Wall clock time and date at job start Sat Mar 6 2021 03:32:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.46670 * 2 1 4 4 C 1.50698 * 109.47255 * 119.99969 * 2 1 3 5 5 C 1.32696 * 124.68746 * 65.02557 * 4 2 1 6 6 C 1.44500 * 113.10070 * 179.74757 * 5 4 2 7 7 C 1.47042 * 123.49301 * 180.28390 * 6 5 4 8 8 O 1.21663 * 119.99990 * 180.22805 * 7 6 5 9 9 N 1.34771 * 120.00159 * 0.23135 * 7 6 5 10 10 C 1.46500 * 120.00196 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84875 * 23.80518 * 10 9 7 12 12 C 1.53787 * 113.61642 * 154.99829 * 10 9 7 13 13 C 1.53779 * 87.08152 * 89.11404 * 12 10 9 14 14 H 1.09001 * 113.61615 * 270.88503 * 13 12 10 15 15 C 1.50696 * 113.61314 * 140.06518 * 13 12 10 16 16 C 1.38004 * 119.94248 * 120.00246 * 15 13 12 17 17 C 1.39323 * 119.88403 * 180.02562 * 16 15 13 18 18 C 1.48469 * 120.11698 * 179.97438 * 17 16 15 19 19 N 1.31803 * 126.67238 * 179.97438 * 18 17 16 20 20 N 1.28871 * 107.82033 * 179.97438 * 19 18 17 21 21 N 1.28739 * 109.31647 * 359.97438 * 20 19 18 22 22 N 1.28989 * 108.93989 * 359.74631 * 21 20 19 23 23 C 1.39277 * 119.76231 * 359.97438 * 17 16 15 24 24 C 1.38047 * 119.88566 * 0.02562 * 23 17 16 25 25 C 1.38296 * 120.11257 * 359.72441 * 24 23 17 26 26 C 1.53776 * 87.07870 * 25.43635 * 13 12 10 27 27 C 1.36227 * 113.01814 * 0.46839 * 6 5 4 28 28 Cl 1.73599 * 124.61007 * 179.81497 * 27 6 5 29 29 S 1.70447 * 110.78586 * 359.54727 * 27 6 5 30 30 H 0.96696 * 113.99990 * 299.99224 * 1 2 3 31 31 H 1.09002 * 109.47050 * 240.00188 * 2 1 3 32 32 H 1.48497 * 110.00140 * 299.99877 * 3 2 1 33 33 H 1.48501 * 110.00098 * 61.32091 * 3 2 1 34 34 H 1.08004 * 123.44552 * 0.02562 * 5 4 2 35 35 H 0.97002 * 119.99742 * 359.97438 * 9 7 6 36 36 H 1.08995 * 113.61646 * 203.67113 * 12 10 9 37 37 H 1.09008 * 113.61259 * 334.56774 * 12 10 9 38 38 H 1.08003 * 120.05494 * 359.97438 * 16 15 13 39 39 H 0.96998 * 125.34659 * 180.02562 * 20 19 18 40 40 H 1.08005 * 120.05692 * 179.97438 * 23 17 16 41 41 H 1.08000 * 119.94042 * 179.97438 * 24 23 17 42 42 H 1.07998 * 119.87706 * 180.29906 * 25 24 23 43 43 H 1.09010 * 113.61310 * 220.01740 * 26 13 12 44 44 H 1.09001 * 113.61834 * 89.11401 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7488 -1.9997 1.4855 6 6 2.3412 -2.4200 2.7347 7 6 2.2812 -3.8006 3.2373 8 8 2.7992 -4.0837 4.3011 9 7 1.6524 -4.7523 2.5196 10 6 1.5921 -6.1276 3.0206 11 1 1.7008 -6.1887 4.1035 12 6 0.3992 -6.9303 2.4750 13 6 1.3103 -7.3396 1.3058 14 1 1.2782 -6.6477 0.4642 15 6 1.1460 -8.7780 0.8874 16 6 0.7494 -9.0801 -0.3995 17 6 0.5973 -10.4103 -0.7848 18 6 0.1703 -10.7411 -2.1677 19 7 -0.0126 -11.9467 -2.6679 20 7 -0.3811 -11.8127 -3.8956 21 7 -0.4378 -10.5604 -4.1888 22 7 -0.1107 -9.8715 -3.1485 23 6 0.8474 -11.4286 0.1319 24 6 1.2437 -11.1154 1.4167 25 6 1.3980 -9.7935 1.7924 26 6 2.4989 -7.1035 2.2524 27 6 2.9577 -1.4039 3.4004 28 17 3.7617 -1.5717 4.9298 29 16 2.8387 0.0533 2.5241 30 1 -0.3933 0.4416 0.7651 31 1 1.7924 -0.5138 -0.8900 32 1 1.5614 2.4679 -1.2085 33 1 1.5878 2.4586 1.2243 34 1 1.2161 -2.6676 0.8247 35 1 1.2391 -4.5265 1.6715 36 1 0.1057 -7.7642 3.1126 37 1 -0.4444 -6.3088 2.1743 38 1 0.5564 -8.2866 -1.1063 39 1 -0.5845 -12.5409 -4.5031 40 1 0.7306 -12.4614 -0.1616 41 1 1.4374 -11.9043 2.1284 42 1 1.7129 -9.5530 2.7971 43 1 3.3507 -6.6218 1.7720 44 1 2.7796 -7.9848 2.8292 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857610_17970274.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:32:13 Heat of formation + Delta-G solvation = 146.882796 kcal Electronic energy + Delta-G solvation = -32944.288989 eV Core-core repulsion = 28212.994082 eV Total energy + Delta-G solvation = -4731.294907 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.065 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -45.49870 -41.64251 -40.58927 -39.24803 -38.64850 -37.93620 -37.00908 -35.47835 -34.88429 -34.18226 -32.05328 -31.65689 -31.31218 -27.13128 -26.69101 -26.65048 -25.90030 -25.50868 -24.93108 -23.05910 -22.31829 -22.08325 -20.84995 -20.42250 -19.79803 -19.42766 -18.18330 -18.15128 -17.92953 -17.66327 -16.96021 -16.52954 -16.48507 -16.28077 -16.07249 -15.78957 -15.69901 -15.44710 -15.11714 -14.78004 -14.63521 -14.50680 -14.36830 -14.26806 -14.15555 -13.92692 -13.46404 -13.37986 -13.27445 -12.95564 -12.80248 -12.59502 -12.47895 -12.45415 -12.43004 -12.24525 -12.11067 -12.04295 -11.79192 -11.70535 -11.55467 -11.19071 -10.97585 -10.71419 -10.14667 -9.87433 -9.76204 -9.65041 -9.53859 -5.03056 -0.61794 -0.28989 -0.17644 0.14583 0.40690 0.49388 0.73585 1.05955 1.19847 1.30546 1.38528 1.53570 1.91007 2.14631 2.18110 2.64728 2.78798 3.13345 3.26156 3.49241 3.51392 3.73912 3.76664 3.85689 3.90662 3.97296 4.05450 4.10976 4.22560 4.27170 4.39274 4.39705 4.44611 4.54806 4.59117 4.71865 4.80022 4.83587 4.89034 4.91991 4.98725 5.04341 5.09002 5.10945 5.21040 5.44914 5.48959 5.55286 5.57201 5.71397 5.95859 6.42988 6.47507 7.07511 7.16408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.028 4.028 3 Si 0.702 3.298 4 C -0.225 4.225 5 C -0.067 4.067 6 C -0.166 4.166 7 C 0.573 3.427 8 O -0.558 6.558 9 N -0.693 5.693 10 C 0.116 3.884 11 H 0.090 0.910 12 C -0.125 4.125 13 C -0.066 4.066 14 H 0.109 0.891 15 C -0.073 4.073 16 C -0.080 4.080 17 C -0.036 4.036 18 C 0.209 3.791 19 N -0.299 5.299 20 N -0.203 5.203 21 N -0.059 5.059 22 N -0.295 5.295 23 C -0.091 4.091 24 C -0.119 4.119 25 C -0.095 4.095 26 C -0.140 4.140 27 C -0.139 4.139 28 Cl 0.003 6.997 29 S 0.261 5.739 30 H 0.389 0.611 31 H 0.150 0.850 32 H -0.270 1.270 33 H -0.257 1.257 34 H 0.180 0.820 35 H 0.414 0.586 36 H 0.106 0.894 37 H 0.085 0.915 38 H 0.133 0.867 39 H 0.494 0.506 40 H 0.135 0.865 41 H 0.151 0.849 42 H 0.148 0.852 43 H 0.067 0.933 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.471 -0.982 -2.969 3.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.141 4.141 3 Si 0.604 3.396 4 C -0.342 4.342 5 C -0.096 4.096 6 C -0.186 4.186 7 C 0.359 3.641 8 O -0.437 6.437 9 N -0.344 5.344 10 C 0.011 3.989 11 H 0.108 0.892 12 C -0.162 4.162 13 C -0.084 4.084 14 H 0.127 0.873 15 C -0.073 4.073 16 C -0.100 4.100 17 C -0.040 4.040 18 C -0.071 4.071 19 N -0.151 5.151 20 N -0.053 5.053 21 N -0.054 5.054 22 N -0.167 5.167 23 C -0.111 4.111 24 C -0.137 4.137 25 C -0.114 4.114 26 C -0.178 4.178 27 C -0.285 4.285 28 Cl 0.032 6.968 29 S 0.527 5.473 30 H 0.239 0.761 31 H 0.167 0.833 32 H -0.195 1.195 33 H -0.183 1.183 34 H 0.198 0.802 35 H 0.251 0.749 36 H 0.124 0.876 37 H 0.103 0.897 38 H 0.151 0.849 39 H 0.352 0.648 40 H 0.153 0.847 41 H 0.169 0.831 42 H 0.165 0.835 43 H 0.086 0.914 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.149 0.939 -3.017 3.163 hybrid contribution -1.548 -2.199 0.044 2.690 sum -1.399 -1.260 -2.973 3.518 Atomic orbital electron populations 1.86629 1.17397 1.80128 1.50193 1.24483 0.83584 1.09904 0.96099 0.94514 0.90946 0.73958 0.80216 1.24859 1.08275 0.98563 1.02550 1.21150 0.98810 0.95482 0.94120 1.20332 1.06384 0.94064 0.97793 1.17651 0.78161 0.84448 0.83799 1.90860 1.46964 1.82552 1.23353 1.45401 1.56449 1.07992 1.24605 1.21879 0.97882 0.80128 0.99060 0.89226 1.23401 0.96288 0.99936 0.96614 1.21589 0.97028 0.92170 0.97647 0.87333 1.19705 0.99040 0.95851 0.92679 1.21129 0.97612 0.94709 0.96576 1.17387 1.05174 0.95009 0.86407 1.24022 1.01179 0.84558 0.97299 1.74892 1.19660 1.24831 0.95755 1.47818 1.40811 1.08655 1.08062 1.78884 1.15534 0.90292 1.20681 1.76063 1.16948 1.26963 0.96723 1.21313 0.97516 0.98968 0.93287 1.21365 0.99094 0.97507 0.95703 1.21488 0.97293 0.92131 1.00445 1.23565 0.96830 0.99708 0.97714 1.25796 1.04742 1.02051 0.95943 1.98426 1.76366 1.97497 1.24488 1.83336 1.49902 1.04767 1.09332 0.76077 0.83270 1.19506 1.18269 0.80241 0.74864 0.87566 0.89653 0.84882 0.64755 0.84733 0.83102 0.83470 0.91423 0.87861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.00 12.88 -148.98 -1.92 0.09 16 2 C -0.03 0.18 2.94 71.24 0.21 0.39 16 3 Si 0.70 -3.82 30.92 68.60 2.12 -1.70 16 4 C -0.22 1.07 5.65 24.51 0.14 1.21 16 5 C -0.07 0.27 9.75 22.70 0.22 0.49 16 6 C -0.17 -0.35 5.98 -19.84 -0.12 -0.47 16 7 C 0.57 2.91 7.79 86.55 0.67 3.59 16 8 O -0.56 -7.18 14.51 -4.23 -0.06 -7.24 16 9 N -0.69 1.24 5.24 -443.65 -2.33 -1.08 16 10 C 0.12 -0.26 4.32 45.52 0.20 -0.06 16 11 H 0.09 0.18 7.46 -2.39 -0.02 0.16 16 12 C -0.12 0.74 7.29 31.12 0.23 0.97 16 13 C -0.07 0.35 3.85 -11.02 -0.04 0.31 16 14 H 0.11 -0.74 8.09 -2.39 -0.02 -0.76 16 15 C -0.07 0.16 5.28 -19.90 -0.11 0.06 16 16 C -0.08 -0.10 9.36 22.48 0.21 0.11 16 17 C -0.04 -0.13 5.88 -20.04 -0.12 -0.24 16 18 C 0.21 1.27 7.94 137.38 1.09 2.36 16 19 N -0.30 -1.04 12.08 -52.13 -0.63 -1.67 16 20 N -0.20 0.15 7.90 37.02 0.29 0.44 16 21 N -0.06 -0.30 13.47 37.02 0.50 0.20 16 22 N -0.29 -2.38 12.24 -52.18 -0.64 -3.02 16 23 C -0.09 -0.05 9.70 22.47 0.22 0.17 16 24 C -0.12 0.33 10.03 22.24 0.22 0.55 16 25 C -0.10 0.34 8.62 22.31 0.19 0.53 16 26 C -0.14 0.51 7.25 31.12 0.23 0.73 16 27 C -0.14 -0.50 6.87 67.35 0.46 -0.03 16 28 Cl 0.00 0.03 27.20 -2.72 -0.07 -0.05 16 29 S 0.26 -0.63 20.19 -56.49 -1.14 -1.77 16 30 H 0.39 -3.40 8.70 -74.06 -0.64 -4.04 16 31 H 0.15 -1.42 7.96 -2.39 -0.02 -1.44 16 32 H -0.27 -0.37 7.11 99.48 0.71 0.34 16 33 H -0.26 0.49 7.11 99.48 0.71 1.20 16 34 H 0.18 -1.65 7.10 -2.91 -0.02 -1.67 16 35 H 0.41 -3.05 7.24 -92.71 -0.67 -3.72 16 36 H 0.11 -0.72 7.73 -2.39 -0.02 -0.74 16 37 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 38 H 0.13 0.12 7.88 -2.91 -0.02 0.10 16 39 H 0.49 -5.08 8.96 -347.53 -3.12 -8.19 16 40 H 0.13 -0.09 7.88 -2.91 -0.02 -0.11 16 41 H 0.15 -1.07 8.06 -2.91 -0.02 -1.10 16 42 H 0.15 -1.10 6.64 -2.91 -0.02 -1.12 16 43 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 44 H 0.10 -0.51 6.30 -2.39 -0.02 -0.53 16 Total: 0.00 -24.24 405.64 -3.22 -27.47 By element: Atomic # 1 Polarization: -19.07 SS G_CDS: -3.25 Total: -22.32 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: 3.91 Total: 10.66 kcal Atomic # 7 Polarization: -2.33 SS G_CDS: -2.80 Total: -5.13 kcal Atomic # 8 Polarization: -5.17 SS G_CDS: -1.98 Total: -7.15 kcal Atomic # 14 Polarization: -3.82 SS G_CDS: 2.12 Total: -1.70 kcal Atomic # 16 Polarization: -0.63 SS G_CDS: -1.14 Total: -1.77 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -0.07 Total: -0.05 kcal Total: -24.24 -3.22 -27.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17970274.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 174.349 kcal (2) G-P(sol) polarization free energy of solvation -24.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 150.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.466 kcal (6) G-S(sol) free energy of system = (1) + (5) 146.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds