.399 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds