Wall clock time and date at job start Sat Mar 6 2021 03:32:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.46670 * 2 1 4 4 C 1.50698 * 109.47255 * 119.99969 * 2 1 3 5 5 C 1.32696 * 124.68746 * 65.02557 * 4 2 1 6 6 C 1.44500 * 113.10070 * 179.74757 * 5 4 2 7 7 C 1.47042 * 123.49301 * 180.28390 * 6 5 4 8 8 O 1.21663 * 119.99990 * 180.22805 * 7 6 5 9 9 N 1.34771 * 120.00159 * 0.23135 * 7 6 5 10 10 C 1.46500 * 120.00196 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84875 * 23.80518 * 10 9 7 12 12 C 1.53787 * 113.61642 * 154.99829 * 10 9 7 13 13 C 1.53779 * 87.08152 * 89.11404 * 12 10 9 14 14 H 1.09001 * 113.61615 * 270.88503 * 13 12 10 15 15 C 1.50696 * 113.61314 * 140.06518 * 13 12 10 16 16 C 1.38004 * 119.94248 * 120.00246 * 15 13 12 17 17 C 1.39323 * 119.88403 * 180.02562 * 16 15 13 18 18 C 1.48469 * 120.11698 * 179.97438 * 17 16 15 19 19 N 1.31803 * 126.67238 * 179.97438 * 18 17 16 20 20 N 1.28871 * 107.82033 * 179.97438 * 19 18 17 21 21 N 1.28739 * 109.31647 * 359.97438 * 20 19 18 22 22 N 1.28989 * 108.93989 * 359.74631 * 21 20 19 23 23 C 1.39277 * 119.76231 * 359.97438 * 17 16 15 24 24 C 1.38047 * 119.88566 * 0.02562 * 23 17 16 25 25 C 1.38296 * 120.11257 * 359.72441 * 24 23 17 26 26 C 1.53776 * 87.07870 * 25.43635 * 13 12 10 27 27 C 1.36227 * 113.01814 * 0.46839 * 6 5 4 28 28 Cl 1.73599 * 124.61007 * 179.81497 * 27 6 5 29 29 S 1.70447 * 110.78586 * 359.54727 * 27 6 5 30 30 H 0.96696 * 113.99990 * 299.99224 * 1 2 3 31 31 H 1.09002 * 109.47050 * 240.00188 * 2 1 3 32 32 H 1.48497 * 110.00140 * 299.99877 * 3 2 1 33 33 H 1.48501 * 110.00098 * 61.32091 * 3 2 1 34 34 H 1.08004 * 123.44552 * 0.02562 * 5 4 2 35 35 H 0.97002 * 119.99742 * 359.97438 * 9 7 6 36 36 H 1.08995 * 113.61646 * 203.67113 * 12 10 9 37 37 H 1.09008 * 113.61259 * 334.56774 * 12 10 9 38 38 H 1.08003 * 120.05494 * 359.97438 * 16 15 13 39 39 H 0.96998 * 125.34659 * 180.02562 * 20 19 18 40 40 H 1.08005 * 120.05692 * 179.97438 * 23 17 16 41 41 H 1.08000 * 119.94042 * 179.97438 * 24 23 17 42 42 H 1.07998 * 119.87706 * 180.29906 * 25 24 23 43 43 H 1.09010 * 113.61310 * 220.01740 * 26 13 12 44 44 H 1.09001 * 113.61834 * 89.11401 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7488 -1.9997 1.4855 6 6 2.3412 -2.4200 2.7347 7 6 2.2812 -3.8006 3.2373 8 8 2.7992 -4.0837 4.3011 9 7 1.6524 -4.7523 2.5196 10 6 1.5921 -6.1276 3.0206 11 1 1.7008 -6.1887 4.1035 12 6 0.3992 -6.9303 2.4750 13 6 1.3103 -7.3396 1.3058 14 1 1.2782 -6.6477 0.4642 15 6 1.1460 -8.7780 0.8874 16 6 0.7494 -9.0801 -0.3995 17 6 0.5973 -10.4103 -0.7848 18 6 0.1703 -10.7411 -2.1677 19 7 -0.0126 -11.9467 -2.6679 20 7 -0.3811 -11.8127 -3.8956 21 7 -0.4378 -10.5604 -4.1888 22 7 -0.1107 -9.8715 -3.1485 23 6 0.8474 -11.4286 0.1319 24 6 1.2437 -11.1154 1.4167 25 6 1.3980 -9.7935 1.7924 26 6 2.4989 -7.1035 2.2524 27 6 2.9577 -1.4039 3.4004 28 17 3.7617 -1.5717 4.9298 29 16 2.8387 0.0533 2.5241 30 1 -0.3933 0.4416 0.7651 31 1 1.7924 -0.5138 -0.8900 32 1 1.5614 2.4679 -1.2085 33 1 1.5878 2.4586 1.2243 34 1 1.2161 -2.6676 0.8247 35 1 1.2391 -4.5265 1.6715 36 1 0.1057 -7.7642 3.1126 37 1 -0.4444 -6.3088 2.1743 38 1 0.5564 -8.2866 -1.1063 39 1 -0.5845 -12.5409 -4.5031 40 1 0.7306 -12.4614 -0.1616 41 1 1.4374 -11.9043 2.1284 42 1 1.7129 -9.5530 2.7971 43 1 3.3507 -6.6218 1.7720 44 1 2.7796 -7.9848 2.8292 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17970274.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:32:15 Heat of formation + Delta-G solvation = 146.197042 kcal Electronic energy + Delta-G solvation = -32944.318725 eV Core-core repulsion = 28212.994082 eV Total energy + Delta-G solvation = -4731.324643 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.065 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -45.40375 -41.67595 -40.58809 -39.32530 -38.68893 -37.85511 -37.03261 -35.39371 -34.82176 -34.13722 -32.10941 -31.70781 -31.33512 -27.17377 -26.79576 -26.77945 -25.87131 -25.44692 -24.94731 -23.08991 -22.38219 -22.09871 -20.86735 -20.41353 -19.82705 -19.45514 -18.22197 -18.08701 -18.02330 -17.70354 -16.98845 -16.60957 -16.55623 -16.34284 -16.03412 -15.85459 -15.69656 -15.47771 -15.08373 -14.82384 -14.65411 -14.54056 -14.40912 -14.24084 -14.20770 -13.98689 -13.56163 -13.35006 -13.30293 -13.04270 -12.87021 -12.59332 -12.52099 -12.47046 -12.33510 -12.14491 -12.03768 -12.00198 -11.88048 -11.79653 -11.62152 -11.28961 -10.98054 -10.70832 -10.11423 -9.90765 -9.81177 -9.71032 -9.58267 -5.20440 -0.60472 -0.27544 -0.20817 0.23511 0.34514 0.42660 0.68238 1.03594 1.09189 1.28916 1.37779 1.40056 1.77604 2.12664 2.26145 2.68964 2.74133 3.08582 3.20591 3.34510 3.38883 3.62765 3.67686 3.79492 3.85480 3.86194 3.93861 4.06171 4.12539 4.22147 4.27759 4.35812 4.39743 4.44621 4.55185 4.62742 4.66264 4.67339 4.80316 4.81341 4.89195 4.92634 4.97269 5.02500 5.08890 5.35697 5.42636 5.45966 5.50000 5.62446 5.87245 6.15679 6.44623 7.18566 7.20849 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.031 4.031 3 Si 0.645 3.355 4 C -0.233 4.233 5 C -0.070 4.070 6 C -0.160 4.160 7 C 0.579 3.421 8 O -0.516 6.516 9 N -0.707 5.707 10 C 0.121 3.879 11 H 0.108 0.892 12 C -0.136 4.136 13 C -0.073 4.073 14 H 0.100 0.900 15 C -0.073 4.073 16 C -0.071 4.071 17 C -0.017 4.017 18 C 0.218 3.782 19 N -0.293 5.293 20 N -0.226 5.226 21 N -0.046 5.046 22 N -0.269 5.269 23 C -0.083 4.083 24 C -0.118 4.118 25 C -0.095 4.095 26 C -0.143 4.143 27 C -0.114 4.114 28 Cl 0.027 6.973 29 S 0.238 5.762 30 H 0.379 0.621 31 H 0.132 0.868 32 H -0.230 1.230 33 H -0.236 1.236 34 H 0.157 0.843 35 H 0.401 0.599 36 H 0.100 0.900 37 H 0.078 0.922 38 H 0.135 0.865 39 H 0.477 0.523 40 H 0.132 0.868 41 H 0.132 0.868 42 H 0.130 0.870 43 H 0.076 0.924 44 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.004 -0.539 -2.281 2.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.144 4.144 3 Si 0.543 3.457 4 C -0.351 4.351 5 C -0.099 4.099 6 C -0.178 4.178 7 C 0.364 3.636 8 O -0.392 6.392 9 N -0.359 5.359 10 C 0.016 3.984 11 H 0.126 0.874 12 C -0.174 4.174 13 C -0.092 4.092 14 H 0.118 0.882 15 C -0.073 4.073 16 C -0.092 4.092 17 C -0.020 4.020 18 C -0.062 4.062 19 N -0.145 5.145 20 N -0.072 5.072 21 N -0.041 5.041 22 N -0.142 5.142 23 C -0.103 4.103 24 C -0.136 4.136 25 C -0.114 4.114 26 C -0.182 4.182 27 C -0.261 4.261 28 Cl 0.056 6.944 29 S 0.502 5.498 30 H 0.227 0.773 31 H 0.150 0.850 32 H -0.153 1.153 33 H -0.160 1.160 34 H 0.175 0.825 35 H 0.236 0.764 36 H 0.118 0.882 37 H 0.097 0.903 38 H 0.153 0.847 39 H 0.332 0.668 40 H 0.150 0.850 41 H 0.150 0.850 42 H 0.147 0.853 43 H 0.095 0.905 44 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.643 1.395 -2.289 2.757 hybrid contribution -1.655 -2.346 -0.112 2.873 sum -1.013 -0.951 -2.401 2.774 Atomic orbital electron populations 1.86647 1.16914 1.79896 1.49331 1.24396 0.84011 1.10119 0.95861 0.95207 0.91825 0.75075 0.83578 1.24747 1.08911 0.98674 1.02725 1.21012 0.98979 0.95037 0.94897 1.20213 1.06043 0.94686 0.96872 1.17381 0.78438 0.83611 0.84122 1.90884 1.44964 1.81835 1.21511 1.45484 1.57567 1.08277 1.24549 1.21849 0.96539 0.80124 0.99898 0.87427 1.23445 0.96747 1.00119 0.97054 1.21609 0.97421 0.92702 0.97430 0.88183 1.19578 0.99495 0.95075 0.93128 1.21061 0.97126 0.95004 0.95972 1.17206 1.04009 0.94240 0.86557 1.23726 1.01170 0.84478 0.96814 1.74922 1.19339 1.25067 0.95168 1.47763 1.42467 1.08674 1.08304 1.78957 1.14966 0.89469 1.20732 1.76096 1.15785 1.26113 0.96179 1.21192 0.97258 0.99025 0.92850 1.21101 0.99859 0.96723 0.95903 1.21223 0.98101 0.92317 0.99731 1.23581 0.97078 0.99796 0.97741 1.25540 1.03833 1.00506 0.96245 1.98443 1.75782 1.97291 1.22868 1.83417 1.50401 1.06150 1.09782 0.77270 0.85028 1.15264 1.15968 0.82520 0.76394 0.88177 0.90344 0.84707 0.66845 0.84972 0.85036 0.85263 0.90507 0.88499 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.59 12.88 -35.23 -0.45 0.14 16 2 C -0.03 0.08 2.94 36.00 0.11 0.18 16 3 Si 0.64 -1.60 30.92 -169.99 -5.26 -6.86 16 4 C -0.23 0.41 5.65 -36.20 -0.20 0.20 16 5 C -0.07 0.10 9.75 -39.00 -0.38 -0.28 16 6 C -0.16 -0.16 5.98 -104.59 -0.63 -0.79 16 7 C 0.58 1.29 7.79 -12.69 -0.10 1.19 16 8 O -0.52 -2.90 14.51 5.22 0.08 -2.82 16 9 N -0.71 0.56 5.24 -54.21 -0.28 0.28 16 10 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 11 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 12 C -0.14 0.34 7.29 -25.92 -0.19 0.15 16 13 C -0.07 0.16 3.85 -90.96 -0.35 -0.19 16 14 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 15 C -0.07 0.06 5.28 -104.67 -0.55 -0.50 16 16 C -0.07 -0.04 9.36 -39.26 -0.37 -0.41 16 17 C -0.02 -0.03 5.88 -104.89 -0.62 -0.64 16 18 C 0.22 0.59 7.94 -156.31 -1.24 -0.65 16 19 N -0.29 -0.48 12.08 32.17 0.39 -0.09 16 20 N -0.23 0.09 7.90 60.35 0.48 0.56 16 21 N -0.05 -0.11 13.47 60.35 0.81 0.71 16 22 N -0.27 -0.99 12.24 32.16 0.39 -0.59 16 23 C -0.08 -0.03 9.70 -39.27 -0.38 -0.41 16 24 C -0.12 0.11 10.03 -39.63 -0.40 -0.29 16 25 C -0.10 0.12 8.62 -39.52 -0.34 -0.22 16 26 C -0.14 0.23 7.25 -25.92 -0.19 0.04 16 27 C -0.11 -0.17 6.87 30.01 0.21 0.04 16 28 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 29 S 0.24 -0.25 20.19 -107.50 -2.17 -2.42 16 30 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 31 H 0.13 -0.47 7.96 -51.93 -0.41 -0.88 16 32 H -0.23 -0.09 7.11 56.52 0.40 0.31 16 33 H -0.24 0.20 7.11 56.52 0.40 0.60 16 34 H 0.16 -0.54 7.10 -52.48 -0.37 -0.91 16 35 H 0.40 -1.25 7.24 -40.82 -0.30 -1.55 16 36 H 0.10 -0.27 7.73 -51.93 -0.40 -0.68 16 37 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 38 H 0.14 0.03 7.88 -52.48 -0.41 -0.39 16 39 H 0.48 -2.38 8.96 -340.36 -3.05 -5.43 16 40 H 0.13 -0.05 7.88 -52.48 -0.41 -0.47 16 41 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 42 H 0.13 -0.38 6.64 -52.49 -0.35 -0.72 16 43 H 0.08 -0.05 8.14 -51.92 -0.42 -0.47 16 44 H 0.10 -0.21 6.30 -51.93 -0.33 -0.53 16 LS Contribution 405.64 15.07 6.11 6.11 Total: 0.00 -9.76 405.64 -14.14 -23.90 By element: Atomic # 1 Polarization: -7.69 SS G_CDS: -6.91 Total: -14.60 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -5.91 Total: -2.98 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: 1.79 Total: 0.86 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -0.38 Total: -2.68 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.26 Total: -6.86 kcal Atomic # 16 Polarization: -0.25 SS G_CDS: -2.17 Total: -2.42 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -9.76 -14.14 -23.90 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17970274.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.100 kcal (2) G-P(sol) polarization free energy of solvation -9.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 160.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.903 kcal (6) G-S(sol) free energy of system = (1) + (5) 146.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds