Wall clock time and date at job start Sat Mar 6 2021 06:02:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37786 * 119.85114 * 2 1 4 4 C 1.39705 * 119.90585 * 179.97438 * 3 2 1 5 5 C 1.47548 * 120.18681 * 179.97438 * 4 3 2 6 6 O 1.21581 * 119.99597 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99861 * 359.97438 * 5 4 3 8 8 C 1.46500 * 119.99501 * 179.97438 * 7 5 4 9 9 H 1.08995 * 112.85328 * 336.20118 * 8 7 5 10 10 C 1.53784 * 113.61217 * 107.50515 * 8 7 5 11 11 C 1.53784 * 87.08147 * 139.97819 * 10 8 7 12 12 H 1.08995 * 113.61142 * 89.11815 * 11 10 8 13 13 C 1.53001 * 113.61677 * 220.02149 * 11 10 8 14 14 C 1.50695 * 109.46863 * 272.49804 * 13 11 10 15 15 N 1.31045 * 126.55331 * 269.71358 * 14 13 11 16 16 N 1.28877 * 107.92232 * 179.83861 * 15 14 13 17 17 N 1.28791 * 109.09804 * 0.43553 * 16 15 14 18 18 N 1.28999 * 108.72408 * 359.72822 * 17 16 15 19 19 C 1.53778 * 113.61493 * 205.00010 * 8 7 5 20 20 C 1.40131 * 119.62251 * 359.97438 * 4 3 2 21 21 O 1.35656 * 120.15362 * 179.97438 * 20 4 3 22 22 C 1.38714 * 119.69743 * 0.02562 * 20 4 3 23 23 C 1.50696 * 119.95799 * 179.97438 * 22 20 4 24 24 O 1.42909 * 109.47031 * 74.99777 * 23 22 20 25 25 Si 1.86300 * 109.47380 * 194.99868 * 23 22 20 26 26 C 1.38051 * 120.08468 * 359.97438 * 22 20 4 27 27 H 1.08994 * 109.46950 * 270.02114 * 1 2 3 28 28 H 1.08999 * 109.46503 * 30.02978 * 1 2 3 29 29 H 1.09006 * 109.46748 * 150.02164 * 1 2 3 30 30 H 1.07996 * 120.04275 * 359.95110 * 3 2 1 31 31 H 0.96998 * 120.00161 * 0.02562 * 7 5 4 32 32 H 1.08995 * 113.61951 * 254.53418 * 10 8 7 33 33 H 1.09006 * 113.61215 * 25.43675 * 10 8 7 34 34 H 1.08998 * 109.46903 * 32.49558 * 13 11 10 35 35 H 1.08997 * 109.47187 * 152.50086 * 13 11 10 36 36 H 0.96991 * 125.45570 * 180.18555 * 16 15 14 37 37 H 1.09006 * 113.61259 * 334.57410 * 19 8 7 38 38 H 1.09004 * 113.61446 * 105.47191 * 19 8 7 39 39 H 0.96696 * 113.99841 * 90.00086 * 21 20 4 40 40 H 1.09007 * 109.47462 * 315.00194 * 23 22 20 41 41 H 0.96697 * 113.99627 * 60.00320 * 24 23 22 42 42 H 1.48501 * 110.00073 * 180.02562 * 25 23 22 43 43 H 1.48502 * 109.99801 * 301.32338 * 25 23 22 44 44 H 1.07997 * 119.80544 * 180.27727 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 0.0005 5 6 4.3306 2.4725 0.0000 6 8 5.5464 2.4696 0.0009 7 7 3.6594 3.6412 -0.0016 8 6 4.3949 4.9082 -0.0016 9 1 5.4018 4.8132 0.4049 10 6 4.3392 5.6528 -1.3460 11 6 4.1901 6.9491 -0.5322 12 1 5.1415 7.4129 -0.2718 13 6 3.1900 7.9387 -1.1335 14 6 3.8938 8.8189 -2.1338 15 7 4.4769 9.9667 -1.8892 16 7 4.9648 10.4078 -2.9975 17 7 4.6963 9.5708 -3.9389 18 7 4.0373 8.5815 -3.4378 19 6 3.5991 6.0824 0.5922 20 6 4.2838 -0.0211 0.0016 21 8 5.6403 -0.0324 0.0016 22 6 3.5771 -1.2148 0.0016 23 6 4.3173 -2.5274 0.0022 24 8 4.8545 -2.7708 1.3039 25 14 3.1446 -3.9018 -0.4525 26 6 2.1967 -1.2017 0.0011 27 1 -0.3633 0.0004 1.0276 28 1 -0.3632 0.8897 -0.5143 29 1 -0.3633 -0.8902 -0.5135 30 1 1.6512 2.1293 -0.0008 31 1 2.6894 3.6434 -0.0020 32 1 5.2677 5.5982 -1.9143 33 1 3.4609 5.4093 -1.9439 34 1 2.3906 7.3899 -1.6314 35 1 2.7678 8.5557 -0.3403 36 1 5.4527 11.2390 -3.1062 37 1 2.5185 5.9563 0.5241 38 1 3.9302 6.3748 1.5887 39 1 6.0335 -0.0349 0.8850 40 1 5.1291 -2.4872 -0.7242 41 1 4.1872 -2.8192 2.0020 42 1 3.8624 -5.2019 -0.4549 43 1 2.0164 -3.9467 0.5120 44 1 1.6510 -2.1337 0.0056 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857876_17914554.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:02:40 Heat of formation + Delta-G solvation = 61.773418 kcal Electronic energy + Delta-G solvation = -29488.260292 eV Core-core repulsion = 25218.144681 eV Total energy + Delta-G solvation = -4270.115611 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.147 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -45.45874 -41.80491 -40.70495 -39.29475 -38.02827 -37.74987 -35.63748 -34.99908 -34.26365 -33.04824 -32.61022 -30.26295 -27.51985 -26.76942 -26.66844 -25.88920 -25.53701 -24.17228 -22.60762 -21.97465 -21.51757 -20.54358 -20.12769 -19.60093 -18.39490 -18.08849 -17.97334 -17.47723 -17.01422 -16.74020 -16.31660 -16.04246 -15.93599 -15.80698 -15.64846 -15.08195 -14.97766 -14.84320 -14.43197 -14.27749 -14.17063 -13.59584 -13.54907 -13.36987 -13.31720 -13.25608 -12.90034 -12.68516 -12.51797 -12.32460 -12.21441 -12.20568 -11.99980 -11.97850 -11.78958 -11.69463 -11.33971 -11.11566 -10.94581 -10.52647 -10.22248 -9.94896 -9.47744 -4.93622 -0.32523 0.08768 0.13338 1.07659 1.25696 1.51190 1.53507 1.72832 1.92595 2.12546 2.56585 2.90834 3.20353 3.32085 3.37759 3.51191 3.52394 3.60653 3.63417 3.79653 3.85606 3.89562 4.14528 4.21005 4.30353 4.36732 4.46502 4.57213 4.57436 4.63999 4.65235 4.77496 4.82273 4.85817 4.88534 4.92915 4.97647 5.00348 5.08517 5.14644 5.20692 5.28007 5.30682 5.45283 5.60636 5.63232 5.70720 6.46975 6.51667 6.70041 7.20282 7.22317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.093 4.093 3 C -0.059 4.059 4 C -0.180 4.180 5 C 0.554 3.446 6 O -0.569 6.569 7 N -0.700 5.700 8 C 0.114 3.886 9 H 0.088 0.912 10 C -0.145 4.145 11 C -0.096 4.096 12 H 0.084 0.916 13 C -0.010 4.010 14 C 0.171 3.829 15 N -0.309 5.309 16 N -0.211 5.211 17 N -0.071 5.071 18 N -0.303 5.303 19 C -0.115 4.115 20 C 0.160 3.840 21 O -0.494 6.494 22 C -0.153 4.153 23 C -0.085 4.085 24 O -0.547 6.547 25 Si 0.778 3.222 26 C -0.081 4.081 27 H 0.082 0.918 28 H 0.086 0.914 29 H 0.080 0.920 30 H 0.163 0.837 31 H 0.416 0.584 32 H 0.043 0.957 33 H 0.102 0.898 34 H 0.115 0.885 35 H 0.119 0.881 36 H 0.490 0.510 37 H 0.121 0.879 38 H 0.087 0.913 39 H 0.400 0.600 40 H 0.106 0.894 41 H 0.386 0.614 42 H -0.305 1.305 43 H -0.259 1.259 44 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.034 3.047 2.580 10.799 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.093 4.093 3 C -0.077 4.077 4 C -0.183 4.183 5 C 0.342 3.658 6 O -0.449 6.449 7 N -0.352 5.352 8 C 0.009 3.991 9 H 0.106 0.894 10 C -0.184 4.184 11 C -0.116 4.116 12 H 0.103 0.897 13 C -0.050 4.050 14 C -0.111 4.111 15 N -0.162 5.162 16 N -0.061 5.061 17 N -0.066 5.066 18 N -0.176 5.176 19 C -0.153 4.153 20 C 0.114 3.886 21 O -0.306 6.306 22 C -0.154 4.154 23 C -0.193 4.193 24 O -0.355 6.355 25 Si 0.682 3.318 26 C -0.098 4.098 27 H 0.101 0.899 28 H 0.105 0.895 29 H 0.099 0.901 30 H 0.181 0.819 31 H 0.255 0.745 32 H 0.062 0.938 33 H 0.120 0.880 34 H 0.134 0.866 35 H 0.137 0.863 36 H 0.347 0.653 37 H 0.139 0.861 38 H 0.106 0.894 39 H 0.259 0.741 40 H 0.124 0.876 41 H 0.235 0.765 42 H -0.233 1.233 43 H -0.184 1.184 44 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -8.851 2.496 1.319 9.290 hybrid contribution 1.022 0.701 1.734 2.131 sum -7.828 3.197 3.053 8.990 Atomic orbital electron populations 1.20927 0.87923 1.04791 1.03739 1.20130 0.98139 0.91708 0.99335 1.21448 0.90809 1.00006 0.95476 1.20440 0.95177 0.92480 1.10243 1.18409 0.86924 0.84656 0.75813 1.90805 1.15261 1.87995 1.50836 1.45752 1.10782 1.04401 1.74250 1.22506 0.97158 0.81669 0.97740 0.89360 1.23580 1.02555 0.95526 0.96713 1.22212 0.99084 0.93295 0.96999 0.89721 1.20180 0.96318 0.94377 0.94114 1.26293 0.99832 0.92413 0.92591 1.74706 1.15648 1.14155 1.11660 1.47897 1.36024 1.20532 1.01679 1.78955 1.12363 0.97372 1.17932 1.75892 1.15050 1.17595 1.09028 1.23342 1.01800 0.91731 0.98424 1.18590 0.83474 0.90995 0.95580 1.84659 1.15636 1.96093 1.34173 1.20620 0.94652 0.94917 1.05237 1.25263 1.05965 1.00248 0.87835 1.86604 1.38096 1.93657 1.17149 0.93827 0.76095 0.73045 0.88868 1.21414 0.92124 0.99845 0.96453 0.89919 0.89543 0.90067 0.81931 0.74529 0.93804 0.87990 0.86644 0.86266 0.65254 0.86101 0.89447 0.74071 0.87570 0.76478 1.23303 1.18425 0.82864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.25 10.00 71.24 0.71 1.96 16 2 C -0.09 0.49 5.87 -19.89 -0.12 0.37 16 3 C -0.06 0.24 9.18 22.52 0.21 0.45 16 4 C -0.18 -0.66 5.89 -20.01 -0.12 -0.77 16 5 C 0.55 3.89 7.76 86.70 0.67 4.57 16 6 O -0.57 -9.42 14.76 16.95 0.25 -9.17 16 7 N -0.70 0.97 5.31 -443.20 -2.35 -1.39 16 8 C 0.11 -0.09 4.24 45.52 0.19 0.10 16 9 H 0.09 0.46 7.46 -2.39 -0.02 0.45 16 10 C -0.14 0.10 7.43 31.12 0.23 0.33 16 11 C -0.10 0.44 3.64 -10.27 -0.04 0.40 16 12 H 0.08 -0.15 8.12 -2.39 -0.02 -0.17 16 13 C -0.01 0.06 5.68 29.85 0.17 0.23 16 14 C 0.17 0.33 7.61 138.55 1.05 1.38 16 15 N -0.31 -0.49 12.36 -51.20 -0.63 -1.13 16 16 N -0.21 0.17 7.91 37.00 0.29 0.46 16 17 N -0.07 -0.37 13.48 37.02 0.50 0.13 16 18 N -0.30 -2.04 12.50 -51.26 -0.64 -2.68 16 19 C -0.12 0.94 7.39 31.12 0.23 1.17 16 20 C 0.16 1.06 6.69 22.84 0.15 1.21 16 21 O -0.49 -5.46 10.91 -68.79 -0.75 -6.21 16 22 C -0.15 -0.27 5.27 -19.80 -0.10 -0.37 16 23 C -0.09 -0.17 2.38 71.23 0.17 0.00 16 24 O -0.55 -2.07 12.88 -148.98 -1.92 -3.99 16 25 Si 0.78 -1.82 30.25 68.60 2.07 0.26 16 26 C -0.08 0.26 8.30 22.30 0.19 0.44 16 27 H 0.08 -0.95 8.14 -2.39 -0.02 -0.97 16 28 H 0.09 -1.11 8.08 -2.39 -0.02 -1.13 16 29 H 0.08 -0.94 8.08 -2.38 -0.02 -0.96 16 30 H 0.16 -1.87 6.40 -2.91 -0.02 -1.89 16 31 H 0.42 -3.72 6.76 -92.71 -0.63 -4.34 16 32 H 0.04 0.23 8.14 -2.39 -0.02 0.21 16 33 H 0.10 -0.29 7.90 -2.38 -0.02 -0.31 16 34 H 0.12 -0.98 7.84 -2.39 -0.02 -1.00 16 35 H 0.12 -1.12 8.14 -2.39 -0.02 -1.14 16 36 H 0.49 -4.64 8.96 -347.68 -3.12 -7.76 16 37 H 0.12 -1.63 8.08 -2.38 -0.02 -1.65 16 38 H 0.09 -0.73 8.14 -2.38 -0.02 -0.75 16 39 H 0.40 2.69 9.06 -74.06 -0.67 2.02 16 40 H 0.11 0.50 7.83 -2.38 -0.02 0.48 16 41 H 0.39 -1.27 8.70 -74.06 -0.64 -1.91 16 42 H -0.30 -1.85 7.11 99.48 0.71 -1.14 16 43 H -0.26 0.58 6.68 99.48 0.66 1.24 16 44 H 0.15 -1.10 4.83 -2.91 -0.01 -1.11 16 Total: 0.00 -30.56 372.15 -3.52 -34.09 By element: Atomic # 1 Polarization: -17.89 SS G_CDS: -3.95 Total: -21.84 kcal Atomic # 6 Polarization: 7.86 SS G_CDS: 3.60 Total: 11.47 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -2.83 Total: -4.60 kcal Atomic # 8 Polarization: -16.95 SS G_CDS: -2.42 Total: -19.37 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: 2.07 Total: 0.26 kcal Total: -30.56 -3.52 -34.09 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857876_17914554.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.859 kcal (2) G-P(sol) polarization free energy of solvation -30.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.085 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds