Wall clock time and date at job start Sat Mar 6 2021 05:13:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47146 * 2 1 4 4 C 1.50695 * 109.46955 * 239.99761 * 2 1 3 5 5 C 1.34493 * 125.49428 * 150.02952 * 4 2 1 6 6 C 1.46749 * 106.37034 * 179.97438 * 5 4 2 7 7 C 1.47259 * 126.97320 * 180.02562 * 6 5 4 8 8 O 1.21626 * 120.00309 * 179.97438 * 7 6 5 9 9 N 1.34777 * 119.99668 * 359.97250 * 7 6 5 10 10 C 1.46509 * 119.99600 * 180.02562 * 9 7 6 11 11 H 1.08992 * 112.84844 * 336.19714 * 10 9 7 12 12 C 1.53784 * 113.61247 * 107.50415 * 10 9 7 13 13 C 1.53779 * 87.08002 * 89.11427 * 12 10 9 14 14 H 1.09007 * 113.69167 * 270.87186 * 13 12 10 15 15 C 1.52999 * 113.61761 * 139.98121 * 13 12 10 16 16 C 1.50698 * 109.47190 * 87.49837 * 15 13 12 17 17 N 1.31046 * 126.54510 * 90.00489 * 16 15 13 18 18 N 1.28886 * 107.91474 * 179.97438 * 17 16 15 19 19 N 1.28782 * 109.10005 * 0.02562 * 18 17 16 20 20 N 1.29000 * 108.72892 * 359.72234 * 19 18 17 21 21 C 1.53774 * 87.08298 * 25.43061 * 13 12 10 22 22 C 1.36336 * 106.05928 * 359.97438 * 6 5 4 23 23 C 1.50999 * 126.79250 * 180.02562 * 22 6 5 24 24 C 1.53398 * 108.25340 * 164.33997 * 23 22 6 25 25 C 1.53159 * 109.04505 * 48.46038 * 24 23 22 26 26 C 1.53136 * 109.52253 * 290.42233 * 25 24 23 27 27 N 1.35212 * 108.65973 * 359.78731 * 22 6 5 28 28 H 0.96706 * 114.00468 * 300.00074 * 1 2 3 29 29 H 1.09001 * 109.46621 * 119.99651 * 2 1 3 30 30 H 1.48498 * 109.99634 * 178.68087 * 3 2 1 31 31 H 1.48502 * 109.99691 * 299.99831 * 3 2 1 32 32 H 1.08004 * 126.81415 * 359.94105 * 5 4 2 33 33 H 0.96994 * 120.00366 * 0.02562 * 9 7 6 34 34 H 1.09000 * 113.61318 * 203.65964 * 12 10 9 35 35 H 1.08996 * 113.61675 * 334.56944 * 12 10 9 36 36 H 1.08999 * 109.47462 * 207.50521 * 15 13 12 37 37 H 1.09000 * 109.46739 * 327.50311 * 15 13 12 38 38 H 0.96992 * 125.45034 * 179.97438 * 18 17 16 39 39 H 1.08997 * 113.61912 * 220.01518 * 21 13 12 40 40 H 1.09005 * 113.69320 * 89.12487 * 21 13 12 41 41 H 1.09003 * 109.70743 * 284.03173 * 23 22 6 42 42 H 1.08993 * 109.70671 * 44.65230 * 23 22 6 43 43 H 1.09000 * 109.53980 * 168.32863 * 24 23 22 44 44 H 1.09000 * 109.54200 * 288.50423 * 24 23 22 45 45 H 1.08996 * 109.46470 * 50.44230 * 25 24 23 46 46 H 1.08994 * 109.46158 * 170.41213 * 25 24 23 47 47 H 1.09003 * 109.56235 * 170.83148 * 26 25 24 48 48 H 1.08995 * 109.56497 * 291.06337 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 3.0859 -0.4468 -1.8677 6 6 3.1556 -1.3783 -2.9995 7 6 4.2342 -1.4810 -3.9968 8 8 4.1618 -2.3053 -4.8882 9 7 5.3017 -0.6616 -3.9217 10 6 6.3745 -0.7635 -4.9143 11 1 6.4234 -1.7452 -5.3853 12 6 6.4009 0.4040 -5.9148 13 6 7.3186 1.1332 -4.9193 14 1 6.7798 1.7281 -4.1818 15 6 8.4576 1.9054 -5.5881 16 6 7.9841 3.2912 -5.9435 17 7 8.0549 4.3583 -5.1861 18 7 7.5481 5.3448 -5.8425 19 7 7.1581 4.9270 -6.9966 20 7 7.4183 3.6671 -7.0906 21 6 7.7341 -0.2555 -4.4060 22 6 2.0198 -2.1300 -2.9398 23 6 1.6165 -3.2358 -3.8857 24 6 0.4945 -4.0473 -3.2255 25 6 -0.5703 -3.0849 -2.6910 26 6 -0.0061 -2.3094 -1.4970 27 7 1.2911 -1.7289 -1.8739 28 1 -0.3934 0.4417 0.7651 29 1 1.7922 -0.5138 0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4678 -1.2085 32 1 3.8165 0.3023 -1.6000 33 1 5.3597 -0.0045 -3.2107 34 1 6.8879 0.1591 -6.8588 35 1 5.4325 0.8858 -6.0494 36 1 9.3017 1.9747 -4.9019 37 1 8.7674 1.3839 -6.4937 38 1 7.4718 6.2560 -5.5189 39 1 7.8420 -0.3064 -3.3226 40 1 8.5855 -0.6819 -4.9366 41 1 1.2582 -2.8067 -4.8214 42 1 2.4718 -3.8826 -4.0810 43 1 0.0461 -4.7149 -3.9612 44 1 0.9040 -4.6335 -2.4029 45 1 -0.8549 -2.3852 -3.4768 46 1 -1.4461 -3.6515 -2.3748 47 1 -0.6977 -1.5142 -1.2186 48 1 0.1304 -2.9863 -0.6538 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857870_17964112.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:26 Heat of formation + Delta-G solvation = 122.024699 kcal Electronic energy + Delta-G solvation = -32145.754463 eV Core-core repulsion = 27820.432587 eV Total energy + Delta-G solvation = -4325.321876 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.174 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -45.38509 -42.72598 -40.97869 -39.07882 -37.99362 -36.90227 -35.52271 -34.79942 -33.82977 -33.40513 -31.26159 -30.50930 -29.28668 -26.69973 -26.64765 -25.47928 -25.10472 -24.56385 -23.74359 -22.62115 -21.66397 -21.23989 -20.16708 -20.10215 -19.36593 -18.62382 -18.12373 -17.98059 -16.96182 -16.80201 -16.46919 -16.09362 -16.00846 -15.77014 -15.63577 -15.48295 -15.24787 -15.09130 -14.95249 -14.60018 -14.49094 -14.46795 -14.00298 -13.83955 -13.59365 -13.35504 -13.27124 -13.20810 -12.92750 -12.57880 -12.49403 -12.40371 -12.15029 -12.11106 -12.00848 -11.96187 -11.82462 -11.73981 -11.58231 -11.32371 -10.95099 -10.72888 -10.60969 -9.88444 -9.53232 -8.97395 -5.10115 0.21469 0.87184 0.96896 1.16771 1.37726 1.39968 1.59740 1.83783 1.98094 2.45718 2.70558 2.89018 3.01461 3.32249 3.52205 3.53452 3.55385 3.60907 3.73814 3.80427 3.81344 3.84842 3.93050 4.14898 4.24577 4.27450 4.29656 4.38254 4.43965 4.50693 4.57840 4.62585 4.64860 4.69464 4.71347 4.77251 4.77732 4.85273 4.86500 4.88922 4.97333 5.05594 5.13238 5.14301 5.19098 5.20407 5.28592 5.49435 5.71753 5.78687 6.10752 6.24064 6.38898 6.75211 7.31165 7.53617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.047 4.047 3 Si 0.708 3.292 4 C 0.037 3.963 5 C -0.178 4.178 6 C -0.235 4.235 7 C 0.598 3.402 8 O -0.545 6.545 9 N -0.712 5.712 10 C 0.122 3.878 11 H 0.107 0.893 12 C -0.144 4.144 13 C -0.107 4.107 14 H 0.090 0.910 15 C -0.015 4.015 16 C 0.178 3.822 17 N -0.303 5.303 18 N -0.231 5.231 19 N -0.051 5.051 20 N -0.273 5.273 21 C -0.137 4.137 22 C 0.122 3.878 23 C -0.055 4.055 24 C -0.129 4.129 25 C -0.139 4.139 26 C 0.102 3.898 27 N -0.421 5.421 28 H 0.387 0.613 29 H 0.078 0.922 30 H -0.254 1.254 31 H -0.253 1.253 32 H 0.143 0.857 33 H 0.398 0.602 34 H 0.098 0.902 35 H 0.070 0.930 36 H 0.098 0.902 37 H 0.102 0.898 38 H 0.474 0.526 39 H 0.076 0.924 40 H 0.101 0.899 41 H 0.089 0.911 42 H 0.101 0.899 43 H 0.080 0.920 44 H 0.068 0.932 45 H 0.074 0.926 46 H 0.089 0.911 47 H 0.113 0.887 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.379 2.138 7.636 8.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.156 4.156 3 Si 0.607 3.393 4 C -0.072 4.072 5 C -0.202 4.202 6 C -0.244 4.244 7 C 0.387 3.613 8 O -0.423 6.423 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.125 0.875 12 C -0.183 4.183 13 C -0.127 4.127 14 H 0.108 0.892 15 C -0.055 4.055 16 C -0.105 4.105 17 N -0.154 5.154 18 N -0.077 5.077 19 N -0.047 5.047 20 N -0.146 5.146 21 C -0.176 4.176 22 C 0.004 3.996 23 C -0.093 4.093 24 C -0.167 4.167 25 C -0.177 4.177 26 C -0.018 4.018 27 N -0.097 5.097 28 H 0.236 0.764 29 H 0.096 0.904 30 H -0.179 1.179 31 H -0.177 1.177 32 H 0.161 0.839 33 H 0.232 0.768 34 H 0.116 0.884 35 H 0.088 0.912 36 H 0.116 0.884 37 H 0.120 0.880 38 H 0.328 0.672 39 H 0.095 0.905 40 H 0.120 0.880 41 H 0.107 0.893 42 H 0.119 0.881 43 H 0.099 0.901 44 H 0.087 0.913 45 H 0.093 0.907 46 H 0.107 0.893 47 H 0.131 0.869 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.447 2.109 5.765 6.307 hybrid contribution 0.254 0.330 0.817 0.917 sum -1.193 2.440 6.582 7.120 Atomic orbital electron populations 1.86371 1.17468 1.81826 1.50239 1.24439 0.85335 1.10353 0.95522 0.95543 0.80801 0.75399 0.87557 1.19624 0.95014 0.94167 0.98407 1.21598 0.98350 1.02810 0.97419 1.19772 0.98227 1.04904 1.01503 1.17258 0.80693 0.79887 0.83418 1.90763 1.78922 1.36835 1.35824 1.45433 1.20803 1.38781 1.31253 1.21785 0.86421 1.00182 0.89986 0.87529 1.23529 1.00344 0.96524 0.97882 1.22603 0.96289 0.95134 0.98680 0.89208 1.20050 0.98333 0.84577 1.02575 1.25737 0.99690 0.97303 0.87788 1.74719 1.19509 0.96295 1.24911 1.47828 1.37597 1.12899 1.09403 1.79011 1.15401 1.06628 1.03630 1.75927 1.15245 1.01964 1.21425 1.23370 0.97305 0.94890 1.01989 1.20424 0.91236 0.97827 0.90099 1.20529 0.99495 0.93491 0.95785 1.21734 0.95853 0.97903 1.01197 1.21939 0.99193 0.98915 0.97605 1.22292 0.82522 0.99020 0.97997 1.43872 1.17462 1.26795 1.21559 0.76444 0.90411 1.17888 1.17735 0.83907 0.76771 0.88406 0.91153 0.88368 0.87967 0.67164 0.90484 0.88018 0.89276 0.88083 0.90131 0.91292 0.90711 0.89285 0.86929 0.90217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.99 9.97 -35.23 -0.35 0.64 16 2 C -0.05 0.04 2.99 36.00 0.11 0.15 16 3 Si 0.71 -1.24 31.23 -169.99 -5.31 -6.55 16 4 C 0.04 0.10 6.18 -81.88 -0.51 -0.41 16 5 C -0.18 -0.55 9.09 -37.47 -0.34 -0.89 16 6 C -0.23 -1.08 6.28 -103.48 -0.65 -1.73 16 7 C 0.60 3.05 7.81 -12.59 -0.10 2.95 16 8 O -0.54 -4.22 14.93 5.25 0.08 -4.14 16 9 N -0.71 -1.52 5.26 -54.14 -0.28 -1.80 16 10 C 0.12 0.12 4.33 -67.11 -0.29 -0.17 16 11 H 0.11 0.26 7.46 -51.93 -0.39 -0.13 16 12 C -0.14 -0.10 7.43 -25.92 -0.19 -0.29 16 13 C -0.11 0.10 3.51 -89.81 -0.32 -0.22 16 14 H 0.09 -0.02 8.12 -51.92 -0.42 -0.44 16 15 C -0.02 0.02 5.68 -27.88 -0.16 -0.14 16 16 C 0.18 0.34 7.61 -156.62 -1.19 -0.85 16 17 N -0.30 -0.47 12.36 32.47 0.40 -0.07 16 18 N -0.23 -0.03 7.91 60.34 0.48 0.45 16 19 N -0.05 -0.15 13.48 60.35 0.81 0.66 16 20 N -0.27 -1.07 12.50 32.45 0.41 -0.66 16 21 C -0.14 0.23 7.39 -25.92 -0.19 0.04 16 22 C 0.12 0.49 6.57 -81.64 -0.54 -0.04 16 23 C -0.06 -0.14 5.32 -27.53 -0.15 -0.29 16 24 C -0.13 0.00 5.98 -26.44 -0.16 -0.16 16 25 C -0.14 0.09 5.92 -26.58 -0.16 -0.06 16 26 C 0.10 0.03 6.21 -3.68 -0.02 0.01 16 27 N -0.42 -1.18 3.11 -107.36 -0.33 -1.52 16 28 H 0.39 -2.60 8.74 45.56 0.40 -2.20 16 29 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 30 H -0.25 -0.06 6.88 56.52 0.39 0.33 16 31 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 32 H 0.14 0.19 6.37 -52.48 -0.33 -0.14 16 33 H 0.40 0.17 7.83 -40.82 -0.32 -0.15 16 34 H 0.10 0.01 7.90 -51.93 -0.41 -0.40 16 35 H 0.07 0.20 8.14 -51.93 -0.42 -0.23 16 36 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.10 -0.19 7.84 -51.93 -0.41 -0.60 16 38 H 0.47 -2.02 8.96 -340.53 -3.05 -5.07 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 41 H 0.09 0.25 8.14 -51.93 -0.42 -0.18 16 42 H 0.10 0.35 7.40 -51.93 -0.38 -0.03 16 43 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 44 H 0.07 0.01 8.12 -51.93 -0.42 -0.42 16 45 H 0.07 0.01 8.11 -51.93 -0.42 -0.41 16 46 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 47 H 0.11 0.02 5.94 -51.93 -0.31 -0.29 16 48 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 388.89 15.07 5.86 5.86 Total: 0.00 -11.40 388.89 -12.56 -23.96 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -9.47 Total: -14.72 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -4.85 Total: -2.11 kcal Atomic # 7 Polarization: -4.42 SS G_CDS: 1.48 Total: -2.94 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.27 Total: -3.50 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.31 Total: -6.55 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.40 -12.56 -23.96 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857870_17964112.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.985 kcal (2) G-P(sol) polarization free energy of solvation -11.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 134.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.961 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds