Wall clock time and date at job start Sat Mar 6 2021 03:31:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36770 * 125.80143 * 2 1 4 4 C 1.47261 * 126.94458 * 359.97438 * 3 2 1 5 5 O 1.21627 * 119.99609 * 359.71972 * 4 3 2 6 6 N 1.34772 * 119.99906 * 179.71250 * 4 3 2 7 7 C 1.46502 * 119.99772 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.85215 * 23.80262 * 7 6 4 9 9 C 1.53777 * 113.61682 * 155.00009 * 7 6 4 10 10 C 1.53782 * 87.08148 * 89.19506 * 9 7 6 11 11 H 1.08998 * 113.61717 * 270.79846 * 10 9 7 12 12 C 1.50700 * 113.61260 * 139.98164 * 10 9 7 13 13 C 1.38007 * 119.94211 * 120.00549 * 12 10 9 14 14 C 1.39319 * 119.88339 * 179.97438 * 13 12 10 15 15 C 1.48459 * 120.11911 * 180.02562 * 14 13 12 16 16 N 1.31817 * 126.67413 * 179.68797 * 15 14 13 17 17 N 1.28875 * 107.81642 * 179.83456 * 16 15 14 18 18 N 1.28729 * 109.31782 * 0.43413 * 17 16 15 19 19 N 1.28989 * 108.94639 * 359.72839 * 18 17 16 20 20 C 1.39285 * 119.76532 * 359.97438 * 14 13 12 21 21 C 1.38052 * 119.88073 * 0.02562 * 20 14 13 22 22 C 1.38288 * 120.11702 * 359.97438 * 21 20 14 23 23 C 1.53778 * 87.08056 * 25.43690 * 10 9 7 24 24 C 1.46687 * 106.11081 * 179.71924 * 3 2 1 25 25 C 1.34486 * 106.33516 * 0.23630 * 24 3 2 26 26 C 1.50698 * 125.56904 * 179.97438 * 25 24 3 27 27 O 1.42896 * 109.47638 * 300.00156 * 26 25 24 28 28 Si 1.86305 * 109.47066 * 180.02562 * 26 25 24 29 29 N 1.34658 * 125.79946 * 180.12333 * 2 1 3 30 30 H 1.08996 * 109.47176 * 90.00435 * 1 2 3 31 31 H 1.08995 * 109.47712 * 210.00723 * 1 2 3 32 32 H 1.09001 * 109.46929 * 330.00720 * 1 2 3 33 33 H 0.96999 * 120.00149 * 0.02562 * 6 4 3 34 34 H 1.09006 * 113.61597 * 334.65162 * 9 7 6 35 35 H 1.08997 * 113.69441 * 203.75552 * 9 7 6 36 36 H 1.08001 * 120.05687 * 359.95020 * 13 12 10 37 37 H 0.97000 * 125.34422 * 180.17045 * 17 16 15 38 38 H 1.08001 * 120.05901 * 179.72516 * 20 14 13 39 39 H 1.08000 * 119.94219 * 179.97438 * 21 20 14 40 40 H 1.07995 * 119.88385 * 179.97438 * 22 21 20 41 41 H 1.09000 * 113.62039 * 89.11108 * 23 10 9 42 42 H 1.09002 * 113.61550 * 220.01737 * 23 10 9 43 43 H 1.08002 * 126.83293 * 180.21599 * 24 3 2 44 44 H 1.09003 * 109.46964 * 60.00391 * 26 25 24 45 45 H 0.96705 * 114.00093 * 179.97438 * 27 26 25 46 46 H 1.48497 * 109.99538 * 60.00113 * 28 26 25 47 47 H 1.48495 * 110.00158 * 181.32290 * 28 26 25 48 48 H 0.97001 * 124.85383 * 0.07061 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0062 6 7 2.7850 3.5053 0.0054 7 6 2.3505 4.9044 0.0054 8 1 1.3453 5.0354 0.4062 9 6 3.3843 5.8706 0.6074 10 6 3.9715 5.9995 -0.8081 11 1 4.7397 5.2591 -1.0313 12 6 4.3911 7.4030 -1.1620 13 6 5.7059 7.6674 -1.4876 14 6 6.0924 8.9652 -1.8152 15 6 7.5053 9.2554 -2.1668 16 7 8.0087 10.4269 -2.5009 17 7 9.2669 10.2651 -2.7282 18 7 9.5746 9.0268 -2.5576 19 7 8.5160 8.3760 -2.2118 20 6 5.1483 9.9893 -1.8126 21 6 3.8358 9.7138 -1.4854 22 6 3.4575 8.4238 -1.1610 23 6 2.5773 5.6219 -1.3357 24 6 3.6882 0.6150 0.0069 25 6 3.6095 -0.7275 0.0051 26 6 4.7818 -1.6743 0.0099 27 8 5.5815 -1.4484 -1.1526 28 14 4.1614 -3.4310 0.0042 29 7 2.2947 -1.0922 -0.0024 30 1 -0.3633 -0.0001 -1.0276 31 1 -0.3634 -0.8898 0.5139 32 1 -0.3633 0.8901 0.5137 33 1 3.7311 3.2913 0.0096 34 1 4.0610 5.3980 1.3194 35 1 2.9505 6.7960 0.9860 36 1 6.4340 6.8697 -1.4881 37 1 9.8844 10.9656 -2.9907 38 1 5.4436 10.9979 -2.0614 39 1 3.1030 10.5072 -1.4826 40 1 2.4298 8.2127 -0.9052 41 1 1.9214 6.4789 -1.4888 42 1 2.6023 4.9484 -2.1924 43 1 4.5890 1.2108 0.0120 44 1 5.3829 -1.5038 0.9031 45 1 6.3560 -2.0241 -1.2153 46 1 3.3407 -3.6758 -1.2089 47 1 5.3074 -4.3746 0.0411 48 1 1.9733 -2.0074 -0.0053 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857610_17907338.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:26 Heat of formation + Delta-G solvation = 155.365758 kcal Electronic energy + Delta-G solvation = -33034.395695 eV Core-core repulsion = 28481.378794 eV Total energy + Delta-G solvation = -4553.016901 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.159 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -45.50542 -42.46066 -41.38092 -40.05940 -38.69480 -37.84883 -35.48198 -34.87179 -34.21479 -32.87169 -32.34759 -31.77534 -31.21658 -28.97544 -26.63381 -26.62021 -25.80962 -25.51435 -25.14442 -23.47664 -23.04987 -22.04023 -21.41227 -20.71240 -20.37488 -19.71595 -18.70059 -18.23527 -18.19034 -17.93044 -17.06889 -16.93600 -16.51727 -16.31633 -16.14293 -15.89526 -15.57446 -15.28023 -15.14241 -14.96249 -14.73450 -14.56437 -14.46860 -14.35552 -14.11302 -14.06173 -13.67107 -13.45928 -13.40460 -13.35621 -13.25584 -12.90816 -12.79716 -12.52358 -12.45519 -12.42988 -12.24687 -12.12469 -12.03695 -11.70511 -11.53887 -11.16476 -10.92131 -10.55096 -10.08515 -9.78114 -9.76363 -9.53832 -9.12142 -5.07564 -0.29463 0.13939 0.40590 0.71596 1.09911 1.29726 1.30080 1.38013 1.46957 1.81200 2.02616 2.40269 2.54547 2.64076 2.78990 3.12747 3.41977 3.54219 3.70622 3.75871 3.80331 3.91129 3.96899 4.05852 4.10688 4.12272 4.22916 4.24963 4.27591 4.38701 4.44660 4.45788 4.54576 4.59586 4.73119 4.74523 4.79362 4.84409 4.89821 4.94211 5.05333 5.06457 5.10110 5.11564 5.22017 5.32339 5.44799 5.48931 5.56750 5.61754 5.71000 5.76332 5.88660 5.95891 6.41332 6.58175 6.68437 7.06799 7.37966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.119 3.881 3 C -0.266 4.266 4 C 0.591 3.409 5 O -0.583 6.583 6 N -0.701 5.701 7 C 0.117 3.883 8 H 0.091 0.909 9 C -0.123 4.123 10 C -0.067 4.067 11 H 0.102 0.898 12 C -0.073 4.073 13 C -0.082 4.082 14 C -0.036 4.036 15 C 0.209 3.791 16 N -0.298 5.298 17 N -0.202 5.202 18 N -0.059 5.059 19 N -0.296 5.296 20 C -0.090 4.090 21 C -0.118 4.118 22 C -0.094 4.094 23 C -0.141 4.141 24 C -0.138 4.138 25 C 0.012 3.988 26 C -0.051 4.051 27 O -0.554 6.554 28 Si 0.751 3.249 29 N -0.536 5.536 30 H 0.080 0.920 31 H 0.094 0.906 32 H 0.085 0.915 33 H 0.410 0.590 34 H 0.083 0.917 35 H 0.108 0.892 36 H 0.130 0.870 37 H 0.494 0.506 38 H 0.136 0.864 39 H 0.153 0.847 40 H 0.149 0.851 41 H 0.105 0.895 42 H 0.061 0.939 43 H 0.157 0.843 44 H 0.111 0.889 45 H 0.399 0.601 46 H -0.294 1.294 47 H -0.276 1.276 48 H 0.425 0.575 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.082 -1.112 3.342 3.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.001 4.001 3 C -0.276 4.276 4 C 0.382 3.618 5 O -0.465 6.465 6 N -0.351 5.351 7 C 0.012 3.988 8 H 0.109 0.891 9 C -0.161 4.161 10 C -0.085 4.085 11 H 0.120 0.880 12 C -0.073 4.073 13 C -0.102 4.102 14 C -0.040 4.040 15 C -0.071 4.071 16 N -0.150 5.150 17 N -0.053 5.053 18 N -0.054 5.054 19 N -0.168 5.168 20 C -0.110 4.110 21 C -0.135 4.135 22 C -0.113 4.113 23 C -0.180 4.180 24 C -0.162 4.162 25 C -0.096 4.096 26 C -0.161 4.161 27 O -0.364 6.364 28 Si 0.655 3.345 29 N -0.136 5.136 30 H 0.098 0.902 31 H 0.113 0.887 32 H 0.104 0.896 33 H 0.246 0.754 34 H 0.102 0.898 35 H 0.126 0.874 36 H 0.148 0.852 37 H 0.353 0.647 38 H 0.154 0.846 39 H 0.171 0.829 40 H 0.166 0.834 41 H 0.123 0.877 42 H 0.080 0.920 43 H 0.174 0.826 44 H 0.129 0.871 45 H 0.250 0.750 46 H -0.221 1.221 47 H -0.201 1.201 48 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 0.498 -1.539 2.705 3.152 hybrid contribution 1.773 0.267 -1.109 2.108 sum 2.271 -1.272 1.597 3.053 Atomic orbital electron populations 1.20623 0.85804 1.04977 1.03899 1.20589 0.94389 0.85433 0.99690 1.20197 0.94032 0.91883 1.21453 1.17535 0.85012 0.84790 0.74486 1.90719 1.17955 1.84907 1.52938 1.45375 1.09941 1.04878 1.74906 1.21835 0.99415 0.80126 0.97458 0.89116 1.23387 0.97293 0.99731 0.95699 1.21564 0.97159 0.92751 0.97076 0.87958 1.19712 0.92406 0.95919 0.99232 1.21116 0.96597 0.95105 0.97397 1.17379 0.85517 0.95459 1.05608 1.24020 0.97028 0.85087 1.00923 1.74896 0.94505 1.25070 1.20548 1.47815 1.06236 1.09490 1.41756 1.78877 1.21095 0.91439 1.14001 1.76072 0.95793 1.26827 1.18140 1.21322 0.93013 0.98709 0.97985 1.21375 0.95583 0.97751 0.98829 1.21491 1.00489 0.92129 0.97187 1.23577 0.96373 1.00770 0.97246 1.21948 0.95509 0.93153 1.05576 1.19449 0.83956 0.94650 1.11527 1.24254 0.92375 1.07972 0.91471 1.86559 1.42378 1.63516 1.43979 0.94718 0.82736 0.71871 0.85220 1.41639 1.05112 1.08863 1.58023 0.90177 0.88710 0.89628 0.75363 0.89838 0.87354 0.85158 0.64730 0.84594 0.82905 0.83358 0.87668 0.92014 0.82572 0.87093 0.74956 1.22091 1.20132 0.73335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.10 9.88 71.24 0.70 0.60 16 2 C 0.12 0.44 7.17 41.78 0.30 0.74 16 3 C -0.27 -1.67 6.29 -19.04 -0.12 -1.79 16 4 C 0.59 5.05 7.81 86.62 0.68 5.72 16 5 O -0.58 -8.49 14.42 -4.12 -0.06 -8.55 16 6 N -0.70 -1.71 5.26 -443.45 -2.33 -4.05 16 7 C 0.12 0.08 4.32 45.52 0.20 0.28 16 8 H 0.09 0.37 7.46 -2.39 -0.02 0.36 16 9 C -0.12 0.43 7.29 31.12 0.23 0.66 16 10 C -0.07 0.15 3.86 -11.01 -0.04 0.11 16 11 H 0.10 -0.28 8.09 -2.39 -0.02 -0.30 16 12 C -0.07 0.01 5.28 -19.89 -0.11 -0.09 16 13 C -0.08 -0.26 9.36 22.48 0.21 -0.05 16 14 C -0.04 -0.18 5.88 -20.04 -0.12 -0.29 16 15 C 0.21 1.52 7.94 137.38 1.09 2.61 16 16 N -0.30 -1.29 12.08 -52.13 -0.63 -1.92 16 17 N -0.20 -0.02 7.90 37.02 0.29 0.28 16 18 N -0.06 -0.36 13.47 37.02 0.50 0.14 16 19 N -0.30 -2.78 12.24 -52.18 -0.64 -3.42 16 20 C -0.09 -0.14 9.70 22.48 0.22 0.08 16 21 C -0.12 0.22 10.03 22.24 0.22 0.44 16 22 C -0.09 0.21 8.60 22.31 0.19 0.40 16 23 C -0.14 0.10 7.25 31.12 0.23 0.32 16 24 C -0.14 -0.42 10.43 23.62 0.25 -0.18 16 25 C 0.01 0.01 6.14 40.98 0.25 0.26 16 26 C -0.05 0.18 2.97 71.24 0.21 0.39 16 27 O -0.55 0.20 12.84 -148.98 -1.91 -1.72 16 28 Si 0.75 -4.06 30.94 68.60 2.12 -1.94 16 29 N -0.54 0.22 5.41 -171.08 -0.93 -0.71 16 30 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 32 H 0.09 0.47 6.47 -2.39 -0.02 0.46 16 33 H 0.41 -0.66 7.83 -92.71 -0.73 -1.38 16 34 H 0.08 -0.35 8.14 -2.38 -0.02 -0.37 16 35 H 0.11 -0.56 7.72 -2.39 -0.02 -0.58 16 36 H 0.13 0.44 7.88 -2.91 -0.02 0.41 16 37 H 0.49 -4.75 8.96 -347.53 -3.12 -7.87 16 38 H 0.14 0.00 7.88 -2.91 -0.02 -0.02 16 39 H 0.15 -1.00 8.06 -2.91 -0.02 -1.02 16 40 H 0.15 -0.93 6.65 -2.91 -0.02 -0.95 16 41 H 0.11 -0.30 6.30 -2.39 -0.02 -0.31 16 42 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 43 H 0.16 -0.05 7.70 -2.91 -0.02 -0.07 16 44 H 0.11 -0.88 7.96 -2.39 -0.02 -0.90 16 45 H 0.40 -3.42 8.74 -74.05 -0.65 -4.07 16 46 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 47 H -0.28 0.29 7.11 99.48 0.71 1.00 16 48 H 0.43 -2.55 6.70 -92.71 -0.62 -3.17 16 Total: 0.00 -27.57 405.96 -2.99 -30.56 By element: Atomic # 1 Polarization: -14.89 SS G_CDS: -3.99 Total: -18.88 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 4.59 Total: 10.21 kcal Atomic # 7 Polarization: -5.94 SS G_CDS: -3.74 Total: -9.68 kcal Atomic # 8 Polarization: -8.30 SS G_CDS: -1.97 Total: -10.27 kcal Atomic # 14 Polarization: -4.06 SS G_CDS: 2.12 Total: -1.94 kcal Total: -27.57 -2.99 -30.56 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17907338.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.926 kcal (2) G-P(sol) polarization free energy of solvation -27.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 158.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.988 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.560 kcal (6) G-S(sol) free energy of system = (1) + (5) 155.366 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds