Wall clock time and date at job start Sat Mar 6 2021 06:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46754 * 2 1 4 4 C 1.50696 * 109.47501 * 239.99809 * 2 1 3 5 5 C 1.31112 * 118.54845 * 106.04233 * 4 2 1 6 6 N 1.38927 * 121.85074 * 179.61544 * 5 4 2 7 7 C 1.47031 * 118.88190 * 13.29421 * 6 5 4 8 8 C 1.53490 * 107.50509 * 316.25265 * 7 6 5 9 9 C 1.50202 * 118.54489 * 286.01993 * 4 2 1 10 10 C 1.50700 * 109.33390 * 320.31336 * 9 4 2 11 11 O 1.21276 * 119.99896 * 278.23269 * 10 9 4 12 12 N 1.34769 * 120.00038 * 98.22745 * 10 9 4 13 13 C 1.46502 * 120.00043 * 174.94592 * 12 10 9 14 14 H 1.08995 * 112.85022 * 336.19977 * 13 12 10 15 15 C 1.53782 * 113.68765 * 107.46554 * 13 12 10 16 16 C 1.53782 * 87.07930 * 139.99450 * 15 13 12 17 17 H 1.09001 * 113.69168 * 89.13056 * 16 15 13 18 18 C 1.53001 * 113.61694 * 220.01791 * 16 15 13 19 19 C 1.50703 * 109.46972 * 272.49997 * 18 16 15 20 20 N 1.31040 * 126.55116 * 89.99832 * 19 18 16 21 21 N 1.28883 * 107.91688 * 179.97438 * 20 19 18 22 22 N 1.28789 * 109.09900 * 0.02562 * 21 20 19 23 23 N 1.28995 * 108.72732 * 359.72564 * 22 21 20 24 24 C 1.53776 * 87.08135 * 334.56734 * 16 15 13 25 25 H 0.96710 * 113.99564 * 174.88806 * 1 2 3 26 26 H 1.09001 * 109.46767 * 119.99237 * 2 1 3 27 27 H 1.48504 * 109.99659 * 179.97438 * 3 2 1 28 28 H 1.48498 * 109.99858 * 301.31355 * 3 2 1 29 29 H 1.08005 * 119.07533 * 359.59602 * 5 4 2 30 30 H 0.96998 * 120.55896 * 193.26989 * 6 5 4 31 31 H 1.09002 * 109.81864 * 75.87692 * 7 6 5 32 32 H 1.08997 * 109.82229 * 196.73079 * 7 6 5 33 33 H 1.08999 * 109.75148 * 301.40114 * 8 7 6 34 34 H 1.08997 * 109.46904 * 180.85494 * 8 7 6 35 35 H 1.09003 * 109.33156 * 79.96580 * 9 4 2 36 36 H 0.97004 * 120.00457 * 354.94984 * 12 10 9 37 37 H 1.08993 * 113.62110 * 25.44710 * 15 13 12 38 38 H 1.09004 * 113.61612 * 254.53556 * 15 13 12 39 39 H 1.08996 * 109.47638 * 152.49538 * 18 16 15 40 40 H 1.09000 * 109.46812 * 32.49513 * 18 16 15 41 41 H 0.96998 * 125.44869 * 179.97438 * 21 20 19 42 42 H 1.09001 * 113.61847 * 139.98269 * 24 16 15 43 43 H 1.09001 * 113.61500 * 270.87935 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4404 0.0058 -2.2035 6 7 2.9308 -0.5784 -3.3647 7 6 2.6158 -1.9883 -3.6381 8 6 2.8017 -2.7654 -2.3276 9 6 1.8274 -2.2077 -1.2874 10 6 2.1592 -2.7828 0.0655 11 8 3.3171 -2.9347 0.3924 12 7 1.1691 -3.1281 0.9121 13 6 1.4871 -3.7887 2.1806 14 1 2.4449 -4.3083 2.1587 15 6 1.3049 -2.8842 3.4108 16 6 0.7162 -4.1108 4.1275 17 1 1.4623 -4.7194 4.6386 18 6 -0.4902 -3.7846 5.0102 19 6 -0.0148 -3.3906 6.3850 20 7 0.2802 -2.1803 6.7916 21 7 0.6458 -2.2546 8.0252 22 7 0.5895 -3.4830 8.4082 23 7 0.1807 -4.2061 7.4213 24 6 0.3354 -4.6430 2.7359 25 1 -0.3933 -0.8800 -0.0787 26 1 1.7923 -0.5137 0.8901 27 1 3.5349 1.7702 0.0006 28 1 1.5354 2.4770 -1.1922 29 1 2.4792 1.0802 -2.0997 30 1 3.4716 -0.0646 -3.9848 31 1 1.5847 -2.0769 -3.9805 32 1 3.2924 -2.3773 -4.3990 33 1 3.8249 -2.6471 -1.9712 34 1 2.5903 -3.8210 -2.4982 35 1 0.8098 -2.4887 -1.5590 36 1 0.2460 -2.9394 0.6817 37 1 0.5850 -2.0801 3.2589 38 1 2.2445 -2.5368 3.8405 39 1 -1.1331 -4.6615 5.0855 40 1 -1.0505 -2.9601 4.5694 41 1 0.9202 -1.5053 8.5768 42 1 0.4922 -5.7154 2.6205 43 1 -0.6497 -4.3197 2.3994 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_280130_17857876_17981140.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:03:50 Heat of formation + Delta-G solvation = 99.995651 kcal Electronic energy + Delta-G solvation = -27480.396560 eV Core-core repulsion = 23566.109333 eV Total energy + Delta-G solvation = -3914.287227 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.159 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -45.38362 -41.65210 -40.35025 -38.87680 -37.48810 -35.59060 -34.88439 -34.11578 -33.33286 -32.87472 -30.40687 -27.43971 -26.78973 -26.14369 -25.45676 -24.55786 -23.35594 -22.74231 -21.63461 -20.78948 -20.01504 -19.34946 -19.03032 -18.09470 -17.99026 -17.86704 -17.26234 -16.57575 -16.44639 -15.90129 -15.56005 -15.30771 -15.25713 -15.07685 -14.69661 -14.65036 -14.33566 -14.10088 -13.71643 -13.63267 -13.50734 -13.25827 -13.06298 -12.96019 -12.66632 -12.36230 -12.23306 -12.13448 -12.09912 -12.00263 -11.95851 -11.55874 -11.43579 -11.09229 -11.05591 -10.84450 -10.59977 -10.00576 -8.58817 -4.76543 0.22450 1.15249 1.18538 1.40998 1.44480 1.68785 1.74005 1.97167 2.21395 2.45524 2.87421 3.28207 3.41583 3.48575 3.56104 3.65086 3.73648 3.77286 3.81198 3.93791 4.01904 4.20711 4.23149 4.27508 4.34531 4.42156 4.52820 4.54211 4.58281 4.62316 4.63293 4.65456 4.71309 4.74998 4.86334 5.00562 5.01535 5.06531 5.17586 5.25310 5.33876 5.50258 5.55544 6.18386 6.46206 6.61817 6.68694 7.26375 7.31085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.064 4.064 3 Si 0.734 3.266 4 C -0.275 4.275 5 C 0.155 3.845 6 N -0.749 5.749 7 C 0.122 3.878 8 C -0.126 4.126 9 C -0.041 4.041 10 C 0.526 3.474 11 O -0.532 6.532 12 N -0.721 5.721 13 C 0.122 3.878 14 H 0.114 0.886 15 C -0.145 4.145 16 C -0.104 4.104 17 H 0.098 0.902 18 C -0.012 4.012 19 C 0.176 3.824 20 N -0.296 5.296 21 N -0.230 5.230 22 N -0.051 5.051 23 N -0.277 5.277 24 C -0.137 4.137 25 H 0.354 0.646 26 H 0.064 0.936 27 H -0.252 1.252 28 H -0.255 1.255 29 H 0.128 0.872 30 H 0.403 0.597 31 H 0.063 0.937 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.079 0.921 35 H 0.087 0.913 36 H 0.399 0.601 37 H 0.092 0.908 38 H 0.070 0.930 39 H 0.102 0.898 40 H 0.097 0.903 41 H 0.475 0.525 42 H 0.080 0.920 43 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.015 1.106 -1.849 3.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.174 4.174 3 Si 0.634 3.366 4 C -0.285 4.285 5 C 0.033 3.967 6 N -0.379 5.379 7 C -0.002 4.002 8 C -0.165 4.165 9 C -0.062 4.062 10 C 0.312 3.688 11 O -0.407 6.407 12 N -0.373 5.373 13 C 0.017 3.983 14 H 0.132 0.868 15 C -0.183 4.183 16 C -0.124 4.124 17 H 0.116 0.884 18 C -0.052 4.052 19 C -0.107 4.107 20 N -0.148 5.148 21 N -0.076 5.076 22 N -0.047 5.047 23 N -0.150 5.150 24 C -0.175 4.175 25 H 0.200 0.800 26 H 0.082 0.918 27 H -0.177 1.177 28 H -0.180 1.180 29 H 0.145 0.855 30 H 0.238 0.762 31 H 0.081 0.919 32 H 0.103 0.897 33 H 0.104 0.896 34 H 0.097 0.903 35 H 0.105 0.895 36 H 0.234 0.766 37 H 0.111 0.889 38 H 0.089 0.911 39 H 0.120 0.880 40 H 0.116 0.884 41 H 0.329 0.671 42 H 0.099 0.901 43 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.497 1.940 -1.424 2.834 hybrid contribution -0.203 -0.737 -1.003 1.262 sum -1.700 1.203 -2.427 3.198 Atomic orbital electron populations 1.86783 1.17890 1.32688 1.96766 1.25064 0.83988 1.12772 0.95527 0.93116 0.78735 0.77102 0.87659 1.20449 1.16720 0.93277 0.98102 1.20383 0.93634 0.96111 0.86545 1.44584 1.58268 1.12006 1.23027 1.21611 1.00980 0.80894 0.96750 1.21800 1.00833 0.99434 0.94413 1.19702 1.00774 0.92963 0.92763 1.20546 0.85528 0.76733 0.85948 1.90708 1.19809 1.53289 1.76943 1.46089 1.09640 1.61579 1.19949 1.22483 0.99738 0.94292 0.81763 0.86847 1.23568 1.02039 0.97063 0.95673 1.22343 0.97314 0.98589 0.94162 0.88372 1.19991 0.97613 1.03286 0.84350 1.25696 1.01105 0.84927 0.98966 1.74737 1.18566 1.25187 0.96286 1.47849 1.42322 1.09748 1.07718 1.79006 1.14410 0.89512 1.21738 1.75915 1.15671 1.26322 0.97101 1.23390 0.98850 1.00690 0.94574 0.79987 0.91770 1.17651 1.18014 0.85499 0.76247 0.91861 0.89730 0.89571 0.90272 0.89517 0.76633 0.88949 0.91089 0.87971 0.88413 0.67099 0.90125 0.88954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.11 12.68 -35.23 -0.45 -0.55 16 2 C -0.06 -0.06 2.45 36.00 0.09 0.03 16 3 Si 0.73 0.46 30.27 -169.99 -5.15 -4.68 16 4 C -0.27 -0.37 4.97 -101.34 -0.50 -0.88 16 5 C 0.16 0.23 9.60 -16.08 -0.15 0.08 16 6 N -0.75 0.12 5.83 -60.71 -0.35 -0.24 16 7 C 0.12 -0.16 7.16 -3.50 -0.03 -0.18 16 8 C -0.13 -0.02 5.32 -26.45 -0.14 -0.16 16 9 C -0.04 -0.01 2.59 -93.14 -0.24 -0.25 16 10 C 0.53 0.84 5.18 -10.99 -0.06 0.78 16 11 O -0.53 -3.20 15.80 5.56 0.09 -3.11 16 12 N -0.72 1.13 5.32 -53.02 -0.28 0.84 16 13 C 0.12 -0.15 4.20 -67.12 -0.28 -0.43 16 14 H 0.11 0.12 7.53 -51.93 -0.39 -0.28 16 15 C -0.14 0.20 7.43 -25.92 -0.19 0.00 16 16 C -0.10 0.23 3.64 -89.81 -0.33 -0.10 16 17 H 0.10 -0.09 8.12 -51.93 -0.42 -0.52 16 18 C -0.01 0.03 5.68 -27.88 -0.16 -0.13 16 19 C 0.18 0.18 7.61 -156.62 -1.19 -1.01 16 20 N -0.30 -0.24 12.36 32.47 0.40 0.16 16 21 N -0.23 0.11 7.91 60.34 0.48 0.59 16 22 N -0.05 -0.12 13.48 60.35 0.81 0.70 16 23 N -0.28 -0.87 12.50 32.45 0.41 -0.46 16 24 C -0.14 0.47 7.39 -25.92 -0.19 0.27 16 25 H 0.35 -1.03 8.49 45.56 0.39 -0.65 16 26 H 0.06 0.09 6.70 -51.93 -0.35 -0.26 16 27 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 28 H -0.25 -0.62 6.81 56.52 0.38 -0.24 16 29 H 0.13 0.17 4.41 -52.48 -0.23 -0.06 16 30 H 0.40 -0.77 8.96 -40.82 -0.37 -1.14 16 31 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.09 0.24 7.53 -51.93 -0.39 -0.15 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.09 -0.18 8.09 -51.93 -0.42 -0.60 16 36 H 0.40 -1.73 8.27 -40.82 -0.34 -2.07 16 37 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.10 -0.33 7.84 -51.93 -0.41 -0.74 16 41 H 0.47 -2.25 8.96 -340.52 -3.05 -5.30 16 42 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 43 H 0.09 -0.46 8.08 -51.93 -0.42 -0.88 16 LS Contribution 353.04 15.07 5.32 5.32 Total: 0.00 -9.99 353.04 -10.66 -20.65 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -8.56 Total: -17.24 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -3.38 Total: -1.97 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: 1.46 Total: 1.59 kcal Atomic # 8 Polarization: -3.30 SS G_CDS: -0.36 Total: -3.66 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: -5.15 Total: -4.68 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -9.99 -10.66 -20.65 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_280130_17857876_17981140.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.647 kcal (2) G-P(sol) polarization free energy of solvation -9.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.651 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.996 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds