Wall clock time and date at job start Sat Mar 6 2021 06:03:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47146 * 2 1 4 4 C 1.50695 * 109.46955 * 239.99761 * 2 1 3 5 5 C 1.32694 * 124.68660 * 299.99519 * 4 2 1 6 6 C 1.44501 * 113.10336 * 179.97438 * 5 4 2 7 7 C 1.47040 * 123.49960 * 180.02562 * 6 5 4 8 8 O 1.21650 * 120.00537 * 179.97438 * 7 6 5 9 9 N 1.34783 * 119.99549 * 0.02562 * 7 6 5 10 10 C 1.46502 * 119.99724 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85145 * 23.80296 * 10 9 7 12 12 C 1.53784 * 113.61191 * 154.99930 * 10 9 7 13 13 C 1.53784 * 87.08012 * 139.97905 * 12 10 9 14 14 H 1.08996 * 113.61140 * 89.20211 * 13 12 10 15 15 C 1.53004 * 113.61327 * 220.01937 * 13 12 10 16 16 C 1.50699 * 109.46978 * 185.00141 * 15 13 12 17 17 N 1.31043 * 126.54866 * 89.99921 * 16 15 13 18 18 N 1.28881 * 107.91348 * 180.02562 * 17 16 15 19 19 N 1.28776 * 109.10493 * 359.97438 * 18 17 16 20 20 N 1.29001 * 108.72535 * 359.72758 * 19 18 17 21 21 C 1.53781 * 87.08301 * 334.56446 * 13 12 10 22 22 C 1.36231 * 113.01527 * 0.02562 * 6 5 4 23 23 Cl 1.73597 * 124.60846 * 179.97438 * 22 6 5 24 24 S 1.70453 * 110.78628 * 359.74801 * 22 6 5 25 25 H 0.96700 * 113.99995 * 60.00040 * 1 2 3 26 26 H 1.09001 * 109.46621 * 119.99651 * 2 1 3 27 27 H 1.48501 * 109.99832 * 298.67587 * 3 2 1 28 28 H 1.48498 * 109.99998 * 59.99906 * 3 2 1 29 29 H 1.08000 * 123.44883 * 359.96538 * 5 4 2 30 30 H 0.96995 * 120.00079 * 359.97438 * 9 7 6 31 31 H 1.08994 * 113.61314 * 254.53079 * 12 10 9 32 32 H 1.09001 * 113.61259 * 25.42869 * 12 10 9 33 33 H 1.09001 * 109.46557 * 304.99923 * 15 13 12 34 34 H 1.09000 * 109.47277 * 64.99848 * 15 13 12 35 35 H 0.97000 * 125.44914 * 179.97438 * 18 17 16 36 36 H 1.08996 * 113.61880 * 270.88639 * 21 13 12 37 37 H 1.08994 * 113.61221 * 139.97691 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6687 -1.9757 -1.5319 6 6 2.2768 -2.4011 -2.7718 7 6 2.1339 -3.7570 -3.3225 8 8 2.6738 -4.0468 -4.3734 9 7 1.4039 -4.6785 -2.6633 10 6 1.2611 -6.0293 -3.2122 11 1 2.0738 -6.3005 -3.8860 12 6 0.9604 -7.0980 -2.1481 13 6 -0.0173 -7.7181 -3.1603 14 1 0.4447 -8.4528 -3.8197 15 6 -1.3167 -8.2212 -2.5282 16 6 -2.1480 -8.9168 -3.5750 17 7 -2.1106 -10.1903 -3.8819 18 7 -2.9670 -10.3967 -4.8226 19 7 -3.5454 -9.2846 -5.1175 20 7 -3.0664 -8.3555 -4.3616 21 6 -0.1375 -6.3174 -3.7835 22 6 2.9962 -1.4157 -3.3778 23 17 3.8502 -1.5987 -4.8780 24 16 2.9389 0.0232 -2.4658 25 1 -0.3933 0.4417 -0.7650 26 1 1.7922 -0.5138 0.8900 27 1 1.5880 2.4585 -1.2243 28 1 1.5615 2.4679 1.2085 29 1 1.0626 -2.6215 -0.9138 30 1 0.9731 -4.4474 -1.8256 31 1 1.8132 -7.7363 -1.9173 32 1 0.4734 -6.7020 -1.2569 33 1 -1.0831 -8.9208 -1.7256 34 1 -1.8744 -7.3768 -2.1233 35 1 -3.1471 -11.2528 -5.2415 36 1 -0.9245 -5.7079 -3.3394 37 1 -0.1708 -6.3256 -4.8729 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_280130_17857876_17970274.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:03:28 Heat of formation + Delta-G solvation = 110.523050 kcal Electronic energy + Delta-G solvation = -25677.410826 eV Core-core repulsion = 21612.981423 eV Total energy + Delta-G solvation = -4064.429403 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.050 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -45.46407 -41.34565 -39.87966 -38.80205 -37.95536 -36.98880 -35.63573 -34.96363 -34.06341 -31.66112 -30.37160 -26.96435 -26.65487 -26.36118 -25.55416 -24.24911 -22.60099 -22.07391 -21.04384 -20.31107 -20.12670 -19.35680 -18.14427 -17.99441 -17.76473 -17.12625 -16.51057 -16.35631 -16.00024 -15.92449 -15.75877 -15.63561 -14.87639 -14.74590 -14.59154 -14.35886 -14.13392 -13.90812 -13.58433 -13.35537 -13.27243 -12.92197 -12.64698 -12.57503 -12.46955 -12.32782 -12.22295 -12.11368 -11.97387 -11.91836 -11.78888 -11.32773 -11.10215 -10.91903 -10.69858 -10.10297 -9.84416 -9.61911 -5.03370 -0.60640 -0.16499 0.12956 0.51020 0.75116 1.06563 1.07863 1.21511 1.50838 1.55405 1.91739 2.19433 2.23098 2.90634 3.27044 3.32118 3.50720 3.53969 3.63471 3.85023 3.87326 3.90446 3.94164 4.30573 4.37718 4.48545 4.56900 4.57705 4.66370 4.78178 4.81212 4.84104 4.90328 4.98829 5.00885 5.09880 5.16054 5.31632 5.61871 5.63417 6.43731 6.51845 7.19371 7.21957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.026 4.026 3 Si 0.702 3.298 4 C -0.225 4.225 5 C -0.066 4.066 6 C -0.166 4.166 7 C 0.569 3.431 8 O -0.564 6.564 9 N -0.696 5.696 10 C 0.116 3.884 11 H 0.092 0.908 12 C -0.116 4.116 13 C -0.096 4.096 14 H 0.086 0.914 15 C -0.011 4.011 16 C 0.172 3.828 17 N -0.309 5.309 18 N -0.211 5.211 19 N -0.071 5.071 20 N -0.304 5.304 21 C -0.144 4.144 22 C -0.141 4.141 23 Cl 0.000 7.000 24 S 0.260 5.740 25 H 0.389 0.611 26 H 0.152 0.848 27 H -0.261 1.261 28 H -0.269 1.269 29 H 0.184 0.816 30 H 0.416 0.584 31 H 0.087 0.913 32 H 0.119 0.881 33 H 0.118 0.882 34 H 0.114 0.886 35 H 0.490 0.510 36 H 0.100 0.900 37 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.272 -0.847 7.155 7.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.138 4.138 3 Si 0.604 3.396 4 C -0.342 4.342 5 C -0.095 4.095 6 C -0.186 4.186 7 C 0.355 3.645 8 O -0.444 6.444 9 N -0.348 5.348 10 C 0.011 3.989 11 H 0.110 0.890 12 C -0.154 4.154 13 C -0.116 4.116 14 H 0.104 0.896 15 C -0.051 4.051 16 C -0.111 4.111 17 N -0.162 5.162 18 N -0.061 5.061 19 N -0.066 5.066 20 N -0.176 5.176 21 C -0.183 4.183 22 C -0.288 4.288 23 Cl 0.029 6.971 24 S 0.525 5.475 25 H 0.239 0.761 26 H 0.170 0.830 27 H -0.187 1.187 28 H -0.194 1.194 29 H 0.201 0.799 30 H 0.255 0.745 31 H 0.106 0.894 32 H 0.137 0.863 33 H 0.137 0.863 34 H 0.132 0.868 35 H 0.348 0.652 36 H 0.118 0.882 37 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 0.776 0.886 6.172 6.283 hybrid contribution -1.486 -2.056 -0.863 2.680 sum -0.710 -1.170 5.309 5.482 Atomic orbital electron populations 1.86621 1.17323 1.80064 1.50220 1.24458 0.83596 1.09646 0.96117 0.94569 0.90780 0.74162 0.80094 1.24877 1.07378 0.99068 1.02915 1.21141 0.99203 0.95462 0.93678 1.20378 1.04907 0.94844 0.98452 1.17766 0.78514 0.84437 0.83807 1.90853 1.48814 1.80830 1.23908 1.45690 1.51567 1.11071 1.26430 1.22514 0.97505 0.81092 0.97746 0.88996 1.23341 0.99278 0.95646 0.97136 1.22216 0.94974 0.95769 0.98655 0.89611 1.20184 0.92205 1.00487 0.92190 1.26282 0.97342 0.87076 1.00354 1.74711 1.13869 1.19962 1.07628 1.47895 1.22552 1.12744 1.22924 1.78948 1.18420 0.90030 1.19236 1.75893 1.11461 1.23677 1.06576 1.23568 0.97653 0.96929 1.00155 1.25829 1.03876 1.02516 0.96548 1.98424 1.73921 1.97283 1.27485 1.83288 1.46451 1.06822 1.10922 0.76059 0.83042 1.18668 1.19403 0.79936 0.74544 0.89398 0.86318 0.86338 0.86800 0.65249 0.88181 0.93630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 2.50 12.85 -148.98 -1.91 0.59 16 2 C -0.03 0.18 2.94 71.23 0.21 0.39 16 3 Si 0.70 -4.09 30.91 68.60 2.12 -1.97 16 4 C -0.22 1.16 5.68 24.51 0.14 1.30 16 5 C -0.07 0.30 9.71 22.70 0.22 0.52 16 6 C -0.17 -0.41 5.98 -19.84 -0.12 -0.52 16 7 C 0.57 3.36 7.79 86.55 0.67 4.03 16 8 O -0.56 -8.17 14.51 -4.19 -0.06 -8.23 16 9 N -0.70 1.20 5.33 -443.63 -2.37 -1.16 16 10 C 0.12 -0.15 4.24 45.52 0.19 0.04 16 11 H 0.09 0.39 7.46 -2.39 -0.02 0.38 16 12 C -0.12 0.93 7.39 31.12 0.23 1.16 16 13 C -0.10 0.44 3.64 -10.26 -0.04 0.40 16 14 H 0.09 -0.17 8.12 -2.39 -0.02 -0.19 16 15 C -0.01 0.06 5.68 29.85 0.17 0.23 16 16 C 0.17 0.36 7.61 138.55 1.05 1.42 16 17 N -0.31 -0.54 12.36 -51.20 -0.63 -1.17 16 18 N -0.21 0.14 7.91 37.00 0.29 0.44 16 19 N -0.07 -0.38 13.48 37.02 0.50 0.12 16 20 N -0.30 -2.09 12.50 -51.26 -0.64 -2.73 16 21 C -0.14 0.15 7.43 31.12 0.23 0.38 16 22 C -0.14 -0.58 6.87 67.35 0.46 -0.12 16 23 Cl 0.00 0.00 27.20 -2.72 -0.07 -0.07 16 24 S 0.26 -0.61 20.17 -56.49 -1.14 -1.75 16 25 H 0.39 -3.63 8.70 -74.06 -0.64 -4.28 16 26 H 0.15 -1.61 7.96 -2.39 -0.02 -1.63 16 27 H -0.26 0.45 7.11 99.48 0.71 1.16 16 28 H -0.27 -0.22 7.11 99.48 0.71 0.49 16 29 H 0.18 -1.86 7.10 -2.91 -0.02 -1.88 16 30 H 0.42 -3.58 7.27 -92.71 -0.67 -4.25 16 31 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 32 H 0.12 -1.53 8.08 -2.39 -0.02 -1.55 16 33 H 0.12 -1.06 8.14 -2.39 -0.02 -1.08 16 34 H 0.11 -0.89 7.84 -2.39 -0.02 -0.91 16 35 H 0.49 -4.60 8.96 -347.68 -3.12 -7.72 16 36 H 0.10 -0.28 7.90 -2.39 -0.02 -0.29 16 37 H 0.04 0.21 8.14 -2.39 -0.02 0.19 16 Total: 0.00 -25.32 350.22 -3.70 -29.02 By element: Atomic # 1 Polarization: -19.10 SS G_CDS: -3.21 Total: -22.31 kcal Atomic # 6 Polarization: 5.80 SS G_CDS: 3.43 Total: 9.23 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: -2.85 Total: -4.51 kcal Atomic # 8 Polarization: -5.67 SS G_CDS: -1.97 Total: -7.64 kcal Atomic # 14 Polarization: -4.09 SS G_CDS: 2.12 Total: -1.97 kcal Atomic # 16 Polarization: -0.61 SS G_CDS: -1.14 Total: -1.75 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -0.07 Total: -0.07 kcal Total: -25.32 -3.70 -29.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857876_17970274.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.545 kcal (2) G-P(sol) polarization free energy of solvation -25.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.700 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.022 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds