Wall clock time and date at job start Fri Mar 5 2021 21:54:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38976 * 119.95587 * 2 1 4 4 O 1.35714 * 119.91413 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.17922 * 179.97438 * 3 2 1 6 6 C 1.50702 * 119.95884 * 179.97438 * 5 3 2 7 7 O 1.42895 * 109.46773 * 284.99830 * 6 5 3 8 8 Si 1.86304 * 109.46876 * 165.00001 * 6 5 3 9 9 C 1.37684 * 120.08675 * 359.74061 * 5 3 2 10 10 C 1.39757 * 119.90597 * 0.53425 * 9 5 3 11 11 C 1.47607 * 120.08667 * 179.74248 * 10 9 5 12 12 O 1.21588 * 119.99972 * 359.72885 * 11 10 9 13 13 N 1.34768 * 120.00344 * 179.72187 * 11 10 9 14 14 C 1.46497 * 120.00497 * 180.02562 * 13 11 10 15 15 H 1.08996 * 112.84970 * 23.80180 * 14 13 11 16 16 C 1.53778 * 113.62113 * 155.00144 * 14 13 11 17 17 C 1.53775 * 87.08398 * 89.19731 * 16 14 13 18 18 H 1.09002 * 113.61662 * 270.80577 * 17 16 14 19 19 C 1.50700 * 113.61537 * 139.98283 * 17 16 14 20 20 C 1.38315 * 119.87944 * 121.53056 * 19 17 16 21 21 C 1.38031 * 120.11648 * 180.02562 * 20 19 17 22 22 C 1.39304 * 119.88281 * 359.97438 * 21 20 19 23 23 C 1.48459 * 120.11865 * 179.97438 * 22 21 20 24 24 N 1.31807 * 126.67411 * 0.02562 * 23 22 21 25 25 N 1.28872 * 107.81918 * 180.02562 * 24 23 22 26 26 N 1.28731 * 109.31564 * 359.97438 * 25 24 23 27 27 N 1.28989 * 108.94441 * 359.72971 * 26 25 24 28 28 C 1.39308 * 119.76050 * 359.97438 * 22 21 20 29 29 C 1.38025 * 119.88043 * 0.02634 * 28 22 21 30 30 C 1.53780 * 87.17155 * 25.39143 * 17 16 14 31 31 C 1.37719 * 119.95925 * 180.02562 * 2 1 3 32 32 H 1.09000 * 109.46844 * 269.98183 * 1 2 3 33 33 H 1.09001 * 109.46690 * 29.97720 * 1 2 3 34 34 H 1.08993 * 109.46985 * 149.97753 * 1 2 3 35 35 H 0.96700 * 113.99925 * 89.99683 * 4 3 2 36 36 H 1.08999 * 109.47139 * 45.00068 * 6 5 3 37 37 H 0.96707 * 113.99706 * 180.02562 * 7 6 5 38 38 H 1.48496 * 109.99978 * 298.67755 * 8 6 5 39 39 H 1.48497 * 110.00106 * 60.00468 * 8 6 5 40 40 H 1.08000 * 120.05216 * 180.25391 * 9 5 3 41 41 H 0.97003 * 120.00108 * 359.97438 * 13 11 10 42 42 H 1.09011 * 113.61026 * 334.65087 * 16 14 13 43 43 H 1.08994 * 113.69727 * 203.76145 * 16 14 13 44 44 H 1.08004 * 119.94386 * 359.72512 * 20 19 17 45 45 H 1.08003 * 120.06253 * 179.97438 * 21 20 19 46 46 H 0.97002 * 125.34465 * 180.02562 * 25 24 23 47 47 H 1.08000 * 120.05332 * 179.97438 * 28 22 21 48 48 H 1.08005 * 119.93667 * 180.02562 * 29 28 22 49 49 H 1.09003 * 113.61338 * 89.15956 * 30 17 16 50 50 H 1.08997 * 113.61695 * 220.05451 * 30 17 16 51 51 H 1.07999 * 120.03890 * 0.02562 * 31 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3779 -0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3386 2.5181 0.0000 7 8 4.2726 3.1037 -1.3018 8 14 6.1197 2.2160 0.4555 9 6 4.2860 0.0209 0.0065 10 6 3.5918 -1.1921 0.0007 11 6 4.3328 -2.4687 0.0012 12 8 5.5486 -2.4659 0.0018 13 7 3.6617 -3.6374 0.0013 14 6 4.3970 -4.9044 0.0024 15 1 5.4040 -4.8090 0.4085 16 6 3.6014 -6.0780 0.5978 17 6 3.0650 -6.3316 -0.8209 18 1 2.1523 -5.7805 -1.0476 19 6 2.9705 -7.7925 -1.1784 20 6 1.7516 -8.3354 -1.5426 21 6 1.6594 -9.6730 -1.8705 22 6 2.7968 -10.4764 -1.8347 23 6 2.7035 -11.9158 -2.1858 24 7 1.6177 -12.5688 -2.5489 25 7 1.9492 -13.7949 -2.7671 26 7 3.2106 -13.9392 -2.5544 27 7 3.7084 -12.8029 -2.2011 28 6 4.0222 -9.9242 -1.4682 29 6 4.1032 -8.5855 -1.1422 30 6 4.3413 -5.6509 -1.3429 31 6 2.1947 -1.1932 -0.0005 32 1 -0.3633 -0.0003 1.0277 33 1 -0.3633 0.8902 -0.5135 34 1 -0.3633 -0.8897 -0.5142 35 1 1.3219 2.7182 0.8827 36 1 3.8876 3.1945 0.7260 37 1 4.7339 3.9504 -1.3761 38 1 6.2036 1.6366 1.8201 39 1 6.7460 1.2953 -0.5269 40 1 5.3660 0.0258 0.0110 41 1 2.6916 -3.6397 0.0013 42 1 2.8328 -5.7695 1.3066 43 1 4.2286 -6.8843 0.9780 44 1 0.8695 -7.7127 -1.5657 45 1 0.7071 -10.0961 -2.1543 46 1 1.3435 -14.4984 -3.0484 47 1 4.9070 -10.5428 -1.4385 48 1 5.0528 -8.1563 -0.8584 49 1 5.1725 -6.3396 -1.4948 50 1 4.1694 -4.9982 -2.1987 51 1 1.6547 -2.1285 -0.0014 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857820_17915012.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 21:54:01 Heat of formation + Delta-G solvation = 100.379283 kcal Electronic energy + Delta-G solvation = -36470.764633 eV Core-core repulsion = 31533.880918 eV Total energy + Delta-G solvation = -4936.883716 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.163 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -45.39993 -41.93473 -41.30325 -40.24607 -38.95690 -37.75438 -37.51078 -35.45488 -34.95730 -34.30439 -34.01978 -32.13206 -32.01470 -31.16655 -28.15025 -27.18387 -26.85050 -26.74458 -25.70101 -25.06322 -24.07240 -23.50450 -22.28807 -21.99731 -21.57742 -20.27315 -20.17334 -19.58484 -18.72042 -18.43992 -18.08368 -18.03409 -17.73502 -17.00577 -16.69723 -16.46164 -16.28334 -16.00488 -15.91834 -15.44495 -15.36369 -15.22446 -14.92185 -14.87750 -14.59809 -14.50602 -14.40637 -14.26741 -13.91824 -13.75588 -13.67919 -13.57260 -13.49890 -13.43174 -13.07921 -13.04071 -12.87522 -12.63336 -12.44540 -12.33464 -12.11165 -12.06857 -11.93652 -11.88749 -11.56697 -11.54025 -11.32597 -11.03781 -10.31289 -10.21024 -10.04290 -9.98310 -9.71021 -9.50344 -4.99165 -0.43160 -0.31171 0.00543 0.23141 0.37247 1.25484 1.29371 1.35169 1.58385 1.67944 1.93146 2.01066 2.51638 2.70226 2.72217 2.96888 3.21946 3.27510 3.32082 3.46558 3.54497 3.56087 3.61423 3.74105 3.79657 3.88782 3.91710 3.95956 4.07137 4.10068 4.24570 4.25411 4.32038 4.37868 4.43527 4.47734 4.53354 4.54705 4.56398 4.59480 4.61698 4.72594 4.82850 4.84032 4.90698 4.94123 4.99403 5.02200 5.03403 5.06081 5.21417 5.31060 5.39858 5.42006 5.44836 5.48757 5.58815 5.85149 6.34888 6.49535 6.64448 7.10116 7.19039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C 0.163 3.837 4 O -0.482 6.482 5 C -0.106 4.106 6 C -0.060 4.060 7 O -0.538 6.538 8 Si 0.676 3.324 9 C -0.053 4.053 10 C -0.139 4.139 11 C 0.565 3.435 12 O -0.530 6.530 13 N -0.708 5.708 14 C 0.118 3.882 15 H 0.108 0.892 16 C -0.134 4.134 17 C -0.077 4.077 18 H 0.099 0.901 19 C -0.050 4.050 20 C -0.118 4.118 21 C -0.076 4.076 22 C -0.023 4.023 23 C 0.218 3.782 24 N -0.294 5.294 25 N -0.226 5.226 26 N -0.046 5.046 27 N -0.268 5.268 28 C -0.071 4.071 29 C -0.119 4.119 30 C -0.144 4.144 31 C -0.065 4.065 32 H 0.074 0.926 33 H 0.078 0.922 34 H 0.071 0.929 35 H 0.393 0.607 36 H 0.073 0.927 37 H 0.382 0.618 38 H -0.252 1.252 39 H -0.244 1.244 40 H 0.139 0.861 41 H 0.401 0.599 42 H 0.078 0.922 43 H 0.102 0.898 44 H 0.129 0.871 45 H 0.133 0.867 46 H 0.477 0.523 47 H 0.137 0.863 48 H 0.132 0.868 49 H 0.099 0.901 50 H 0.076 0.924 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.258 2.652 2.751 6.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.117 4.117 3 C 0.117 3.883 4 O -0.292 6.292 5 C -0.107 4.107 6 C -0.170 4.170 7 O -0.344 6.344 8 Si 0.576 3.424 9 C -0.071 4.071 10 C -0.142 4.142 11 C 0.352 3.648 12 O -0.407 6.407 13 N -0.360 5.360 14 C 0.013 3.987 15 H 0.126 0.874 16 C -0.172 4.172 17 C -0.095 4.095 18 H 0.117 0.883 19 C -0.051 4.051 20 C -0.136 4.136 21 C -0.096 4.096 22 C -0.026 4.026 23 C -0.062 4.062 24 N -0.146 5.146 25 N -0.072 5.072 26 N -0.041 5.041 27 N -0.141 5.141 28 C -0.091 4.091 29 C -0.136 4.136 30 C -0.182 4.182 31 C -0.084 4.084 32 H 0.092 0.908 33 H 0.097 0.903 34 H 0.090 0.910 35 H 0.251 0.749 36 H 0.091 0.909 37 H 0.230 0.770 38 H -0.177 1.177 39 H -0.169 1.169 40 H 0.157 0.843 41 H 0.237 0.763 42 H 0.097 0.903 43 H 0.120 0.880 44 H 0.147 0.853 45 H 0.151 0.849 46 H 0.332 0.668 47 H 0.155 0.845 48 H 0.150 0.850 49 H 0.117 0.883 50 H 0.095 0.905 51 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -3.846 0.821 2.159 4.486 hybrid contribution -1.782 -0.318 0.273 1.831 sum -5.628 0.503 2.432 6.152 Atomic orbital electron populations 1.20737 0.89492 1.03964 1.02841 1.20214 0.97416 0.91978 1.02126 1.18282 0.88593 0.85366 0.96044 1.84787 1.75551 1.35642 1.33240 1.19672 0.93163 0.94020 1.03847 1.24457 1.09743 0.93575 0.89257 1.86539 1.79180 1.40504 1.28221 0.95445 0.78229 0.88193 0.80498 1.20986 1.00252 0.90551 0.95327 1.19762 0.93555 0.93222 1.07629 1.18113 0.87214 0.83519 0.75919 1.90816 1.13355 1.87442 1.49110 1.45547 1.10078 1.04914 1.75460 1.21927 0.97382 0.82177 0.97223 0.87383 1.23435 1.00127 0.97787 0.95888 1.21665 0.99158 0.91875 0.96848 0.88254 1.19861 0.93295 0.95040 0.96863 1.20982 0.97569 0.94711 1.00360 1.21167 0.97714 0.93417 0.97316 1.17236 0.95186 0.85457 1.04743 1.23733 0.84849 0.96865 1.00770 1.74917 1.26583 0.92717 1.20360 1.47760 1.08085 1.08307 1.43059 1.78957 0.93109 1.19008 1.13041 1.76104 1.25721 0.95172 1.17144 1.21189 0.96710 0.95213 0.96000 1.20955 0.98697 0.93042 1.00951 1.23614 0.97587 0.99180 0.97838 1.21085 0.92404 0.97907 0.97026 0.90769 0.90279 0.90978 0.74947 0.90946 0.77046 1.17669 1.16907 0.84339 0.76344 0.90328 0.87984 0.85260 0.84912 0.66848 0.84507 0.84976 0.88307 0.90487 0.84875 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.23 9.79 36.01 0.35 0.58 16 2 C -0.12 -0.02 5.89 -104.54 -0.62 -0.64 16 3 C 0.16 0.24 6.66 -39.02 -0.26 -0.02 16 4 O -0.48 -0.09 11.84 -18.85 -0.22 -0.31 16 5 C -0.11 -0.27 5.30 -104.53 -0.55 -0.83 16 6 C -0.06 -0.03 2.36 36.01 0.09 0.06 16 7 O -0.54 -0.69 12.86 -35.23 -0.45 -1.15 16 8 Si 0.68 0.04 30.18 -169.99 -5.13 -5.09 16 9 C -0.05 -0.20 8.20 -39.22 -0.32 -0.52 16 10 C -0.14 -0.34 5.87 -104.96 -0.62 -0.95 16 11 C 0.56 1.79 7.76 -12.44 -0.10 1.70 16 12 O -0.53 -3.76 15.94 5.29 0.08 -3.67 16 13 N -0.71 0.32 5.21 -53.95 -0.28 0.04 16 14 C 0.12 -0.09 4.33 -67.03 -0.29 -0.38 16 15 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 16 C -0.13 0.35 7.29 -25.92 -0.19 0.17 16 17 C -0.08 0.19 3.85 -90.96 -0.35 -0.16 16 18 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 19 C -0.05 0.05 5.29 -104.57 -0.55 -0.50 16 20 C -0.12 0.11 9.69 -39.63 -0.38 -0.28 16 21 C -0.08 -0.02 9.70 -39.26 -0.38 -0.40 16 22 C -0.02 -0.04 5.88 -104.89 -0.62 -0.65 16 23 C 0.22 0.63 7.94 -156.31 -1.24 -0.61 16 24 N -0.29 -0.51 12.08 32.17 0.39 -0.12 16 25 N -0.23 0.05 7.90 60.35 0.48 0.53 16 26 N -0.05 -0.12 13.47 60.35 0.81 0.70 16 27 N -0.27 -1.06 12.23 32.15 0.39 -0.67 16 28 C -0.07 -0.05 9.70 -39.26 -0.38 -0.43 16 29 C -0.12 0.08 8.52 -39.63 -0.34 -0.26 16 30 C -0.14 0.19 7.27 -25.83 -0.19 0.00 16 31 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 32 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.08 -0.10 7.52 -51.93 -0.39 -0.49 16 34 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 35 H 0.39 -1.79 9.06 45.56 0.41 -1.38 16 36 H 0.07 -0.13 7.82 -51.93 -0.41 -0.53 16 37 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 38 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 39 H -0.24 -0.94 6.75 56.52 0.38 -0.56 16 40 H 0.14 0.69 4.47 -52.49 -0.23 0.45 16 41 H 0.40 -1.29 6.73 -40.82 -0.27 -1.57 16 42 H 0.08 -0.25 8.14 -51.92 -0.42 -0.67 16 43 H 0.10 -0.28 7.64 -51.93 -0.40 -0.68 16 44 H 0.13 -0.36 8.05 -52.48 -0.42 -0.78 16 45 H 0.13 -0.06 7.88 -52.48 -0.41 -0.47 16 46 H 0.48 -2.33 8.96 -340.36 -3.05 -5.38 16 47 H 0.14 0.05 7.89 -52.49 -0.41 -0.36 16 48 H 0.13 -0.30 6.71 -52.48 -0.35 -0.65 16 49 H 0.10 -0.17 6.38 -51.93 -0.33 -0.50 16 50 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 51 H 0.13 -0.47 6.39 -52.49 -0.34 -0.80 16 LS Contribution 428.34 15.07 6.46 6.46 Total: 0.00 -13.55 428.34 -12.70 -26.25 By element: Atomic # 1 Polarization: -10.56 SS G_CDS: -7.92 Total: -18.48 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -7.30 Total: -4.47 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: 1.79 Total: 0.47 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.59 Total: -5.13 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.13 Total: -5.09 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -13.55 -12.70 -26.25 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857820_17915012.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 126.628 kcal (2) G-P(sol) polarization free energy of solvation -13.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.249 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds