Wall clock time and date at job start Sat Mar 6 2021 05:13:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38974 * 119.95110 * 2 1 4 4 O 1.35707 * 119.91727 * 0.25983 * 3 2 1 5 5 C 1.39025 * 120.17189 * 179.97438 * 3 2 1 6 6 C 1.50701 * 119.95425 * 180.02562 * 5 3 2 7 7 O 1.42901 * 109.47011 * 75.00129 * 6 5 3 8 8 Si 1.86292 * 109.47259 * 195.00448 * 6 5 3 9 9 C 1.37679 * 120.08812 * 0.02858 * 5 3 2 10 10 C 1.39750 * 119.91147 * 359.97438 * 9 5 3 11 11 C 1.47603 * 120.08382 * 179.97438 * 10 9 5 12 12 O 1.21585 * 120.00358 * 359.97438 * 11 10 9 13 13 N 1.34783 * 119.99864 * 180.02562 * 11 10 9 14 14 C 1.46501 * 120.00031 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84927 * 334.66983 * 14 13 11 16 16 C 1.53781 * 113.61015 * 105.86101 * 14 13 11 17 17 C 1.54059 * 86.98534 * 89.16354 * 16 14 13 18 18 H 1.09000 * 113.68716 * 270.87447 * 17 16 14 19 19 C 1.52994 * 113.62067 * 139.97273 * 17 16 14 20 20 C 1.50701 * 109.46973 * 87.50862 * 19 17 16 21 21 N 1.31036 * 126.55249 * 89.99332 * 20 19 17 22 22 N 1.28879 * 107.92077 * 180.02562 * 21 20 19 23 23 N 1.28780 * 109.09867 * 0.02562 * 22 21 20 24 24 N 1.28992 * 108.72730 * 359.72647 * 23 22 21 25 25 C 1.53780 * 113.61546 * 203.47060 * 14 13 11 26 26 C 1.37722 * 119.95607 * 179.97438 * 2 1 3 27 27 H 1.09001 * 109.46986 * 89.99987 * 1 2 3 28 28 H 1.08999 * 109.47008 * 209.99399 * 1 2 3 29 29 H 1.08993 * 109.47389 * 330.00053 * 1 2 3 30 30 H 0.96703 * 113.99181 * 269.72446 * 4 3 2 31 31 H 1.09000 * 109.47029 * 315.00241 * 6 5 3 32 32 H 0.96694 * 113.99821 * 59.99965 * 7 6 5 33 33 H 1.48497 * 110.00106 * 58.67750 * 8 6 5 34 34 H 1.48497 * 110.00142 * 180.02562 * 8 6 5 35 35 H 1.08000 * 120.04092 * 179.97438 * 9 5 3 36 36 H 0.97002 * 119.99659 * 359.97438 * 13 11 10 37 37 H 1.09001 * 113.61275 * 203.66437 * 16 14 13 38 38 H 1.08997 * 113.61956 * 334.57080 * 16 14 13 39 39 H 1.09000 * 109.47274 * 207.50418 * 19 17 16 40 40 H 1.08999 * 109.47404 * 327.50785 * 19 17 16 41 41 H 0.97000 * 125.45366 * 180.02562 * 22 21 20 42 42 H 1.08999 * 113.61170 * 25.43257 * 25 14 13 43 43 H 1.08998 * 113.61396 * 156.25575 * 25 14 13 44 44 H 1.07996 * 120.04724 * 0.04126 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 0.0053 5 6 3.5911 1.2095 0.0005 6 6 4.3386 2.5181 0.0011 7 8 4.2715 3.1043 1.3026 8 14 6.1199 2.2161 -0.4530 9 6 4.2859 0.0209 0.0005 10 6 3.5919 -1.1921 0.0004 11 6 4.3329 -2.4686 -0.0002 12 8 5.5488 -2.4657 -0.0012 13 7 3.6618 -3.6374 -0.0008 14 6 4.3972 -4.9044 -0.0020 15 1 5.3948 -4.8144 -0.4321 16 6 4.3739 -5.6314 1.3529 17 6 3.0828 -6.3191 0.8698 18 1 2.1754 -5.7643 1.1084 19 6 2.9943 -7.7970 1.2552 20 6 2.3765 -7.9230 2.6240 21 7 1.1005 -8.0448 2.8961 22 7 0.9738 -8.1242 4.1762 23 7 2.1391 -8.0550 4.7201 24 7 3.0242 -7.9362 3.7892 25 6 3.5885 -6.0856 -0.5637 26 6 2.1947 -1.1932 0.0005 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 -0.8900 0.5137 29 1 -0.3634 0.8899 0.5138 30 1 1.3225 2.7220 -0.8766 31 1 3.8880 3.1942 -0.7255 32 1 4.6550 2.5564 2.0010 33 1 6.2016 1.5773 -1.7911 34 1 6.8680 3.4988 -0.4553 35 1 5.3659 0.0259 0.0005 36 1 2.6917 -3.6396 -0.0004 37 1 5.2081 -6.3187 1.4941 38 1 4.2240 -4.9659 2.2030 39 1 2.3778 -8.3259 0.5284 40 1 3.9945 -8.2301 1.2668 41 1 0.1350 -8.2207 4.6537 42 1 2.8050 -5.7865 -1.2598 43 1 4.2084 -6.8962 -0.9469 44 1 1.6548 -2.1285 0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857870_17915012.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:04 Heat of formation + Delta-G solvation = 66.660175 kcal Electronic energy + Delta-G solvation = -29648.103135 eV Core-core repulsion = 25378.199430 eV Total energy + Delta-G solvation = -4269.903705 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.147 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -45.44066 -41.83944 -40.98453 -39.48527 -37.82938 -37.48449 -35.66165 -34.94272 -34.21179 -33.94124 -31.84754 -30.29852 -28.13078 -26.93134 -26.82621 -25.64705 -25.45505 -24.30993 -22.77299 -22.12667 -21.63882 -20.36529 -20.15111 -19.59666 -18.79470 -18.11343 -18.02466 -17.28576 -16.94492 -16.66770 -16.21225 -16.08714 -15.96937 -15.74634 -15.56019 -15.32757 -15.02769 -14.77941 -14.60368 -14.48776 -14.12779 -13.96086 -13.78991 -13.48314 -13.37876 -13.29941 -13.06629 -12.89328 -12.64197 -12.53102 -12.30530 -12.21014 -12.01901 -12.00347 -11.73051 -11.65159 -11.43814 -11.06716 -10.98037 -10.41005 -10.15704 -10.02918 -9.70226 -4.97971 -0.42354 0.02018 0.16473 1.11099 1.26736 1.34943 1.62064 1.68349 1.97468 1.97775 2.54921 2.81978 3.00397 3.24358 3.32762 3.38792 3.48124 3.49887 3.53607 3.67593 3.72935 3.78518 3.90665 4.12469 4.15058 4.23306 4.38898 4.41208 4.48386 4.49021 4.53934 4.56118 4.59944 4.63261 4.67103 4.74252 4.80043 4.94469 4.98019 5.00536 5.03426 5.05164 5.09909 5.22530 5.44344 5.45597 5.53969 6.38021 6.50887 6.58819 7.13270 7.25997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.160 3.840 4 O -0.483 6.483 5 C -0.151 4.151 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.044 4.044 10 C -0.138 4.138 11 C 0.564 3.436 12 O -0.528 6.528 13 N -0.710 5.710 14 C 0.118 3.882 15 H 0.108 0.892 16 C -0.143 4.143 17 C -0.108 4.108 18 H 0.091 0.909 19 C -0.015 4.015 20 C 0.176 3.824 21 N -0.302 5.302 22 N -0.231 5.231 23 N -0.050 5.050 24 N -0.273 5.273 25 C -0.137 4.137 26 C -0.066 4.066 27 H 0.073 0.927 28 H 0.070 0.930 29 H 0.078 0.922 30 H 0.393 0.607 31 H 0.112 0.888 32 H 0.378 0.622 33 H -0.254 1.254 34 H -0.250 1.250 35 H 0.146 0.854 36 H 0.399 0.601 37 H 0.099 0.901 38 H 0.072 0.928 39 H 0.098 0.902 40 H 0.102 0.898 41 H 0.475 0.525 42 H 0.077 0.923 43 H 0.103 0.897 44 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.031 -3.419 -2.025 6.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.114 3.886 4 O -0.294 6.294 5 C -0.152 4.152 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.063 4.063 10 C -0.141 4.141 11 C 0.351 3.649 12 O -0.404 6.404 13 N -0.361 5.361 14 C 0.013 3.987 15 H 0.126 0.874 16 C -0.182 4.182 17 C -0.127 4.127 18 H 0.109 0.891 19 C -0.056 4.056 20 C -0.106 4.106 21 N -0.154 5.154 22 N -0.077 5.077 23 N -0.046 5.046 24 N -0.146 5.146 25 C -0.175 4.175 26 C -0.085 4.085 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.097 0.903 30 H 0.251 0.749 31 H 0.129 0.871 32 H 0.225 0.775 33 H -0.178 1.178 34 H -0.174 1.174 35 H 0.163 0.837 36 H 0.235 0.765 37 H 0.118 0.882 38 H 0.090 0.910 39 H 0.117 0.883 40 H 0.121 0.879 41 H 0.329 0.671 42 H 0.096 0.904 43 H 0.122 0.878 44 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.717 -2.864 -1.711 4.994 hybrid contribution -1.902 0.033 -0.703 2.028 sum -5.619 -2.831 -2.413 6.739 Atomic orbital electron populations 1.20738 0.89737 1.03856 1.02800 1.20212 0.97309 0.92093 1.02180 1.18317 0.88824 0.85288 0.96149 1.84794 1.75625 1.35613 1.33322 1.20694 0.93921 0.96075 1.04557 1.24866 1.09380 0.92804 0.89553 1.86553 1.84560 1.46652 1.15869 0.94613 0.77300 0.83868 0.86418 1.20946 1.00024 0.90125 0.95168 1.19807 0.93437 0.93424 1.07469 1.18113 0.87257 0.83468 0.76016 1.90816 1.13179 1.87415 1.49022 1.45577 1.10043 1.05048 1.75456 1.21869 0.97182 0.82150 0.97486 0.87368 1.23575 0.97642 0.99439 0.97513 1.22667 0.98953 0.94266 0.96839 0.89093 1.20039 1.01637 0.97663 0.86214 1.25722 0.85956 1.00918 0.98037 1.74711 1.21674 1.21796 0.97241 1.47838 1.11023 1.45769 1.03056 1.79020 0.88353 1.14431 1.22775 1.75929 1.24221 1.17495 0.96919 1.23367 1.00186 0.98033 0.95883 1.21089 0.92600 0.97775 0.97050 0.90852 0.91087 0.90349 0.74947 0.87091 0.77487 1.17849 1.17409 0.83710 0.76486 0.88221 0.90950 0.88342 0.87938 0.67123 0.90397 0.87841 0.85108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.25 9.79 36.01 0.35 0.61 16 2 C -0.12 0.07 5.89 -104.54 -0.62 -0.55 16 3 C 0.16 0.08 6.66 -39.02 -0.26 -0.18 16 4 O -0.48 -0.07 11.84 -18.83 -0.22 -0.29 16 5 C -0.15 -0.09 5.27 -104.53 -0.55 -0.64 16 6 C -0.05 -0.03 2.37 36.01 0.09 0.06 16 7 O -0.53 -0.78 12.88 -35.23 -0.45 -1.23 16 8 Si 0.68 0.15 29.91 -169.99 -5.09 -4.93 16 9 C -0.04 -0.04 8.20 -39.22 -0.32 -0.36 16 10 C -0.14 -0.08 5.87 -104.96 -0.62 -0.70 16 11 C 0.56 0.90 7.76 -12.44 -0.10 0.81 16 12 O -0.53 -2.64 15.96 5.29 0.08 -2.56 16 13 N -0.71 0.89 5.21 -54.03 -0.28 0.61 16 14 C 0.12 -0.18 4.30 -67.12 -0.29 -0.47 16 15 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 16 C -0.14 0.22 7.45 -25.77 -0.19 0.03 16 17 C -0.11 0.33 3.53 -89.66 -0.32 0.01 16 18 H 0.09 -0.25 8.12 -51.93 -0.42 -0.67 16 19 C -0.02 0.04 5.68 -27.89 -0.16 -0.12 16 20 C 0.18 0.09 7.61 -156.63 -1.19 -1.10 16 21 N -0.30 -0.09 12.36 32.47 0.40 0.31 16 22 N -0.23 0.23 7.91 60.34 0.48 0.71 16 23 N -0.05 -0.09 13.48 60.35 0.81 0.72 16 24 N -0.27 -0.72 12.50 32.45 0.41 -0.32 16 25 C -0.14 0.53 7.38 -25.92 -0.19 0.34 16 26 C -0.07 0.08 9.18 -39.22 -0.36 -0.28 16 27 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 29 H 0.08 -0.10 7.52 -51.93 -0.39 -0.49 16 30 H 0.39 -1.61 9.06 45.56 0.41 -1.20 16 31 H 0.11 0.02 7.83 -51.93 -0.41 -0.38 16 32 H 0.38 -0.80 8.70 45.56 0.40 -0.40 16 33 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 34 H -0.25 -0.76 7.11 56.52 0.40 -0.35 16 35 H 0.15 0.06 4.70 -52.49 -0.25 -0.19 16 36 H 0.40 -1.44 6.73 -40.82 -0.27 -1.72 16 37 H 0.10 -0.19 7.90 -51.93 -0.41 -0.60 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.10 -0.34 7.85 -51.93 -0.41 -0.74 16 41 H 0.47 -2.48 8.96 -340.53 -3.05 -5.54 16 42 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 43 H 0.10 -0.50 8.10 -51.93 -0.42 -0.92 16 44 H 0.13 -0.52 6.39 -52.49 -0.34 -0.85 16 LS Contribution 373.22 15.07 5.62 5.62 Total: 0.00 -11.65 373.22 -10.21 -21.86 By element: Atomic # 1 Polarization: -10.72 SS G_CDS: -7.25 Total: -17.98 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -4.72 Total: -2.54 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: 1.82 Total: 2.04 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.59 Total: -4.07 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -5.09 Total: -4.93 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -11.65 -10.21 -21.86 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857870_17915012.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.524 kcal (2) G-P(sol) polarization free energy of solvation -11.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.864 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds