Wall clock time and date at job start Sat Mar 6 2021 05:13:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37931 * 120.06759 * 2 1 4 4 C 1.38387 * 120.14223 * 179.72402 * 3 2 1 5 5 C 1.50700 * 119.85722 * 180.27720 * 4 3 2 6 6 C 1.38346 * 120.28809 * 0.50713 * 4 3 2 7 7 C 1.50694 * 119.92353 * 179.76561 * 6 4 3 8 8 O 1.42899 * 109.47373 * 74.72627 * 7 6 4 9 9 Si 1.86305 * 109.47194 * 194.72591 * 7 6 4 10 10 C 1.37980 * 120.14651 * 359.49345 * 6 4 3 11 11 C 1.39562 * 119.85000 * 0.25280 * 10 6 4 12 12 C 1.47846 * 120.14025 * 179.97438 * 11 10 6 13 13 O 1.21553 * 119.99674 * 173.74816 * 12 11 10 14 14 N 1.34779 * 120.00015 * 353.73880 * 12 11 10 15 15 C 1.46498 * 119.99700 * 180.02562 * 14 12 11 16 16 H 1.08991 * 112.85340 * 25.33877 * 15 14 12 17 17 C 1.53782 * 113.61358 * 156.53312 * 15 14 12 18 18 C 1.53782 * 87.08175 * 89.11376 * 17 15 14 19 19 H 1.08997 * 113.62076 * 270.88328 * 18 17 15 20 20 C 1.53004 * 113.61274 * 140.06478 * 18 17 15 21 21 C 1.50708 * 109.46722 * 175.00386 * 20 18 17 22 22 N 1.31040 * 126.55025 * 90.00430 * 21 20 18 23 23 N 1.28881 * 107.91410 * 179.97438 * 22 21 20 24 24 N 1.28778 * 109.10484 * 359.97438 * 23 22 21 25 25 N 1.29000 * 108.72457 * 359.72266 * 24 23 22 26 26 C 1.53784 * 113.61461 * 254.13781 * 15 14 12 27 27 H 1.08995 * 109.47411 * 263.43125 * 1 2 3 28 28 H 1.08994 * 109.47261 * 23.43376 * 1 2 3 29 29 H 1.09004 * 109.46940 * 143.43422 * 1 2 3 30 30 H 1.07996 * 119.93110 * 359.97438 * 3 2 1 31 31 H 1.09004 * 109.46653 * 270.23326 * 5 4 3 32 32 H 1.08997 * 109.46855 * 30.23035 * 5 4 3 33 33 H 1.08998 * 109.47096 * 150.23064 * 5 4 3 34 34 H 1.09004 * 109.47434 * 314.72745 * 7 6 4 35 35 H 0.96696 * 114.00096 * 300.00153 * 8 7 6 36 36 H 1.48498 * 109.99782 * 298.68656 * 9 7 6 37 37 H 1.48505 * 109.99672 * 59.99872 * 9 7 6 38 38 H 1.08000 * 120.07316 * 180.27269 * 10 6 4 39 39 H 0.96998 * 119.99591 * 0.02562 * 14 12 11 40 40 H 1.08992 * 113.61592 * 203.66267 * 17 15 14 41 41 H 1.09004 * 113.61607 * 334.48563 * 17 15 14 42 42 H 1.09002 * 109.47175 * 295.00129 * 20 18 17 43 43 H 1.08990 * 109.47283 * 55.00543 * 20 18 17 44 44 H 0.97004 * 125.44641 * 179.97438 * 23 22 21 45 45 H 1.08998 * 113.61367 * 25.43659 * 26 15 14 46 46 H 1.09002 * 113.61496 * 156.33290 * 26 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1981 1.1937 0.0000 4 6 3.5820 1.1955 0.0058 5 6 4.3305 2.5035 0.0121 6 6 4.2813 0.0018 0.0010 7 6 5.7882 0.0134 0.0020 8 8 6.2610 0.3663 1.3035 9 14 6.4226 -1.6786 -0.4515 10 6 3.6021 -1.1992 0.0010 11 6 2.2065 -1.2080 0.0005 12 6 1.4722 -2.4912 -0.0001 13 8 0.2621 -2.4990 0.1141 14 7 2.1446 -3.6524 -0.1275 15 6 1.4169 -4.9238 -0.1286 16 1 0.3831 -4.8195 -0.4576 17 6 2.1734 -6.0659 -0.8273 18 6 2.8128 -6.3719 0.5375 19 1 3.7358 -5.8218 0.7205 20 6 2.9445 -7.8677 0.8310 21 6 3.6888 -8.0616 2.1270 22 7 3.1631 -8.1389 3.3248 23 7 4.1226 -8.3056 4.1689 24 7 5.2423 -8.3360 3.5336 25 7 5.0072 -8.1945 2.2731 26 6 1.5705 -5.7227 1.1765 27 1 -0.3634 -0.1176 1.0208 28 1 -0.3633 0.9428 -0.4087 29 1 -0.3633 -0.8254 -0.6123 30 1 1.6581 2.1290 -0.0004 31 1 4.5116 2.8233 -1.0141 32 1 3.7382 3.2585 0.5288 33 1 5.2830 2.3745 0.5259 34 1 6.1465 0.7426 -0.7247 35 1 5.9688 1.2372 1.6054 36 1 5.9673 -2.6767 0.5493 37 1 5.9378 -2.0572 -1.8032 38 1 4.1492 -2.1304 0.0017 39 1 3.1103 -3.6461 -0.2183 40 1 1.5234 -6.8607 -1.1929 41 1 2.8858 -5.7230 -1.5776 42 1 1.9519 -8.3108 0.9122 43 1 3.4926 -8.3499 0.0217 44 1 4.0181 -8.3940 5.1293 45 1 1.7974 -5.1027 2.0438 46 1 0.7558 -6.4238 1.3577 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857870_17915580.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:08 Heat of formation + Delta-G solvation = 104.533516 kcal Electronic energy + Delta-G solvation = -29956.039440 eV Core-core repulsion = 25850.922620 eV Total energy + Delta-G solvation = -4105.116821 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.164 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -45.41669 -41.85669 -40.78587 -39.39692 -37.63656 -35.70268 -35.01178 -34.37581 -34.29067 -33.14658 -30.57352 -29.25774 -28.62509 -26.83738 -25.70552 -25.48531 -24.97262 -23.85106 -23.01417 -22.48578 -21.08916 -20.39329 -20.00566 -18.94992 -18.35831 -18.02851 -17.23651 -16.92237 -16.53714 -16.39601 -16.25823 -16.02596 -15.56152 -15.41949 -15.15241 -15.02460 -14.90168 -14.62171 -14.52472 -14.12566 -13.87019 -13.82186 -13.53737 -13.44963 -13.10504 -12.97895 -12.83952 -12.76017 -12.71671 -12.64293 -12.48352 -12.21392 -12.19445 -11.99669 -11.70332 -11.43842 -11.33657 -11.19755 -11.04688 -10.62420 -10.14965 -9.97300 -9.65155 -4.91211 -0.30579 0.11176 0.19323 1.12563 1.26599 1.37825 1.54877 1.74629 1.84954 1.99342 2.61062 2.83681 3.24152 3.35800 3.39823 3.46509 3.49197 3.53610 3.68282 3.71243 3.73540 3.77676 4.02681 4.06431 4.16170 4.26007 4.37196 4.41407 4.43004 4.44248 4.49400 4.54815 4.63199 4.63452 4.68083 4.73088 4.78541 4.80723 4.87343 4.90022 4.96128 4.99703 5.02067 5.08487 5.22859 5.33608 5.47026 5.48132 5.56197 5.73882 6.37664 6.43030 7.14477 7.27867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.010 4.010 3 C -0.127 4.127 4 C -0.041 4.041 5 C -0.125 4.125 6 C -0.129 4.129 7 C -0.082 4.082 8 O -0.533 6.533 9 Si 0.741 3.259 10 C -0.078 4.078 11 C -0.143 4.143 12 C 0.563 3.437 13 O -0.523 6.523 14 N -0.713 5.713 15 C 0.119 3.881 16 H 0.109 0.891 17 C -0.137 4.137 18 C -0.109 4.109 19 H 0.091 0.909 20 C -0.014 4.014 21 C 0.175 3.825 22 N -0.297 5.297 23 N -0.230 5.230 24 N -0.050 5.050 25 N -0.277 5.277 26 C -0.144 4.144 27 H 0.078 0.922 28 H 0.061 0.939 29 H 0.097 0.903 30 H 0.135 0.865 31 H 0.081 0.919 32 H 0.077 0.923 33 H 0.069 0.931 34 H 0.077 0.923 35 H 0.362 0.638 36 H -0.252 1.252 37 H -0.245 1.245 38 H 0.122 0.878 39 H 0.397 0.603 40 H 0.104 0.896 41 H 0.078 0.922 42 H 0.099 0.901 43 H 0.103 0.897 44 H 0.475 0.525 45 H 0.070 0.930 46 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.846 1.446 -1.053 2.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.011 4.011 3 C -0.145 4.145 4 C -0.041 4.041 5 C -0.182 4.182 6 C -0.129 4.129 7 C -0.191 4.191 8 O -0.340 6.340 9 Si 0.639 3.361 10 C -0.096 4.096 11 C -0.146 4.146 12 C 0.352 3.648 13 O -0.400 6.400 14 N -0.364 5.364 15 C 0.014 3.986 16 H 0.127 0.873 17 C -0.175 4.175 18 C -0.129 4.129 19 H 0.110 0.890 20 C -0.055 4.055 21 C -0.107 4.107 22 N -0.149 5.149 23 N -0.076 5.076 24 N -0.046 5.046 25 N -0.150 5.150 26 C -0.182 4.182 27 H 0.097 0.903 28 H 0.080 0.920 29 H 0.115 0.885 30 H 0.153 0.847 31 H 0.100 0.900 32 H 0.096 0.904 33 H 0.088 0.912 34 H 0.095 0.905 35 H 0.212 0.788 36 H -0.177 1.177 37 H -0.169 1.169 38 H 0.139 0.861 39 H 0.232 0.768 40 H 0.123 0.877 41 H 0.097 0.903 42 H 0.117 0.883 43 H 0.121 0.879 44 H 0.329 0.671 45 H 0.088 0.912 46 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.544 -0.054 -0.896 1.786 hybrid contribution -1.083 1.139 0.727 1.732 sum 0.461 1.085 -0.169 1.191 Atomic orbital electron populations 1.21128 0.89454 1.03414 1.03952 1.20102 0.97144 0.91157 0.92683 1.21026 0.93231 0.97932 1.02319 1.20006 0.93775 0.94844 0.95498 1.20985 1.00038 0.93784 1.03370 1.20039 0.96224 0.92795 1.03867 1.25294 0.91109 1.14167 0.88513 1.86813 1.75333 1.39986 1.31904 0.92922 0.91727 0.72309 0.79106 1.21067 0.93300 0.97380 0.97843 1.19654 0.92915 0.93436 1.08606 1.18204 0.87111 0.83450 0.76059 1.90747 1.13427 1.86977 1.48841 1.45644 1.10537 1.05402 1.74823 1.21854 0.97542 0.82065 0.97153 0.87322 1.23372 0.99891 0.98055 0.96190 1.22676 0.98784 0.94268 0.97139 0.89023 1.20024 0.99823 0.97154 0.88452 1.25712 0.89031 1.01027 0.94965 1.74735 1.18621 1.21106 1.00435 1.47844 1.01560 1.45338 1.12898 1.79002 1.10740 1.14748 1.00070 1.75912 1.14766 1.17466 1.06849 1.23573 0.97890 0.99221 0.97551 0.90306 0.92009 0.88479 0.84699 0.90010 0.90435 0.91232 0.90456 0.78843 1.17702 1.16942 0.86064 0.76775 0.87728 0.90346 0.88274 0.87906 0.67099 0.91169 0.88304 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.26 8.73 36.01 0.31 0.05 16 2 C -0.01 -0.03 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.12 9.31 -39.64 -0.37 -0.49 16 4 C -0.04 -0.02 5.87 -104.53 -0.61 -0.63 16 5 C -0.13 0.29 9.27 36.01 0.33 0.63 16 6 C -0.13 -0.17 5.26 -104.68 -0.55 -0.72 16 7 C -0.08 0.01 1.96 36.00 0.07 0.08 16 8 O -0.53 -0.32 12.64 -35.23 -0.45 -0.77 16 9 Si 0.74 -0.43 30.40 -169.99 -5.17 -5.60 16 10 C -0.08 -0.17 8.13 -39.18 -0.32 -0.48 16 11 C -0.14 -0.44 5.87 -104.97 -0.62 -1.05 16 12 C 0.56 2.01 7.70 -12.33 -0.09 1.92 16 13 O -0.52 -3.05 12.97 5.32 0.07 -2.99 16 14 N -0.71 -0.82 5.21 -53.96 -0.28 -1.10 16 15 C 0.12 -0.01 4.30 -67.12 -0.29 -0.30 16 16 H 0.11 0.11 7.50 -51.93 -0.39 -0.28 16 17 C -0.14 0.33 7.38 -25.92 -0.19 0.14 16 18 C -0.11 0.16 3.52 -89.66 -0.32 -0.16 16 19 H 0.09 -0.03 8.12 -51.93 -0.42 -0.45 16 20 C -0.01 0.02 5.68 -27.88 -0.16 -0.14 16 21 C 0.18 0.27 7.61 -156.62 -1.19 -0.92 16 22 N -0.30 -0.41 12.36 32.47 0.40 0.00 16 23 N -0.23 0.01 7.91 60.34 0.48 0.49 16 24 N -0.05 -0.13 13.48 60.35 0.81 0.68 16 25 N -0.28 -0.96 12.50 32.45 0.41 -0.55 16 26 C -0.14 0.06 7.45 -25.77 -0.19 -0.13 16 27 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 28 H 0.06 0.02 8.04 -51.93 -0.42 -0.39 16 29 H 0.10 0.36 5.85 -51.93 -0.30 0.06 16 30 H 0.14 -0.14 8.06 -52.49 -0.42 -0.57 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.08 -0.24 8.08 -51.93 -0.42 -0.66 16 33 H 0.07 -0.23 4.94 -51.93 -0.26 -0.49 16 34 H 0.08 -0.14 7.39 -51.93 -0.38 -0.53 16 35 H 0.36 -0.72 6.81 45.56 0.31 -0.41 16 36 H -0.25 -0.43 6.81 56.52 0.38 -0.04 16 37 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 38 H 0.12 0.14 3.32 -52.49 -0.17 -0.03 16 39 H 0.40 -0.05 6.78 -40.82 -0.28 -0.33 16 40 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.10 -0.27 7.85 -51.93 -0.41 -0.68 16 43 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 44 H 0.47 -2.04 8.96 -340.53 -3.05 -5.10 16 45 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 46 H 0.10 -0.12 7.91 -51.93 -0.41 -0.53 16 LS Contribution 373.79 15.07 5.63 5.63 Total: 0.00 -8.84 373.79 -11.67 -20.51 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -8.78 Total: -13.45 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.80 Total: -2.85 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: 1.82 Total: -0.49 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.38 Total: -3.75 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.17 Total: -5.60 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.84 -11.67 -20.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857870_17915580.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.045 kcal (2) G-P(sol) polarization free energy of solvation -8.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.512 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds