Wall clock time and date at job start Sat Mar 6 2021 03:31:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38970 * 119.95580 * 2 1 4 4 O 1.35712 * 119.91422 * 359.97438 * 3 2 1 5 5 C 1.39016 * 120.17547 * 179.97438 * 3 2 1 6 6 C 1.50703 * 119.95783 * 180.02562 * 5 3 2 7 7 O 1.42894 * 109.47495 * 74.99379 * 6 5 3 8 8 Si 1.86298 * 109.47203 * 195.00086 * 6 5 3 9 9 C 1.37685 * 120.09083 * 359.73822 * 5 3 2 10 10 C 1.39751 * 119.90573 * 0.49398 * 9 5 3 11 11 C 1.47609 * 120.08790 * 179.78354 * 10 9 5 12 12 O 1.21587 * 119.99859 * 359.72872 * 11 10 9 13 13 N 1.34776 * 119.99939 * 179.72059 * 11 10 9 14 14 C 1.46505 * 119.99677 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.84844 * 336.19389 * 14 13 11 16 16 C 1.53954 * 113.61324 * 107.46666 * 14 13 11 17 17 C 1.53781 * 87.01637 * 89.19843 * 16 14 13 18 18 H 1.08996 * 113.61621 * 270.76939 * 17 16 14 19 19 C 1.50700 * 113.61206 * 139.95066 * 17 16 14 20 20 C 1.38007 * 119.94211 * 140.86430 * 19 17 16 21 21 C 1.39319 * 119.88339 * 179.97438 * 20 19 17 22 22 C 1.48459 * 120.11911 * 180.02562 * 21 20 19 23 23 N 1.31817 * 126.67413 * 179.68797 * 22 21 20 24 24 N 1.28875 * 107.81642 * 179.83456 * 23 22 21 25 25 N 1.28729 * 109.31782 * 0.43413 * 24 23 22 26 26 N 1.28989 * 108.94639 * 359.72839 * 25 24 23 27 27 C 1.39285 * 119.76532 * 359.97438 * 21 20 19 28 28 C 1.38052 * 119.88073 * 0.02562 * 27 21 20 29 29 C 1.38288 * 120.11702 * 359.97438 * 28 27 21 30 30 C 1.53775 * 87.17579 * 25.36028 * 17 16 14 31 31 C 1.37719 * 119.95370 * 179.97438 * 2 1 3 32 32 H 1.09001 * 109.47393 * 270.02571 * 1 2 3 33 33 H 1.08996 * 109.47155 * 30.02377 * 1 2 3 34 34 H 1.08997 * 109.47076 * 150.02176 * 1 2 3 35 35 H 0.96702 * 113.99876 * 89.99979 * 4 3 2 36 36 H 1.09009 * 109.46909 * 314.99731 * 6 5 3 37 37 H 0.96706 * 113.99621 * 60.00266 * 7 6 5 38 38 H 1.48499 * 110.00324 * 58.67543 * 8 6 5 39 39 H 1.48502 * 110.00062 * 179.97438 * 8 6 5 40 40 H 1.08004 * 120.04714 * 180.25053 * 9 5 3 41 41 H 0.96996 * 120.00578 * 0.02562 * 13 11 10 42 42 H 1.08998 * 113.66895 * 334.66854 * 16 14 13 43 43 H 1.09003 * 113.61040 * 203.71584 * 16 14 13 44 44 H 1.08000 * 120.05722 * 359.97438 * 20 19 17 45 45 H 0.97000 * 125.34422 * 180.17045 * 24 23 22 46 46 H 1.08001 * 120.05901 * 179.72516 * 27 21 20 47 47 H 1.08000 * 119.94219 * 179.97438 * 28 27 21 48 48 H 1.07995 * 119.88385 * 179.97438 * 29 28 27 49 49 H 1.08999 * 113.61592 * 89.15704 * 30 17 16 50 50 H 1.08997 * 113.61719 * 220.05807 * 30 17 16 51 51 H 1.08006 * 120.04799 * 359.97321 * 31 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5179 0.0011 7 8 4.2715 3.1043 1.3025 8 14 6.1199 2.2157 -0.4529 9 6 4.2859 0.0208 0.0065 10 6 3.5918 -1.1922 0.0016 11 6 4.3327 -2.4688 0.0032 12 8 5.5486 -2.4660 0.0037 13 7 3.6615 -3.6375 0.0041 14 6 4.3969 -4.9046 0.0062 15 1 5.4045 -4.8098 -0.3986 16 6 4.3393 -5.6488 1.3527 17 6 3.0637 -6.3303 0.8299 18 1 2.1507 -5.7788 1.0544 19 6 2.9687 -7.7906 1.1897 20 6 1.7526 -8.3330 1.5524 21 6 1.6661 -9.6833 1.8842 22 6 0.3604 -10.2723 2.2745 23 7 0.1304 -11.5273 2.6059 24 7 -1.1237 -11.6390 2.8809 25 7 -1.6971 -10.4970 2.7256 26 7 -0.8150 -9.6327 2.3530 27 6 2.8087 -10.4790 1.8475 28 6 4.0202 -9.9263 1.4833 29 6 4.1005 -8.5854 1.1549 30 6 3.6021 -6.0791 -0.5884 31 6 2.1946 -1.1932 0.0005 32 1 -0.3634 0.0005 1.0277 33 1 -0.3633 0.8897 -0.5142 34 1 -0.3633 -0.8902 -0.5135 35 1 1.3219 2.7182 0.8827 36 1 3.8881 3.1941 -0.7257 37 1 4.6550 2.5564 2.0010 38 1 6.2018 1.5769 -1.7909 39 1 6.8679 3.4986 -0.4565 40 1 5.3659 0.0257 0.0110 41 1 2.6915 -3.6398 0.0034 42 1 4.1661 -4.9947 2.2072 43 1 5.1702 -6.3373 1.5069 44 1 0.8695 -7.7118 1.5789 45 1 -1.5668 -12.4563 3.1576 46 1 2.7479 -11.5253 2.1081 47 1 4.9069 -10.5423 1.4549 48 1 5.0502 -8.1569 0.8709 49 1 4.2311 -6.8853 -0.9658 50 1 2.8346 -5.7718 -1.2988 51 1 1.6546 -2.1286 0.0014 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17915012.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:31:43 Heat of formation + Delta-G solvation = 96.275136 kcal Electronic energy + Delta-G solvation = -36778.405770 eV Core-core repulsion = 31841.344085 eV Total energy + Delta-G solvation = -4937.061685 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.163 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -45.42318 -41.91361 -41.29875 -40.23566 -38.92938 -37.84741 -37.47303 -35.42484 -34.93965 -34.31999 -33.98203 -32.32324 -31.71409 -31.16466 -28.10290 -27.01078 -26.83199 -26.50807 -25.66700 -25.46149 -24.58072 -23.11391 -22.34561 -21.98436 -21.59254 -20.45821 -19.88250 -19.55041 -18.85549 -18.14292 -18.10670 -17.94450 -17.34184 -16.84734 -16.68036 -16.44464 -16.34750 -16.09131 -15.97282 -15.72791 -15.45029 -15.23415 -15.01452 -14.77633 -14.60520 -14.51531 -14.43634 -14.27596 -14.11760 -13.89907 -13.62087 -13.43723 -13.36904 -13.34558 -13.04999 -12.92593 -12.80621 -12.54936 -12.35674 -12.32133 -12.16705 -12.06109 -11.99288 -11.84366 -11.65983 -11.65102 -11.32681 -10.99154 -10.45963 -10.17734 -10.01343 -9.83829 -9.68774 -9.60691 -4.97402 -0.41080 -0.29866 0.03918 0.21459 0.31912 1.27060 1.27907 1.35467 1.62050 1.71074 1.97184 2.00958 2.55169 2.66829 2.71518 3.06531 3.18348 3.33566 3.36721 3.49413 3.50927 3.59395 3.63390 3.67729 3.81371 3.89844 3.92156 4.03651 4.09451 4.15032 4.19547 4.27258 4.37191 4.42106 4.44750 4.51845 4.52752 4.58335 4.60092 4.62909 4.63974 4.75881 4.77762 4.89226 4.92649 4.97431 4.98902 5.01565 5.06992 5.07546 5.25127 5.33457 5.40042 5.43500 5.43830 5.51071 5.58770 5.84651 6.38294 6.50044 6.55802 7.13109 7.16535 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.489 6.489 5 C -0.152 4.152 6 C -0.059 4.059 7 O -0.538 6.538 8 Si 0.679 3.321 9 C -0.044 4.044 10 C -0.139 4.139 11 C 0.565 3.435 12 O -0.529 6.529 13 N -0.709 5.709 14 C 0.119 3.881 15 H 0.109 0.891 16 C -0.143 4.143 17 C -0.074 4.074 18 H 0.100 0.900 19 C -0.073 4.073 20 C -0.072 4.072 21 C -0.016 4.016 22 C 0.217 3.783 23 N -0.293 5.293 24 N -0.226 5.226 25 N -0.046 5.046 26 N -0.269 5.269 27 C -0.083 4.083 28 C -0.118 4.118 29 C -0.095 4.095 30 C -0.136 4.136 31 C -0.065 4.065 32 H 0.074 0.926 33 H 0.077 0.923 34 H 0.071 0.929 35 H 0.400 0.600 36 H 0.119 0.881 37 H 0.378 0.622 38 H -0.255 1.255 39 H -0.250 1.250 40 H 0.146 0.854 41 H 0.401 0.599 42 H 0.077 0.923 43 H 0.097 0.903 44 H 0.135 0.865 45 H 0.477 0.523 46 H 0.132 0.868 47 H 0.132 0.868 48 H 0.130 0.870 49 H 0.100 0.900 50 H 0.078 0.922 51 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.707 -4.624 2.639 5.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.118 4.118 3 C 0.116 3.884 4 O -0.301 6.301 5 C -0.153 4.153 6 C -0.170 4.170 7 O -0.343 6.343 8 Si 0.580 3.420 9 C -0.063 4.063 10 C -0.142 4.142 11 C 0.352 3.648 12 O -0.406 6.406 13 N -0.361 5.361 14 C 0.014 3.986 15 H 0.127 0.873 16 C -0.181 4.181 17 C -0.092 4.092 18 H 0.118 0.882 19 C -0.073 4.073 20 C -0.092 4.092 21 C -0.020 4.020 22 C -0.063 4.063 23 N -0.145 5.145 24 N -0.072 5.072 25 N -0.041 5.041 26 N -0.142 5.142 27 C -0.103 4.103 28 C -0.136 4.136 29 C -0.114 4.114 30 C -0.174 4.174 31 C -0.084 4.084 32 H 0.092 0.908 33 H 0.096 0.904 34 H 0.090 0.910 35 H 0.258 0.742 36 H 0.137 0.863 37 H 0.226 0.774 38 H -0.179 1.179 39 H -0.175 1.175 40 H 0.163 0.837 41 H 0.237 0.763 42 H 0.095 0.905 43 H 0.116 0.884 44 H 0.153 0.847 45 H 0.332 0.668 46 H 0.150 0.850 47 H 0.150 0.850 48 H 0.147 0.853 49 H 0.119 0.881 50 H 0.097 0.903 51 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.110 -4.012 1.244 4.345 hybrid contribution -1.172 -0.607 0.449 1.394 sum -2.282 -4.619 1.693 5.423 Atomic orbital electron populations 1.20741 0.89694 1.03839 1.02889 1.20217 0.97346 0.92082 1.02153 1.18315 0.88806 0.85312 0.95995 1.84659 1.75643 1.35707 1.34081 1.20653 0.93916 0.95984 1.04705 1.24940 1.09683 0.93166 0.89189 1.86515 1.84537 1.47136 1.16160 0.94833 0.76906 0.83714 0.86584 1.20951 0.99999 0.90138 0.95165 1.19798 0.93451 0.93374 1.07624 1.18116 0.87237 0.83474 0.75930 1.90813 1.13212 1.87430 1.49109 1.45572 1.10126 1.04968 1.75431 1.21914 0.97351 0.82208 0.97138 0.87349 1.23607 0.97533 0.99170 0.97834 1.21611 0.99179 0.91652 0.96737 0.88219 1.19579 0.92766 0.95337 0.99646 1.21057 0.98070 0.93295 0.96758 1.17203 0.87008 0.93643 1.04115 1.23733 0.95198 0.86296 1.01027 1.74931 0.98832 1.20871 1.19823 1.47764 1.04034 1.12500 1.42887 1.78953 1.22256 0.89480 1.13444 1.76094 0.97748 1.23700 1.16632 1.21199 0.91384 1.00060 0.97664 1.21102 0.97556 0.95297 0.99613 1.21215 0.98423 0.93622 0.98097 1.23447 1.00130 0.97805 0.96028 1.21106 0.92576 0.97831 0.96896 0.90760 0.90428 0.91016 0.74188 0.86325 0.77446 1.17894 1.17462 0.83728 0.76341 0.90465 0.88449 0.84726 0.66829 0.84963 0.85023 0.85260 0.88118 0.90338 0.84988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.25 9.78 36.00 0.35 0.60 16 2 C -0.12 0.08 5.89 -104.54 -0.62 -0.54 16 3 C 0.16 0.07 6.66 -39.02 -0.26 -0.19 16 4 O -0.49 -0.09 11.84 -18.84 -0.22 -0.31 16 5 C -0.15 -0.08 5.27 -104.53 -0.55 -0.63 16 6 C -0.06 -0.02 2.37 36.01 0.09 0.06 16 7 O -0.54 0.08 12.88 -35.23 -0.45 -0.37 16 8 Si 0.68 0.22 29.92 -169.99 -5.09 -4.86 16 9 C -0.04 -0.03 8.20 -39.22 -0.32 -0.35 16 10 C -0.14 -0.05 5.88 -104.96 -0.62 -0.66 16 11 C 0.56 0.71 7.76 -12.44 -0.10 0.61 16 12 O -0.53 -2.45 15.94 5.29 0.08 -2.36 16 13 N -0.71 1.13 5.21 -53.94 -0.28 0.85 16 14 C 0.12 -0.21 4.33 -67.03 -0.29 -0.50 16 15 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 16 C -0.14 0.33 7.27 -25.83 -0.19 0.15 16 17 C -0.07 0.21 3.85 -90.96 -0.35 -0.14 16 18 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 19 C -0.07 0.10 5.29 -104.67 -0.55 -0.46 16 20 C -0.07 0.00 9.36 -39.26 -0.37 -0.37 16 21 C -0.02 -0.02 5.88 -104.89 -0.62 -0.63 16 22 C 0.22 0.51 7.94 -156.30 -1.24 -0.73 16 23 N -0.29 -0.38 12.08 32.17 0.39 0.01 16 24 N -0.23 0.16 7.90 60.35 0.48 0.64 16 25 N -0.05 -0.09 13.47 60.35 0.81 0.72 16 26 N -0.27 -0.88 12.24 32.16 0.39 -0.48 16 27 C -0.08 0.01 9.70 -39.26 -0.38 -0.37 16 28 C -0.12 0.16 10.03 -39.63 -0.40 -0.24 16 29 C -0.09 0.17 8.53 -39.52 -0.34 -0.17 16 30 C -0.14 0.42 7.29 -25.92 -0.19 0.23 16 31 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 32 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.08 -0.10 7.52 -51.93 -0.39 -0.49 16 34 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 35 H 0.40 -1.32 9.06 45.56 0.41 -0.91 16 36 H 0.12 0.18 7.82 -51.92 -0.41 -0.23 16 37 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 38 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 39 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 40 H 0.15 0.03 4.71 -52.48 -0.25 -0.22 16 41 H 0.40 -1.59 6.73 -40.82 -0.27 -1.86 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.10 -0.27 6.39 -51.93 -0.33 -0.61 16 44 H 0.13 -0.05 7.88 -52.49 -0.41 -0.46 16 45 H 0.48 -2.53 8.96 -340.36 -3.05 -5.58 16 46 H 0.13 -0.10 7.88 -52.49 -0.41 -0.51 16 47 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 48 H 0.13 -0.45 6.71 -52.49 -0.35 -0.80 16 49 H 0.10 -0.34 7.63 -51.93 -0.40 -0.73 16 50 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 51 H 0.13 -0.55 6.39 -52.48 -0.34 -0.89 16 LS Contribution 428.63 15.07 6.46 6.46 Total: 0.00 -11.38 428.63 -12.64 -24.02 By element: Atomic # 1 Polarization: -11.80 SS G_CDS: -7.92 Total: -19.71 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -7.29 Total: -4.59 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: 1.79 Total: 1.73 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.59 Total: -3.04 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.09 Total: -4.86 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -11.38 -12.64 -24.02 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17915012.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.297 kcal (2) G-P(sol) polarization free energy of solvation -11.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.022 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.275 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds