Wall clock time and date at job start Fri Mar 5 2021 21:53:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46949 * 2 1 4 4 C 1.50698 * 109.47290 * 120.00277 * 2 1 3 5 5 C 1.34451 * 126.47870 * 255.02678 * 4 2 1 6 6 N 1.36569 * 109.98369 * 179.97438 * 5 4 2 7 7 C 1.37831 * 109.85714 * 359.97438 * 6 5 4 8 8 C 1.38648 * 133.37213 * 180.02562 * 7 6 5 9 9 C 1.39323 * 119.66285 * 180.02562 * 8 7 6 10 10 C 1.47577 * 119.83113 * 179.97438 * 9 8 7 11 11 O 1.21583 * 120.00073 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99657 * 179.97438 * 10 9 8 13 13 C 1.46499 * 119.99665 * 179.72390 * 12 10 9 14 14 H 1.09002 * 112.85201 * 24.08188 * 13 12 10 15 15 C 1.53784 * 113.61491 * 155.28109 * 13 12 10 16 16 C 1.53777 * 87.08172 * 89.11442 * 15 13 12 17 17 H 1.08994 * 113.61502 * 270.88324 * 16 15 13 18 18 C 1.50707 * 113.61053 * 140.06685 * 16 15 13 19 19 C 1.38314 * 119.88181 * 299.72207 * 18 16 15 20 20 C 1.38022 * 120.11637 * 179.76809 * 19 18 16 21 21 C 1.39302 * 119.88251 * 0.51009 * 20 19 18 22 22 C 1.48458 * 120.12028 * 179.72547 * 21 20 19 23 23 N 1.31815 * 126.67440 * 0.02562 * 22 21 20 24 24 N 1.28875 * 107.82062 * 180.02562 * 23 22 21 25 25 N 1.28737 * 109.31249 * 359.97438 * 24 23 22 26 26 N 1.28976 * 108.94690 * 359.73068 * 25 24 23 27 27 C 1.39305 * 119.76668 * 359.74535 * 21 20 19 28 28 C 1.38031 * 119.87614 * 359.97438 * 27 21 20 29 29 C 1.53777 * 87.08146 * 25.43581 * 16 15 13 30 30 C 1.40206 * 120.33546 * 0.25464 * 9 8 7 31 31 C 1.36241 * 120.37592 * 359.47991 * 30 9 8 32 32 C 1.39879 * 119.95791 * 0.51776 * 31 30 9 33 33 H 0.96705 * 113.99971 * 299.99783 * 1 2 3 34 34 H 1.08999 * 109.46911 * 240.00271 * 2 1 3 35 35 H 1.48497 * 110.00143 * 300.00161 * 3 2 1 36 36 H 1.48493 * 109.99924 * 61.32131 * 3 2 1 37 37 H 1.07996 * 125.01002 * 0.02562 * 5 4 2 38 38 H 0.96997 * 125.06656 * 180.02562 * 6 5 4 39 39 H 1.07992 * 120.17179 * 0.02562 * 8 7 6 40 40 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 41 41 H 1.08999 * 113.61037 * 203.66621 * 15 13 12 42 42 H 1.08999 * 113.61254 * 334.47782 * 15 13 12 43 43 H 1.07999 * 119.94200 * 0.02577 * 19 18 16 44 44 H 1.08002 * 120.06091 * 180.25149 * 20 19 18 45 45 H 0.96998 * 125.34177 * 180.02562 * 24 23 22 46 46 H 1.07990 * 120.06232 * 180.02562 * 27 21 20 47 47 H 1.08005 * 119.93877 * 180.02562 * 28 27 21 48 48 H 1.08999 * 113.61239 * 220.01646 * 29 16 15 49 49 H 1.08999 * 113.61926 * 89.11880 * 29 16 15 50 50 H 1.07993 * 119.81253 * 179.72433 * 30 9 8 51 51 H 1.08000 * 120.01707 * 180.26055 * 31 30 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4612 -0.1363 2.3246 6 7 2.8027 -1.0947 3.2356 7 6 2.4936 -2.3431 2.7400 8 6 2.6293 -3.6278 3.2435 9 6 2.2119 -4.7155 2.4794 10 6 2.3551 -6.0845 3.0114 11 8 2.8367 -6.2611 4.1137 12 7 1.9518 -7.1391 2.2753 13 6 2.0996 -8.4985 2.8009 14 1 2.1397 -8.5294 3.8898 15 6 1.1092 -9.5054 2.1923 16 6 2.1596 -9.7572 1.0977 17 1 2.0661 -9.0899 0.2410 18 6 2.2820 -11.2058 0.7005 19 6 2.6445 -12.1506 1.6434 20 6 2.7534 -13.4793 1.2860 21 6 2.5080 -13.8666 -0.0294 22 6 2.6295 -15.2935 -0.4209 23 7 2.9592 -16.2999 0.3639 24 7 2.9551 -17.3736 -0.3488 25 7 2.6329 -17.0794 -1.5600 26 7 2.4196 -15.8099 -1.6400 27 6 2.1484 -12.9102 -0.9763 28 6 2.0366 -11.5850 -0.6068 29 6 3.2171 -9.3049 2.1184 30 6 1.6618 -4.5163 1.2052 31 6 1.5200 -3.2569 0.7052 32 6 1.9344 -2.1548 1.4603 33 1 -0.3933 0.4417 0.7651 34 1 1.7923 -0.5138 -0.8900 35 1 1.5614 2.4679 -1.2084 36 1 1.5879 2.4585 1.2242 37 1 2.5960 0.9262 2.4632 38 1 3.2025 -0.9224 4.1024 39 1 3.0564 -3.7846 4.2229 40 1 1.5679 -6.9983 1.3957 41 1 0.9228 -10.3721 2.8263 42 1 0.1923 -9.0466 1.8222 43 1 2.8386 -11.8488 2.6620 44 1 3.0326 -14.2169 2.0239 45 1 3.1616 -18.2638 -0.0235 46 1 1.9566 -13.2052 -1.9972 47 1 1.7575 -10.8427 -1.3401 48 1 4.0025 -8.6842 1.6874 49 1 3.6070 -10.1169 2.7322 50 1 1.3451 -5.3658 0.6184 51 1 1.0917 -3.1100 -0.2753 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857820_17904044.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 21:53:26 Heat of formation + Delta-G solvation = 177.280246 kcal Electronic energy + Delta-G solvation = -36612.960148 eV Core-core repulsion = 31676.215109 eV Total energy + Delta-G solvation = -4936.745039 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.159 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -45.37510 -42.49882 -41.60934 -40.40946 -38.99542 -37.93405 -37.45979 -35.40900 -34.84819 -34.07089 -33.27292 -32.00684 -31.60619 -30.72688 -30.41130 -26.99659 -26.79100 -26.50774 -25.67130 -25.00662 -24.03903 -23.62807 -23.42810 -22.17429 -21.55708 -20.85598 -20.34516 -20.00648 -19.46231 -18.48205 -18.05974 -17.97199 -17.65324 -17.21812 -16.99400 -16.53517 -16.35598 -16.22944 -15.88470 -15.73876 -15.67255 -15.37522 -15.12006 -14.92561 -14.82281 -14.73161 -14.64540 -14.40522 -14.39729 -14.18961 -13.89919 -13.65867 -13.50052 -13.39118 -13.10812 -13.03038 -12.62586 -12.49614 -12.36264 -12.30404 -12.18329 -12.09826 -12.03781 -11.82935 -11.80791 -11.51839 -11.26592 -10.91910 -10.76462 -10.50211 -10.08254 -9.94400 -9.46703 -9.35964 -8.82678 -4.98595 -0.28077 -0.26334 0.25625 0.39346 0.41014 1.27563 1.31653 1.35183 1.38304 1.53125 1.85307 1.93826 2.01352 2.20113 2.73052 2.75996 2.92863 3.24606 3.37960 3.45863 3.56632 3.60585 3.64873 3.72891 3.75127 3.84290 3.85709 3.95693 3.99700 4.09188 4.16906 4.28869 4.31021 4.41063 4.42447 4.47402 4.49356 4.55817 4.57013 4.61191 4.66788 4.74247 4.81506 4.87148 4.90257 4.96502 4.98735 5.06182 5.08295 5.23530 5.34360 5.43239 5.43827 5.45209 5.47564 5.55069 5.60478 5.64448 5.89067 5.98067 6.34543 6.47777 6.49140 7.21416 7.24154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.584 5.584 7 C 0.082 3.918 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.709 5.709 13 C 0.120 3.880 14 H 0.107 0.893 15 C -0.135 4.135 16 C -0.077 4.077 17 H 0.100 0.900 18 C -0.049 4.049 19 C -0.120 4.120 20 C -0.075 4.075 21 C -0.024 4.024 22 C 0.218 3.782 23 N -0.294 5.294 24 N -0.226 5.226 25 N -0.046 5.046 26 N -0.269 5.269 27 C -0.072 4.072 28 C -0.117 4.117 29 C -0.144 4.144 30 C -0.113 4.113 31 C -0.071 4.071 32 C -0.063 4.063 33 H 0.374 0.626 34 H 0.115 0.885 35 H -0.256 1.256 36 H -0.260 1.260 37 H 0.176 0.824 38 H 0.422 0.578 39 H 0.136 0.864 40 H 0.402 0.598 41 H 0.100 0.900 42 H 0.078 0.922 43 H 0.132 0.868 44 H 0.133 0.867 45 H 0.477 0.523 46 H 0.136 0.864 47 H 0.131 0.869 48 H 0.076 0.924 49 H 0.097 0.903 50 H 0.126 0.874 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.606 2.147 0.841 2.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.126 4.126 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.361 5.361 13 C 0.014 3.986 14 H 0.125 0.875 15 C -0.173 4.173 16 C -0.096 4.096 17 H 0.119 0.881 18 C -0.050 4.050 19 C -0.138 4.138 20 C -0.096 4.096 21 C -0.027 4.027 22 C -0.062 4.062 23 N -0.146 5.146 24 N -0.072 5.072 25 N -0.042 5.042 26 N -0.142 5.142 27 C -0.092 4.092 28 C -0.135 4.135 29 C -0.182 4.182 30 C -0.133 4.133 31 C -0.090 4.090 32 C -0.068 4.068 33 H 0.221 0.779 34 H 0.133 0.867 35 H -0.180 1.180 36 H -0.185 1.185 37 H 0.193 0.807 38 H 0.260 0.740 39 H 0.154 0.846 40 H 0.238 0.762 41 H 0.118 0.882 42 H 0.097 0.903 43 H 0.150 0.850 44 H 0.151 0.849 45 H 0.331 0.669 46 H 0.154 0.846 47 H 0.149 0.851 48 H 0.095 0.905 49 H 0.115 0.885 50 H 0.143 0.857 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.855 2.053 0.771 2.872 hybrid contribution -0.873 -0.408 0.968 1.366 sum 0.982 1.644 1.739 2.587 Atomic orbital electron populations 1.86612 1.18063 1.79929 1.49076 1.24289 0.83385 1.09889 0.97244 0.95171 0.91504 0.74313 0.80541 1.20668 1.10575 0.92095 0.98072 1.21823 0.99724 0.94499 0.89416 1.41726 1.54660 1.04035 1.18150 1.18079 1.03234 0.86289 0.94859 1.20074 0.99398 0.88070 1.00155 1.19409 1.05117 0.92257 0.95806 1.18145 0.77300 0.84496 0.84552 1.90794 1.44200 1.86173 1.20174 1.45557 1.64240 1.05263 1.21013 1.21858 0.96363 0.80548 0.99817 0.87507 1.23433 0.97251 0.99276 0.97353 1.21668 0.97624 0.92597 0.97672 0.88142 1.19877 0.96720 0.94972 0.93420 1.20941 1.00826 0.92042 0.99942 1.21155 0.97297 0.96516 0.94597 1.17234 1.05515 0.85333 0.94618 1.23744 1.00369 0.95414 0.86635 1.74924 1.22160 0.93388 1.24099 1.47761 1.43377 1.11177 1.04926 1.78951 1.12590 1.09677 1.02944 1.76096 1.18248 0.99044 1.20790 1.21195 0.96373 0.92160 0.99487 1.21010 1.00931 0.95677 0.95891 1.23582 0.96971 1.00067 0.97625 1.20682 1.00631 0.97337 0.94661 1.20206 0.98639 0.90445 0.99707 1.19168 1.00993 0.93037 0.93580 0.77883 0.86702 1.18037 1.18489 0.80703 0.74011 0.84613 0.76221 0.88162 0.90288 0.85050 0.84907 0.66867 0.84578 0.85123 0.90494 0.88470 0.85659 0.85137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.47 12.88 -35.23 -0.45 -0.92 16 2 C -0.04 0.03 3.06 36.00 0.11 0.14 16 3 Si 0.68 -1.43 30.82 -169.99 -5.24 -6.67 16 4 C -0.21 0.06 5.57 -102.74 -0.57 -0.51 16 5 C 0.07 -0.14 10.43 -16.78 -0.17 -0.32 16 6 N -0.58 0.90 6.07 -10.68 -0.06 0.83 16 7 C 0.08 0.08 7.26 -84.00 -0.61 -0.53 16 8 C -0.06 -0.09 9.61 -39.03 -0.37 -0.47 16 9 C -0.12 -0.17 5.87 -104.95 -0.62 -0.79 16 10 C 0.57 1.33 7.76 -12.45 -0.10 1.23 16 11 O -0.54 -3.17 15.91 5.29 0.08 -3.08 16 12 N -0.71 0.51 5.21 -54.04 -0.28 0.23 16 13 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 14 H 0.11 0.07 7.47 -51.93 -0.39 -0.32 16 15 C -0.14 0.35 7.29 -25.92 -0.19 0.16 16 16 C -0.08 0.19 3.85 -90.96 -0.35 -0.16 16 17 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 18 C -0.05 0.05 5.29 -104.56 -0.55 -0.50 16 19 C -0.12 0.10 8.61 -39.63 -0.34 -0.24 16 20 C -0.08 -0.03 9.70 -39.27 -0.38 -0.41 16 21 C -0.02 -0.04 5.88 -104.89 -0.62 -0.66 16 22 C 0.22 0.64 7.94 -156.30 -1.24 -0.60 16 23 N -0.29 -0.53 12.08 32.17 0.39 -0.14 16 24 N -0.23 0.04 7.90 60.35 0.48 0.52 16 25 N -0.05 -0.12 13.47 60.35 0.81 0.69 16 26 N -0.27 -1.06 12.23 32.16 0.39 -0.67 16 27 C -0.07 -0.05 9.70 -39.26 -0.38 -0.43 16 28 C -0.12 0.08 9.69 -39.63 -0.38 -0.30 16 29 C -0.14 0.24 7.25 -25.92 -0.19 0.05 16 30 C -0.11 0.03 9.46 -39.56 -0.37 -0.34 16 31 C -0.07 -0.03 10.03 -39.69 -0.40 -0.43 16 32 C -0.06 -0.08 6.35 -105.05 -0.67 -0.75 16 33 H 0.37 -0.71 8.70 45.56 0.40 -0.31 16 34 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 35 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 36 H -0.26 0.21 6.99 56.52 0.40 0.60 16 37 H 0.18 -0.81 6.27 -52.49 -0.33 -1.14 16 38 H 0.42 -1.77 8.96 -40.82 -0.37 -2.13 16 39 H 0.14 0.20 7.62 -52.49 -0.40 -0.20 16 40 H 0.40 -1.25 6.69 -40.82 -0.27 -1.53 16 41 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.13 -0.33 6.64 -52.49 -0.35 -0.68 16 44 H 0.13 -0.05 7.88 -52.49 -0.41 -0.46 16 45 H 0.48 -2.29 8.96 -340.36 -3.05 -5.34 16 46 H 0.14 0.05 7.89 -52.49 -0.41 -0.37 16 47 H 0.13 -0.34 8.05 -52.48 -0.42 -0.76 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 49 H 0.10 -0.20 6.30 -51.93 -0.33 -0.53 16 50 H 0.13 -0.39 6.36 -52.49 -0.33 -0.72 16 51 H 0.13 -0.08 8.06 -52.49 -0.42 -0.51 16 LS Contribution 431.51 15.07 6.50 6.50 Total: 0.00 -12.03 431.51 -14.45 -26.47 By element: Atomic # 1 Polarization: -9.13 SS G_CDS: -8.38 Total: -17.51 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -8.69 Total: -6.26 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: 1.73 Total: 1.47 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.37 Total: -4.00 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.24 Total: -6.67 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -12.03 -14.45 -26.47 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857820_17904044.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 203.751 kcal (2) G-P(sol) polarization free energy of solvation -12.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 191.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.471 kcal (6) G-S(sol) free energy of system = (1) + (5) 177.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds