Wall clock time and date at job start Fri Mar 5 2021 21:53:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37644 * 125.67487 * 2 1 4 4 C 1.46672 * 126.22746 * 0.02562 * 3 2 1 5 5 O 1.21697 * 119.99849 * 3.90591 * 4 3 2 6 6 N 1.34780 * 120.00144 * 183.90901 * 4 3 2 7 7 C 1.46503 * 119.99906 * 174.42571 * 6 4 3 8 8 H 1.09004 * 112.85109 * 23.80251 * 7 6 4 9 9 C 1.53784 * 113.61303 * 154.99553 * 7 6 4 10 10 C 1.53787 * 87.07630 * 89.19996 * 9 7 6 11 11 H 1.08997 * 113.61627 * 270.79880 * 10 9 7 12 12 C 1.50699 * 113.61209 * 139.98278 * 10 9 7 13 13 C 1.38319 * 119.88118 * 119.99746 * 12 10 9 14 14 C 1.38034 * 120.11536 * 179.97438 * 13 12 10 15 15 C 1.39304 * 119.87962 * 0.02562 * 14 13 12 16 16 C 1.48459 * 120.11327 * 179.97438 * 15 14 13 17 17 N 1.31814 * 126.67528 * 179.97438 * 16 15 14 18 18 N 1.28866 * 107.82198 * 179.97438 * 17 16 15 19 19 N 1.28736 * 109.31481 * 359.97438 * 18 17 16 20 20 N 1.28976 * 108.94364 * 0.02562 * 19 18 17 21 21 C 1.39296 * 119.76705 * 0.24266 * 15 14 13 22 22 C 1.38036 * 119.88311 * 359.52184 * 21 15 14 23 23 C 1.53777 * 87.08426 * 25.43219 * 10 9 7 24 24 C 1.37886 * 107.54845 * 179.75947 * 3 2 1 25 25 C 1.39877 * 107.09023 * 0.24020 * 24 3 2 26 26 Br 1.89101 * 126.07398 * 179.97438 * 25 24 3 27 27 C 1.35504 * 107.85617 * 0.02562 * 25 24 3 28 28 C 1.50702 * 125.57546 * 179.97438 * 27 25 24 29 29 O 1.42894 * 109.47191 * 242.15880 * 28 27 25 30 30 Si 1.86297 * 109.47007 * 122.15541 * 28 27 25 31 31 H 1.09002 * 109.47369 * 84.37709 * 1 2 3 32 32 H 1.08999 * 109.47056 * 204.38478 * 1 2 3 33 33 H 1.09013 * 109.47133 * 324.37975 * 1 2 3 34 34 H 0.96993 * 119.99492 * 354.42155 * 6 4 3 35 35 H 1.08999 * 113.61063 * 334.65501 * 9 7 6 36 36 H 1.08997 * 113.69067 * 203.76075 * 9 7 6 37 37 H 1.08000 * 119.94039 * 359.97438 * 13 12 10 38 38 H 1.07993 * 120.05492 * 179.97438 * 14 13 12 39 39 H 0.96996 * 125.34469 * 180.02562 * 18 17 16 40 40 H 1.07996 * 120.06022 * 179.72883 * 21 15 14 41 41 H 1.07992 * 119.94429 * 180.22644 * 22 21 15 42 42 H 1.09003 * 113.61338 * 89.11035 * 23 10 9 43 43 H 1.08997 * 113.61567 * 220.01773 * 23 10 9 44 44 H 1.07997 * 126.45485 * 180.20447 * 24 3 2 45 45 H 1.09000 * 109.46596 * 2.15536 * 28 27 25 46 46 H 0.96700 * 114.00163 * 299.99994 * 29 28 27 47 47 H 1.48506 * 109.99780 * 174.93340 * 30 28 27 48 48 H 1.48501 * 110.00377 * 296.24739 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 0.0005 5 8 0.6236 2.7640 0.0728 6 7 2.7096 3.5146 -0.0791 7 6 2.2509 4.9006 -0.2017 8 1 1.2426 5.0485 0.1850 9 6 3.2664 5.9335 0.3147 10 6 3.8548 5.9486 -1.1061 11 1 4.6362 5.2050 -1.2630 12 6 4.2510 7.3229 -1.5808 13 6 5.5652 7.5800 -1.9273 14 6 5.9334 8.8369 -2.3632 15 6 4.9787 9.8473 -2.4533 16 6 5.3691 11.2012 -2.9210 17 7 4.5773 12.2464 -3.0553 18 7 5.2915 13.2298 -3.4837 19 7 6.5106 12.8410 -3.6245 20 7 6.5955 11.5989 -3.2879 21 6 3.6578 9.5845 -2.0978 22 6 3.2993 8.3228 -1.6678 23 6 2.4687 5.5020 -1.6002 24 6 3.5781 0.6892 0.0055 25 6 3.5529 -0.7094 0.0033 26 35 5.0609 -1.8503 0.0079 27 6 2.2558 -1.1015 -0.0040 28 6 1.7713 -2.5285 -0.0093 29 8 1.0284 -2.7749 -1.2048 30 14 0.6790 -2.8188 1.4717 31 1 -0.3634 0.1007 -1.0227 32 1 -0.3633 -0.9360 0.4243 33 1 -0.3634 0.8355 0.5986 34 1 3.6592 3.3183 -0.0552 35 1 3.9492 5.5366 1.0659 36 1 2.8156 6.8807 0.6107 37 1 6.3046 6.7959 -1.8566 38 1 6.9598 9.0366 -2.6330 39 1 4.9623 14.1230 -3.6701 40 1 2.9147 10.3656 -2.1617 41 1 2.2748 8.1170 -1.3954 42 1 1.7985 6.3309 -1.8282 43 1 2.5076 4.7569 -2.3948 44 1 4.4582 1.3151 0.0101 45 1 2.6267 -3.2027 0.0324 46 1 0.2510 -2.2092 -1.3084 47 1 0.0969 -4.1838 1.4136 48 1 1.4636 -2.6542 2.7217 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857820_17904700.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 21:53:34 Heat of formation + Delta-G solvation = 170.788138 kcal Electronic energy + Delta-G solvation = -35076.449525 eV Core-core repulsion = 30184.283385 eV Total energy + Delta-G solvation = -4892.166140 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.069 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -45.49031 -42.87706 -41.42198 -40.15264 -38.77717 -37.88482 -35.52766 -35.08347 -34.54327 -34.01626 -32.21638 -31.94370 -31.37431 -30.85829 -27.54183 -27.31620 -26.61437 -26.39459 -25.77375 -24.30927 -23.60944 -23.11574 -22.18901 -21.71555 -20.65043 -20.32653 -19.91843 -18.96882 -18.17578 -18.13265 -17.91678 -17.35220 -17.08779 -16.68357 -16.49224 -16.20208 -15.99336 -15.72031 -15.52090 -15.29361 -14.88894 -14.73958 -14.50905 -14.40282 -14.32833 -14.30885 -14.22017 -14.10718 -13.69312 -13.63957 -13.38246 -13.29883 -13.17392 -13.05951 -12.91138 -12.44119 -12.38254 -12.36249 -12.11207 -12.03665 -11.91318 -11.75344 -11.45824 -11.33069 -11.14618 -11.06039 -10.84370 -10.12473 -9.88747 -9.77827 -9.43531 -9.26548 -5.20961 -0.29895 0.14543 0.16605 0.47101 0.63597 0.91909 1.19122 1.29449 1.39749 1.45034 1.54598 1.83115 2.18966 2.28762 2.67237 2.80113 3.15340 3.19061 3.41818 3.52546 3.55874 3.74015 3.75438 3.81763 3.91290 3.98225 4.06886 4.08452 4.21310 4.28464 4.34268 4.34974 4.40001 4.43146 4.49181 4.60537 4.65554 4.68550 4.78093 4.87142 4.93368 4.95251 5.00745 5.12266 5.17016 5.22932 5.27365 5.41790 5.49077 5.56076 5.57605 5.60329 5.74140 5.85122 5.97200 6.43644 6.44911 7.08467 7.09911 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.393 5.393 3 C -0.042 4.042 4 C 0.597 3.403 5 O -0.567 6.567 6 N -0.688 5.688 7 C 0.119 3.881 8 H 0.096 0.904 9 C -0.125 4.125 10 C -0.071 4.071 11 H 0.114 0.886 12 C -0.047 4.047 13 C -0.118 4.118 14 C -0.083 4.083 15 C -0.044 4.044 16 C 0.208 3.792 17 N -0.298 5.298 18 N -0.203 5.203 19 N -0.060 5.060 20 N -0.297 5.297 21 C -0.082 4.082 22 C -0.119 4.119 23 C -0.141 4.141 24 C -0.106 4.106 25 C -0.182 4.182 26 Br -0.030 7.030 27 C 0.048 3.952 28 C -0.054 4.054 29 O -0.542 6.542 30 Si 0.749 3.251 31 H 0.107 0.893 32 H 0.110 0.890 33 H 0.111 0.889 34 H 0.416 0.584 35 H 0.087 0.913 36 H 0.105 0.895 37 H 0.149 0.851 38 H 0.131 0.869 39 H 0.494 0.506 40 H 0.136 0.864 41 H 0.150 0.850 42 H 0.103 0.897 43 H 0.069 0.931 44 H 0.178 0.822 45 H 0.126 0.874 46 H 0.389 0.611 47 H -0.266 1.266 48 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.074 2.713 1.254 5.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.067 5.067 3 C -0.157 4.157 4 C 0.385 3.615 5 O -0.448 6.448 6 N -0.339 5.339 7 C 0.014 3.986 8 H 0.114 0.886 9 C -0.163 4.163 10 C -0.089 4.089 11 H 0.133 0.867 12 C -0.048 4.048 13 C -0.136 4.136 14 C -0.104 4.104 15 C -0.047 4.047 16 C -0.071 4.071 17 N -0.151 5.151 18 N -0.053 5.053 19 N -0.055 5.055 20 N -0.169 5.169 21 C -0.102 4.102 22 C -0.137 4.137 23 C -0.180 4.180 24 C -0.132 4.132 25 C -0.268 4.268 26 Br 0.054 6.946 27 C -0.074 4.074 28 C -0.164 4.164 29 O -0.348 6.348 30 Si 0.650 3.350 31 H 0.126 0.874 32 H 0.127 0.873 33 H 0.129 0.871 34 H 0.253 0.747 35 H 0.106 0.894 36 H 0.123 0.877 37 H 0.167 0.833 38 H 0.149 0.851 39 H 0.352 0.648 40 H 0.154 0.846 41 H 0.168 0.832 42 H 0.121 0.879 43 H 0.088 0.912 44 H 0.195 0.805 45 H 0.143 0.857 46 H 0.239 0.761 47 H -0.191 1.191 48 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges -4.016 2.102 1.668 4.830 hybrid contribution 0.601 0.511 -0.452 0.909 sum -3.415 2.612 1.216 4.468 Atomic orbital electron populations 1.22775 0.73736 1.05683 1.06525 1.43875 1.07887 1.03485 1.51412 1.20043 0.89927 0.87799 1.17896 1.16845 0.85521 0.83446 0.75733 1.90809 1.17129 1.84981 1.51866 1.45212 1.10072 1.05223 1.73425 1.21891 0.99639 0.79604 0.97454 0.88611 1.23399 0.97565 0.99323 0.96027 1.21697 0.97684 0.93115 0.96397 0.86744 1.20060 0.93085 0.95632 0.96014 1.21249 0.96664 0.96474 0.99234 1.21275 0.99299 0.92508 0.97285 1.17420 0.95410 0.86681 1.05208 1.24078 0.86216 0.95875 1.00960 1.74888 1.24268 0.96637 1.19289 1.47817 1.03729 1.14261 1.39537 1.78880 1.03657 1.07052 1.15932 1.76063 1.21758 1.02592 1.16493 1.21264 0.94116 0.98105 0.96704 1.21167 1.00813 0.91633 1.00067 1.23582 0.96527 1.01106 0.96761 1.21500 0.95940 0.92648 1.03157 1.20977 0.91313 0.95061 1.19412 1.96662 1.36226 1.63461 1.98252 1.20781 0.89905 0.90179 1.06501 1.24979 1.02006 0.90319 0.99101 1.86593 1.43778 1.63648 1.40828 0.94471 0.83627 0.83942 0.72941 0.87437 0.87289 0.87091 0.74662 0.89396 0.87654 0.83301 0.85070 0.64759 0.84624 0.83243 0.87899 0.91247 0.80510 0.85723 0.76071 1.19139 1.20895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.37 8.84 127.77 1.13 0.76 16 2 N -0.39 0.51 3.10 -519.59 -1.61 -1.11 16 3 C -0.04 0.01 6.89 40.35 0.28 0.29 16 4 C 0.60 0.06 7.77 86.44 0.67 0.74 16 5 O -0.57 -3.07 14.35 -4.34 -0.06 -3.13 16 6 N -0.69 3.83 5.25 -443.98 -2.33 1.50 16 7 C 0.12 -0.73 4.35 45.52 0.20 -0.53 16 8 H 0.10 -0.25 7.41 -2.39 -0.02 -0.27 16 9 C -0.13 1.14 7.29 31.12 0.23 1.36 16 10 C -0.07 0.60 3.86 -11.01 -0.04 0.56 16 11 H 0.11 -1.23 8.09 -2.39 -0.02 -1.25 16 12 C -0.05 0.22 5.29 -19.83 -0.10 0.12 16 13 C -0.12 0.36 9.69 22.24 0.22 0.57 16 14 C -0.08 -0.10 9.70 22.48 0.22 0.12 16 15 C -0.04 -0.14 5.88 -20.04 -0.12 -0.26 16 16 C 0.21 1.30 7.94 137.38 1.09 2.39 16 17 N -0.30 -1.03 12.08 -52.13 -0.63 -1.66 16 18 N -0.20 0.12 7.90 37.02 0.29 0.41 16 19 N -0.06 -0.33 13.47 37.02 0.50 0.17 16 20 N -0.30 -2.56 12.23 -52.18 -0.64 -3.20 16 21 C -0.08 0.02 9.70 22.48 0.22 0.24 16 22 C -0.12 0.47 8.59 22.24 0.19 0.66 16 23 C -0.14 0.97 7.25 31.12 0.23 1.20 16 24 C -0.11 0.10 10.34 22.58 0.23 0.34 16 25 C -0.18 -0.47 6.53 22.03 0.14 -0.33 16 26 Br -0.03 -0.10 33.05 -20.37 -0.67 -0.78 16 27 C 0.05 0.05 5.25 41.35 0.22 0.27 16 28 C -0.05 -0.01 2.88 71.24 0.20 0.20 16 29 O -0.54 0.16 12.88 -148.98 -1.92 -1.76 16 30 Si 0.75 -1.62 29.48 68.60 2.02 0.40 16 31 H 0.11 -1.07 8.14 -2.39 -0.02 -1.09 16 32 H 0.11 -1.38 3.91 -2.39 -0.01 -1.39 16 33 H 0.11 -0.56 6.56 -2.38 -0.02 -0.58 16 34 H 0.42 -4.23 7.60 -92.71 -0.70 -4.93 16 35 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 36 H 0.11 -0.98 7.72 -2.39 -0.02 -1.00 16 37 H 0.15 -1.08 8.05 -2.91 -0.02 -1.10 16 38 H 0.13 0.19 7.89 -2.91 -0.02 0.17 16 39 H 0.49 -5.03 8.96 -347.55 -3.12 -8.14 16 40 H 0.14 -0.21 7.88 -2.91 -0.02 -0.23 16 41 H 0.15 -1.21 6.65 -2.91 -0.02 -1.23 16 42 H 0.10 -0.79 6.30 -2.39 -0.02 -0.80 16 43 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.18 -1.19 7.44 -2.91 -0.02 -1.21 16 45 H 0.13 0.29 6.94 -2.39 -0.02 0.28 16 46 H 0.39 -3.34 7.19 -74.06 -0.53 -3.87 16 47 H -0.27 -0.74 7.11 99.48 0.71 -0.04 16 48 H -0.28 -1.26 7.11 99.48 0.71 -0.56 16 Total: 0.00 -25.90 419.08 -3.07 -28.98 By element: Atomic # 1 Polarization: -25.27 SS G_CDS: -3.22 Total: -28.49 kcal Atomic # 6 Polarization: 3.48 SS G_CDS: 5.20 Total: 8.68 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -4.42 Total: -3.89 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -1.98 Total: -4.89 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: 2.02 Total: 0.40 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.67 Total: -0.78 kcal Total: -25.90 -3.07 -28.98 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857820_17904700.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 199.763 kcal (2) G-P(sol) polarization free energy of solvation -25.900 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 173.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.975 kcal (6) G-S(sol) free energy of system = (1) + (5) 170.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds