Wall clock time and date at job start Sat Mar 6 2021 03:32:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47009 * 2 1 4 4 C 1.50693 * 109.47044 * 240.00078 * 2 1 3 5 5 C 1.31115 * 118.54766 * 120.02209 * 4 2 1 6 6 N 1.38925 * 121.84921 * 180.37999 * 5 4 2 7 7 C 1.47030 * 118.88355 * 346.68340 * 6 5 4 8 8 C 1.50695 * 109.87337 * 163.23296 * 7 6 5 9 9 O 1.21286 * 119.99919 * 340.89548 * 8 7 6 10 10 N 1.34776 * 120.00427 * 160.89905 * 8 7 6 11 11 C 1.46503 * 120.00614 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84546 * 334.66565 * 11 10 8 13 13 C 1.53774 * 113.61663 * 105.85880 * 11 10 8 14 14 C 1.54055 * 86.98461 * 89.16277 * 13 11 10 15 15 H 1.08997 * 113.69170 * 270.87283 * 14 13 11 16 16 C 1.50705 * 113.61623 * 139.97551 * 14 13 11 17 17 C 1.38004 * 119.93490 * 142.50835 * 16 14 13 18 18 C 1.39318 * 119.88145 * 180.02562 * 17 16 14 19 19 C 1.48464 * 120.12192 * 179.97438 * 18 17 16 20 20 N 1.31808 * 126.67359 * 179.71455 * 19 18 17 21 21 N 1.28876 * 107.81855 * 179.83608 * 20 19 18 22 22 N 1.28728 * 109.31197 * 0.43188 * 21 20 19 23 23 N 1.28985 * 108.94993 * 359.72952 * 22 21 20 24 24 C 1.39292 * 119.76547 * 0.02562 * 18 17 16 25 25 C 1.38047 * 119.87594 * 0.02562 * 24 18 17 26 26 C 1.38298 * 120.12031 * 359.72183 * 25 24 18 27 27 C 1.53777 * 113.61644 * 203.47335 * 11 10 8 28 28 C 1.53544 * 107.65748 * 43.66645 * 7 6 5 29 29 C 1.50208 * 118.54580 * 299.99731 * 4 2 1 30 30 H 0.96699 * 114.00131 * 59.99932 * 1 2 3 31 31 H 1.09002 * 109.46731 * 119.99798 * 2 1 3 32 32 H 1.48503 * 110.00104 * 298.68076 * 3 2 1 33 33 H 1.48495 * 109.99984 * 59.99789 * 3 2 1 34 34 H 1.08001 * 119.07514 * 0.40723 * 5 4 2 35 35 H 0.97002 * 120.55853 * 166.70800 * 6 5 4 36 36 H 1.09002 * 109.82341 * 284.12636 * 7 6 5 37 37 H 0.97002 * 119.99777 * 359.97438 * 10 8 7 38 38 H 1.08998 * 113.61895 * 203.66590 * 13 11 10 39 39 H 1.09006 * 113.61431 * 334.57505 * 13 11 10 40 40 H 1.08005 * 120.06708 * 359.97438 * 17 16 14 41 41 H 0.97002 * 125.34861 * 180.16477 * 21 20 19 42 42 H 1.07997 * 120.06289 * 179.97438 * 24 18 17 43 43 H 1.08004 * 119.93948 * 179.97438 * 25 24 18 44 44 H 1.08000 * 119.88321 * 180.27192 * 26 25 24 45 45 H 1.08998 * 113.61302 * 25.42496 * 27 11 10 46 46 H 1.08996 * 113.61696 * 156.33721 * 27 11 10 47 47 H 1.08993 * 109.62385 * 58.77149 * 28 7 6 48 48 H 1.08998 * 109.62331 * 179.32799 * 28 7 6 49 49 H 1.08991 * 109.33119 * 39.71519 * 29 4 2 50 50 H 1.08998 * 109.19108 * 280.14479 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.6834 -0.0461 -2.0743 6 7 3.1771 -0.6309 -3.2337 7 6 3.1021 -2.0921 -3.3796 8 6 3.2971 -2.4733 -4.8244 9 8 3.1366 -1.6462 -5.6968 10 7 3.6497 -3.7334 -5.1472 11 6 3.8398 -4.1040 -6.5518 12 1 3.2736 -3.4725 -7.2365 13 6 5.3153 -4.2754 -6.9494 14 6 5.1742 -5.7494 -6.5243 15 1 5.3975 -5.9250 -5.4720 16 6 5.8824 -6.7128 -7.4416 17 6 6.5190 -7.8199 -6.9188 18 6 7.1739 -8.7095 -7.7677 19 6 7.8610 -9.9020 -7.2109 20 7 8.5115 -10.8249 -7.8910 21 7 8.9661 -11.6881 -7.0490 22 7 8.6165 -11.3463 -5.8582 23 7 7.9355 -10.2526 -5.9192 24 6 7.1827 -8.4756 -9.1408 25 6 6.5436 -7.3644 -9.6532 26 6 5.8906 -6.4873 -8.8064 27 6 3.6716 -5.6088 -6.8201 28 6 1.7104 -2.5365 -2.9071 29 6 1.5486 -2.1483 -1.4356 30 1 -0.3933 0.4417 -0.7650 31 1 1.7922 -0.5138 0.8900 32 1 1.5878 2.4586 -1.2243 33 1 1.5614 2.4679 1.2084 34 1 2.9264 0.9846 -1.8619 35 1 3.5650 -0.0846 -3.9351 36 1 3.8691 -2.5646 -2.7660 37 1 3.7783 -4.3949 -4.4495 38 1 5.4982 -4.1442 -8.0159 39 1 6.0044 -3.7042 -6.3273 40 1 6.5104 -7.9962 -5.8532 41 1 9.4864 -12.4744 -7.2771 42 1 7.6892 -9.1618 -9.8033 43 1 6.5501 -7.1818 -10.7177 44 1 5.3881 -5.6216 -9.2118 45 1 3.0346 -6.1133 -6.0937 46 1 3.4060 -5.8415 -7.8513 47 1 0.9454 -2.0391 -3.5031 48 1 1.6157 -3.6171 -3.0131 49 1 0.5102 -2.2915 -1.1368 50 1 2.1907 -2.7809 -0.8228 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857610_17980846.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:32:23 Heat of formation + Delta-G solvation = 134.379356 kcal Electronic energy + Delta-G solvation = -33526.761681 eV Core-core repulsion = 28945.523262 eV Total energy + Delta-G solvation = -4581.238419 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.174 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -45.42858 -41.84364 -40.91798 -39.73489 -38.80436 -37.37973 -35.43189 -34.95412 -34.32091 -33.19871 -33.00685 -32.03463 -31.38158 -27.80611 -26.87787 -26.36612 -25.59146 -25.46510 -25.23293 -23.76098 -23.12536 -22.32025 -21.87848 -20.48842 -19.90561 -19.46870 -19.06383 -18.28966 -18.11097 -17.87580 -17.28723 -16.78077 -16.66817 -16.47668 -16.20850 -16.00006 -15.87801 -15.48217 -15.29928 -15.12320 -15.11035 -14.77907 -14.55823 -14.39603 -14.24999 -14.11335 -13.88799 -13.62829 -13.39503 -13.34607 -13.14546 -12.94891 -12.85958 -12.57190 -12.36289 -12.23262 -12.17867 -12.08959 -11.94073 -11.86240 -11.68649 -11.66415 -11.36967 -11.25615 -10.85906 -10.30559 -10.20741 -9.85236 -9.62810 -8.47868 -4.88171 -0.30919 0.20975 0.30419 1.26690 1.30523 1.34620 1.40429 1.50570 1.66076 1.78880 2.07755 2.58225 2.66106 2.69872 3.17640 3.30281 3.42010 3.54341 3.57576 3.62612 3.70533 3.77401 3.82264 3.87517 3.97627 4.01878 4.07465 4.18284 4.27199 4.35195 4.35647 4.40814 4.49998 4.54951 4.56824 4.59310 4.66261 4.71261 4.74703 4.77380 4.86739 4.88588 4.97402 4.99487 5.01854 5.16029 5.27461 5.32526 5.38222 5.40583 5.42824 5.54378 5.55784 5.83149 6.17914 6.35198 6.60905 6.80467 7.03717 7.16183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.049 4.049 3 Si 0.661 3.339 4 C -0.277 4.277 5 C 0.143 3.857 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.516 3.484 9 O -0.528 6.528 10 N -0.709 5.709 11 C 0.119 3.881 12 H 0.105 0.895 13 C -0.143 4.143 14 C -0.073 4.073 15 H 0.101 0.899 16 C -0.074 4.074 17 C -0.071 4.071 18 C -0.016 4.016 19 C 0.217 3.783 20 N -0.293 5.293 21 N -0.226 5.226 22 N -0.046 5.046 23 N -0.268 5.268 24 C -0.083 4.083 25 C -0.118 4.118 26 C -0.095 4.095 27 C -0.135 4.135 28 C -0.126 4.126 29 C -0.054 4.054 30 H 0.373 0.627 31 H 0.108 0.892 32 H -0.264 1.264 33 H -0.261 1.261 34 H 0.134 0.866 35 H 0.409 0.591 36 H 0.093 0.907 37 H 0.404 0.596 38 H 0.097 0.903 39 H 0.076 0.924 40 H 0.135 0.865 41 H 0.477 0.523 42 H 0.133 0.867 43 H 0.132 0.868 44 H 0.129 0.871 45 H 0.079 0.921 46 H 0.100 0.900 47 H 0.075 0.925 48 H 0.079 0.921 49 H 0.079 0.921 50 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.466 -3.464 -2.248 5.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.160 4.160 3 Si 0.563 3.437 4 C -0.288 4.288 5 C 0.022 3.978 6 N -0.364 5.364 7 C 0.027 3.973 8 C 0.301 3.699 9 O -0.404 6.404 10 N -0.360 5.360 11 C 0.013 3.987 12 H 0.123 0.877 13 C -0.182 4.182 14 C -0.091 4.091 15 H 0.119 0.881 16 C -0.074 4.074 17 C -0.091 4.091 18 C -0.019 4.019 19 C -0.063 4.063 20 N -0.145 5.145 21 N -0.072 5.072 22 N -0.041 5.041 23 N -0.141 5.141 24 C -0.103 4.103 25 C -0.136 4.136 26 C -0.114 4.114 27 C -0.173 4.173 28 C -0.165 4.165 29 C -0.091 4.091 30 H 0.220 0.780 31 H 0.126 0.874 32 H -0.189 1.189 33 H -0.186 1.186 34 H 0.151 0.849 35 H 0.246 0.754 36 H 0.110 0.890 37 H 0.239 0.761 38 H 0.115 0.885 39 H 0.095 0.905 40 H 0.153 0.847 41 H 0.332 0.668 42 H 0.151 0.849 43 H 0.150 0.850 44 H 0.147 0.853 45 H 0.098 0.902 46 H 0.118 0.882 47 H 0.094 0.906 48 H 0.098 0.902 49 H 0.097 0.903 50 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 3.424 -2.881 -1.824 4.832 hybrid contribution -0.499 -0.666 -0.986 1.290 sum 2.925 -3.547 -2.810 5.389 Atomic orbital electron populations 1.86561 1.18652 1.79779 1.49170 1.24665 0.83337 1.09162 0.98815 0.95622 0.92263 0.75822 0.79963 1.20928 1.08137 0.98510 1.01181 1.20358 0.93828 0.96630 0.86972 1.44273 1.68056 1.04528 1.19522 1.21002 0.99656 0.84049 0.92601 1.20622 0.75932 0.82309 0.91028 1.90743 1.49828 1.49563 1.50229 1.45618 1.70383 1.11693 1.08332 1.21871 0.97266 0.96596 0.82942 0.87669 1.23619 0.96878 0.94991 1.02671 1.21659 0.95040 0.93574 0.98826 0.88085 1.19569 0.98450 0.95401 0.93960 1.21059 0.95230 0.92708 1.00147 1.17207 1.00291 0.91078 0.93349 1.23727 0.99080 0.96485 0.87002 1.74926 1.15597 1.02209 1.21720 1.47766 1.36077 1.21088 1.02249 1.78953 1.10053 1.08811 1.06286 1.76095 1.14644 1.05495 1.17908 1.21201 0.98085 0.97543 0.93462 1.21103 0.97838 0.94292 1.00342 1.21213 0.98179 0.99197 0.92824 1.23430 0.95587 0.94677 1.03601 1.21874 0.94990 1.01527 0.98120 1.19952 1.02297 0.92701 0.94180 0.77986 0.87388 1.18915 1.18599 0.84946 0.75385 0.88966 0.76112 0.88508 0.90549 0.84680 0.66819 0.84946 0.85033 0.85315 0.90248 0.88174 0.90647 0.90250 0.90297 0.91392 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.06 12.54 -35.23 -0.44 -1.50 16 2 C -0.05 -0.01 2.83 36.00 0.10 0.09 16 3 Si 0.66 -0.19 29.68 -169.99 -5.05 -5.24 16 4 C -0.28 0.04 5.44 -101.34 -0.55 -0.51 16 5 C 0.14 -0.07 9.63 -16.08 -0.15 -0.23 16 6 N -0.73 0.23 5.47 -55.34 -0.30 -0.07 16 7 C 0.14 -0.19 3.36 -68.51 -0.23 -0.42 16 8 C 0.52 -0.04 7.09 -10.99 -0.08 -0.12 16 9 O -0.53 -2.06 15.71 5.55 0.09 -1.98 16 10 N -0.71 1.86 5.26 -53.02 -0.28 1.58 16 11 C 0.12 -0.26 4.29 -67.12 -0.29 -0.55 16 12 H 0.11 -0.04 7.50 -51.93 -0.39 -0.43 16 13 C -0.14 0.36 7.27 -25.78 -0.19 0.18 16 14 C -0.07 0.22 3.87 -90.81 -0.35 -0.13 16 15 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 16 C -0.07 0.10 5.29 -104.67 -0.55 -0.45 16 17 C -0.07 0.00 9.36 -39.27 -0.37 -0.37 16 18 C -0.02 -0.02 5.88 -104.89 -0.62 -0.63 16 19 C 0.22 0.50 7.94 -156.31 -1.24 -0.74 16 20 N -0.29 -0.37 12.08 32.17 0.39 0.02 16 21 N -0.23 0.16 7.90 60.35 0.48 0.64 16 22 N -0.05 -0.09 13.47 60.35 0.81 0.72 16 23 N -0.27 -0.87 12.23 32.16 0.39 -0.48 16 24 C -0.08 0.01 9.70 -39.26 -0.38 -0.37 16 25 C -0.12 0.16 10.03 -39.63 -0.40 -0.23 16 26 C -0.10 0.17 8.60 -39.53 -0.34 -0.17 16 27 C -0.14 0.46 7.29 -25.92 -0.19 0.27 16 28 C -0.13 0.17 5.47 -26.43 -0.14 0.03 16 29 C -0.05 0.04 5.83 -28.10 -0.16 -0.13 16 30 H 0.37 -0.21 8.70 45.56 0.40 0.19 16 31 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 32 H -0.26 -0.50 7.10 56.52 0.40 -0.10 16 33 H -0.26 -0.88 7.11 56.52 0.40 -0.48 16 34 H 0.13 -0.24 4.37 -52.49 -0.23 -0.47 16 35 H 0.41 -0.02 8.10 -40.82 -0.33 -0.35 16 36 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.40 -2.04 8.70 -40.82 -0.36 -2.40 16 38 H 0.10 -0.28 6.32 -51.93 -0.33 -0.60 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.14 -0.06 7.88 -52.48 -0.41 -0.47 16 41 H 0.48 -2.54 8.96 -340.36 -3.05 -5.59 16 42 H 0.13 -0.10 7.88 -52.49 -0.41 -0.52 16 43 H 0.13 -0.42 8.06 -52.48 -0.42 -0.85 16 44 H 0.13 -0.44 6.66 -52.49 -0.35 -0.79 16 45 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.10 -0.35 7.71 -51.93 -0.40 -0.75 16 47 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 48 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 49 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 50 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 411.29 15.07 6.20 6.20 Total: 0.00 -10.23 411.29 -13.11 -23.34 By element: Atomic # 1 Polarization: -9.50 SS G_CDS: -9.26 Total: -18.76 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -6.13 Total: -4.48 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: 1.49 Total: 2.42 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -0.35 Total: -3.48 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.05 Total: -5.24 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.23 -13.11 -23.34 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857610_17980846.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 157.715 kcal (2) G-P(sol) polarization free energy of solvation -10.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 147.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.336 kcal (6) G-S(sol) free energy of system = (1) + (5) 134.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds