Wall clock time and date at job start Sat Mar 6 2021 05:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47118 * 2 1 4 4 C 1.50701 * 109.47252 * 120.00310 * 2 1 3 5 5 C 1.31113 * 118.54234 * 250.02091 * 4 2 1 6 6 N 1.38929 * 121.84626 * 179.57076 * 5 4 2 7 7 C 1.47034 * 118.88292 * 13.31587 * 6 5 4 8 8 C 1.50696 * 109.82077 * 196.79702 * 7 6 5 9 9 O 1.21281 * 120.00153 * 18.20599 * 8 7 6 10 10 N 1.34781 * 119.99969 * 198.20589 * 8 7 6 11 11 C 1.46502 * 120.00001 * 179.97438 * 10 8 7 12 12 H 1.09004 * 112.84834 * 336.19720 * 11 10 8 13 13 C 1.53780 * 113.68698 * 107.46713 * 11 10 8 14 14 C 1.53779 * 87.08041 * 89.12724 * 13 11 10 15 15 H 1.08997 * 113.68936 * 270.86624 * 14 13 11 16 16 C 1.53003 * 113.61464 * 139.97905 * 14 13 11 17 17 C 1.50702 * 109.47210 * 87.49931 * 16 14 13 18 18 N 1.31036 * 126.55067 * 270.00366 * 17 16 14 19 19 N 1.28885 * 107.91643 * 180.02562 * 18 17 16 20 20 N 1.28784 * 109.09989 * 359.97438 * 19 18 17 21 21 N 1.28992 * 108.72547 * 0.02562 * 20 19 18 22 22 C 1.53777 * 87.08262 * 25.43260 * 14 13 11 23 23 C 1.53541 * 107.65396 * 316.33451 * 7 6 5 24 24 C 1.50203 * 118.54940 * 69.99552 * 4 2 1 25 25 H 0.96704 * 113.99519 * 299.99710 * 1 2 3 26 26 H 1.09002 * 109.46563 * 240.00178 * 2 1 3 27 27 H 1.48506 * 110.00009 * 300.00035 * 3 2 1 28 28 H 1.48498 * 110.00270 * 61.32263 * 3 2 1 29 29 H 1.07992 * 119.08014 * 359.59157 * 5 4 2 30 30 H 0.96997 * 120.56020 * 193.33730 * 6 5 4 31 31 H 1.08995 * 109.87029 * 75.90183 * 7 6 5 32 32 H 0.96996 * 119.99970 * 0.02562 * 10 8 7 33 33 H 1.08996 * 113.61622 * 334.57807 * 13 11 10 34 34 H 1.09006 * 113.61031 * 203.67542 * 13 11 10 35 35 H 1.08997 * 109.47017 * 327.50396 * 16 14 13 36 36 H 1.08997 * 109.47195 * 207.49947 * 16 14 13 37 37 H 0.96998 * 125.44669 * 180.26522 * 19 18 17 38 38 H 1.08990 * 113.61869 * 89.11517 * 22 14 13 39 39 H 1.09003 * 113.61350 * 219.93881 * 22 14 13 40 40 H 1.09005 * 109.61918 * 180.67083 * 23 7 6 41 41 H 1.08995 * 109.62437 * 301.04030 * 23 7 6 42 42 H 1.09000 * 109.32980 * 79.81461 * 24 4 2 43 43 H 1.09000 * 109.18808 * 320.25126 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.5112 -0.0028 2.1696 6 7 2.9915 -0.5857 3.3356 7 6 3.1169 -2.0493 3.3985 8 6 3.2500 -2.4896 4.8336 9 8 2.9186 -1.7431 5.7301 10 7 3.7373 -3.7130 5.1207 11 6 3.8672 -4.1408 6.5158 12 1 3.9436 -3.3037 7.2099 13 6 2.8326 -5.1977 6.9368 14 6 3.8396 -6.2586 6.4622 15 1 3.7354 -6.5214 5.4095 16 6 3.9156 -7.4837 7.3757 17 6 2.8766 -8.4903 6.9534 18 7 1.6429 -8.5675 7.3881 19 7 1.0733 -9.5574 6.7907 20 7 1.9172 -10.1076 5.9884 21 7 3.0373 -9.4726 6.0665 22 6 4.9412 -5.2201 6.7318 23 6 1.8453 -2.6524 2.7847 24 6 1.7451 -2.1978 1.3269 25 1 -0.3933 0.4417 0.7651 26 1 1.7922 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 2.6182 1.0631 2.0331 30 1 3.2397 -0.0364 4.0956 31 1 3.9899 -2.3711 2.8308 32 1 4.0027 -4.3099 4.4037 33 1 1.9163 -5.1709 6.3472 34 1 2.6458 -5.2224 8.0105 35 1 3.7300 -7.1806 8.4061 36 1 4.9066 -7.9314 7.3014 37 1 0.1546 -9.8399 6.9211 38 1 5.3309 -5.2508 7.7492 39 1 5.7279 -5.2121 5.9773 40 1 1.8994 -3.7403 2.8259 41 1 0.9723 -2.3081 3.3391 42 1 2.5160 -2.6968 0.7395 43 1 0.7638 -2.4622 0.9330 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857870_17980846.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:13:38 Heat of formation + Delta-G solvation = 103.665991 kcal Electronic energy + Delta-G solvation = -26694.545353 eV Core-core repulsion = 22780.417284 eV Total energy + Delta-G solvation = -3914.128069 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.159 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -45.45726 -41.70135 -40.41871 -39.14209 -37.39688 -35.68893 -34.97416 -34.17498 -33.23841 -32.87569 -30.49676 -27.61965 -26.88177 -25.60416 -25.49254 -24.90874 -23.72188 -22.80356 -22.01995 -20.51330 -20.05581 -19.46387 -19.11064 -18.18026 -18.01800 -17.32390 -16.80831 -16.67087 -16.23782 -16.01989 -15.71584 -15.65344 -15.26108 -15.17724 -15.17100 -14.88919 -14.42956 -14.14895 -13.93004 -13.83644 -13.58750 -13.15802 -13.11372 -12.89709 -12.81040 -12.55294 -12.25653 -12.23668 -12.03851 -11.99242 -11.75333 -11.63256 -11.48626 -11.26265 -11.09397 -10.87898 -10.27904 -10.20097 -8.50126 -4.89507 0.15311 1.08693 1.31079 1.33892 1.40173 1.45299 1.62550 1.77771 2.05180 2.57242 2.79652 3.20476 3.33459 3.41386 3.48454 3.58486 3.65120 3.69104 3.73623 3.81752 3.95873 4.12511 4.24836 4.32955 4.36809 4.45576 4.50335 4.53847 4.59207 4.63288 4.64524 4.70654 4.74629 4.76188 4.90329 4.94619 4.99484 5.03898 5.13806 5.25629 5.43069 5.44072 5.53779 6.16844 6.34141 6.59796 6.79299 7.02651 7.23983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.050 4.050 3 Si 0.667 3.333 4 C -0.276 4.276 5 C 0.138 3.862 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.515 3.485 9 O -0.529 6.529 10 N -0.709 5.709 11 C 0.118 3.882 12 H 0.106 0.894 13 C -0.144 4.144 14 C -0.107 4.107 15 H 0.094 0.906 16 C -0.015 4.015 17 C 0.176 3.824 18 N -0.298 5.298 19 N -0.230 5.230 20 N -0.050 5.050 21 N -0.277 5.277 22 C -0.136 4.136 23 C -0.126 4.126 24 C -0.054 4.054 25 H 0.372 0.628 26 H 0.109 0.891 27 H -0.261 1.261 28 H -0.264 1.264 29 H 0.135 0.865 30 H 0.409 0.591 31 H 0.093 0.907 32 H 0.403 0.597 33 H 0.069 0.931 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.102 0.898 37 H 0.475 0.525 38 H 0.102 0.898 39 H 0.080 0.920 40 H 0.077 0.923 41 H 0.074 0.926 42 H 0.068 0.932 43 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.277 -2.076 1.437 4.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.161 4.161 3 Si 0.570 3.430 4 C -0.286 4.286 5 C 0.018 3.982 6 N -0.364 5.364 7 C 0.027 3.973 8 C 0.301 3.699 9 O -0.404 6.404 10 N -0.360 5.360 11 C 0.013 3.987 12 H 0.124 0.876 13 C -0.183 4.183 14 C -0.127 4.127 15 H 0.112 0.888 16 C -0.056 4.056 17 C -0.107 4.107 18 N -0.149 5.149 19 N -0.076 5.076 20 N -0.046 5.046 21 N -0.150 5.150 22 C -0.174 4.174 23 C -0.165 4.165 24 C -0.091 4.091 25 H 0.220 0.780 26 H 0.126 0.874 27 H -0.186 1.186 28 H -0.190 1.190 29 H 0.152 0.848 30 H 0.246 0.754 31 H 0.111 0.889 32 H 0.238 0.762 33 H 0.088 0.912 34 H 0.115 0.885 35 H 0.116 0.884 36 H 0.121 0.879 37 H 0.329 0.671 38 H 0.121 0.879 39 H 0.098 0.902 40 H 0.096 0.904 41 H 0.093 0.907 42 H 0.087 0.913 43 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.749 -1.625 1.195 3.410 hybrid contribution -1.432 -0.194 0.807 1.655 sum 1.317 -1.818 2.002 3.008 Atomic orbital electron populations 1.86572 1.18710 1.79833 1.49122 1.24675 0.83308 1.09332 0.98822 0.95409 0.92187 0.75684 0.79685 1.20906 1.11110 0.96792 0.99767 1.20507 0.94094 0.96870 0.86758 1.44278 1.72532 1.04080 1.15472 1.20997 1.00141 0.83561 0.92615 1.20624 0.76586 0.81617 0.91097 1.90740 1.48129 1.53274 1.48232 1.45613 1.65542 1.16567 1.08293 1.21854 0.96668 0.97032 0.83178 0.87556 1.23524 0.97616 0.94736 1.02410 1.22621 0.97568 0.92601 0.99877 0.88770 1.20035 0.94562 0.90656 1.00302 1.25717 0.92121 0.97890 0.94987 1.74738 1.09742 1.08797 1.21659 1.47853 1.15789 1.18450 1.25554 1.79009 0.94987 1.19264 1.11316 1.75912 1.14750 1.06567 1.17786 1.23364 0.96431 0.93848 1.03789 1.21857 0.96634 1.00382 0.97602 1.19965 1.02549 0.92104 0.94513 0.78039 0.87356 1.18614 1.19010 0.84844 0.75382 0.88907 0.76177 0.91189 0.88475 0.88359 0.87922 0.67094 0.87949 0.90171 0.90434 0.90708 0.91315 0.90435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.14 12.88 -35.23 -0.45 -1.59 16 2 C -0.05 -0.01 2.81 36.01 0.10 0.09 16 3 Si 0.67 -0.26 29.95 -169.99 -5.09 -5.36 16 4 C -0.28 0.01 5.37 -101.34 -0.54 -0.53 16 5 C 0.14 -0.04 9.62 -16.08 -0.15 -0.20 16 6 N -0.73 0.09 5.47 -55.34 -0.30 -0.21 16 7 C 0.14 -0.16 3.36 -68.51 -0.23 -0.39 16 8 C 0.52 0.10 7.10 -10.99 -0.08 0.02 16 9 O -0.53 -2.19 15.66 5.56 0.09 -2.10 16 10 N -0.71 1.66 5.27 -53.02 -0.28 1.38 16 11 C 0.12 -0.25 4.32 -67.12 -0.29 -0.54 16 12 H 0.11 -0.04 7.46 -51.93 -0.39 -0.43 16 13 C -0.14 0.31 7.43 -25.92 -0.19 0.12 16 14 C -0.11 0.35 3.52 -89.81 -0.32 0.04 16 15 H 0.09 -0.26 8.12 -51.93 -0.42 -0.68 16 16 C -0.02 0.04 5.68 -27.88 -0.16 -0.12 16 17 C 0.18 0.08 7.61 -156.63 -1.19 -1.12 16 18 N -0.30 -0.12 12.36 32.46 0.40 0.28 16 19 N -0.23 0.22 7.91 60.34 0.48 0.69 16 20 N -0.05 -0.09 13.48 60.35 0.81 0.73 16 21 N -0.28 -0.67 12.50 32.44 0.41 -0.27 16 22 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 23 C -0.13 0.13 5.47 -26.43 -0.14 -0.01 16 24 C -0.05 0.03 5.85 -28.11 -0.16 -0.14 16 25 H 0.37 -0.16 8.70 45.56 0.40 0.24 16 26 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 27 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 28 H -0.26 -0.40 6.84 56.52 0.39 -0.01 16 29 H 0.13 -0.18 4.30 -52.49 -0.23 -0.41 16 30 H 0.41 0.06 8.08 -40.82 -0.33 -0.27 16 31 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 32 H 0.40 -1.87 8.70 -40.82 -0.36 -2.22 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.10 -0.23 7.90 -51.93 -0.41 -0.64 16 35 H 0.10 -0.36 7.84 -51.93 -0.41 -0.77 16 36 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 37 H 0.47 -2.41 8.96 -340.53 -3.05 -5.46 16 38 H 0.10 -0.51 8.10 -51.93 -0.42 -0.93 16 39 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 356.22 15.07 5.37 5.37 Total: 0.00 -9.80 356.22 -10.75 -20.55 By element: Atomic # 1 Polarization: -8.45 SS G_CDS: -8.62 Total: -17.07 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -3.55 Total: -2.41 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: 1.52 Total: 2.61 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.37 Total: -3.69 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.09 Total: -5.36 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.80 -10.75 -20.55 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857870_17980846.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.217 kcal (2) G-P(sol) polarization free energy of solvation -9.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.551 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds