Wall clock time and date at job start Fri Mar 5 2021 23:04:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35992 * 116.99486 * 2 1 4 4 C 1.38523 * 120.07795 * 359.97438 * 3 2 1 5 5 C 1.38276 * 120.00665 * 180.02562 * 4 3 2 6 6 C 1.50700 * 119.93342 * 179.97438 * 5 4 3 7 7 C 1.38214 * 120.14256 * 0.02562 * 5 4 3 8 8 C 1.50704 * 119.92526 * 179.97438 * 7 5 4 9 9 O 1.42893 * 109.47462 * 74.99637 * 8 7 5 10 10 Si 1.86305 * 109.46681 * 194.99802 * 8 7 5 11 11 C 1.38288 * 120.14854 * 359.67747 * 7 5 4 12 12 C 1.38522 * 119.99396 * 0.59745 * 11 7 5 13 13 O 1.35994 * 120.07163 * 179.70075 * 12 11 7 14 14 C 1.42900 * 117.00137 * 359.72886 * 13 12 11 15 15 C 1.53000 * 109.47069 * 180.02562 * 14 13 12 16 16 H 1.09002 * 109.47131 * 55.00128 * 15 14 13 17 17 C 1.53002 * 109.46806 * 174.99592 * 15 14 13 18 18 C 1.52997 * 109.46978 * 179.97438 * 17 15 14 19 19 C 1.53002 * 109.47415 * 300.00098 * 18 17 15 20 20 H 1.09002 * 109.47070 * 300.00053 * 19 18 17 21 21 O 1.42898 * 109.47113 * 179.97438 * 19 18 17 22 22 C 1.52997 * 109.46817 * 59.99873 * 19 18 17 23 23 C 1.52992 * 109.47482 * 300.00014 * 22 19 18 24 24 H 1.09000 * 109.47355 * 59.99892 * 1 2 3 25 25 H 1.09006 * 109.46482 * 179.97438 * 1 2 3 26 26 H 1.09005 * 109.47126 * 299.99155 * 1 2 3 27 27 H 1.08006 * 119.99737 * 0.03910 * 4 3 2 28 28 H 1.09003 * 109.47028 * 89.99805 * 6 5 4 29 29 H 1.09004 * 109.47406 * 209.99982 * 6 5 4 30 30 H 1.08996 * 109.46823 * 330.00147 * 6 5 4 31 31 H 1.08997 * 109.46910 * 314.99022 * 8 7 5 32 32 H 0.96705 * 113.99837 * 60.00327 * 9 8 7 33 33 H 1.48503 * 109.99780 * 179.97438 * 10 8 7 34 34 H 1.48498 * 110.00356 * 301.31276 * 10 8 7 35 35 H 1.08000 * 120.00649 * 180.32783 * 11 7 5 36 36 H 1.08991 * 109.47113 * 59.99637 * 14 13 12 37 37 H 1.09002 * 109.46699 * 299.99858 * 14 13 12 38 38 H 1.09002 * 109.47097 * 59.99871 * 17 15 14 39 39 H 1.08998 * 109.47844 * 300.00086 * 17 15 14 40 40 H 1.09000 * 109.47140 * 180.02562 * 18 17 15 41 41 H 1.09002 * 109.47497 * 60.00450 * 18 17 15 42 42 H 0.96708 * 113.99549 * 180.02562 * 21 19 18 43 43 H 1.09002 * 109.47153 * 60.00231 * 22 19 18 44 44 H 1.08998 * 109.47533 * 179.97438 * 22 19 18 45 45 H 1.09002 * 109.47103 * 300.00247 * 23 22 19 46 46 H 1.08996 * 109.47747 * 179.97438 * 23 22 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 1.2933 2.3745 -0.0005 5 6 1.9225 3.6058 -0.0011 6 6 1.1018 4.8697 -0.0022 7 6 3.3027 3.6800 -0.0016 8 6 3.9833 5.0246 -0.0028 9 8 3.8878 5.6080 1.2981 10 14 5.7774 4.8119 -0.4578 11 6 4.0604 2.5232 0.0051 12 6 3.4363 1.2865 -0.0001 13 8 4.1799 0.1479 0.0004 14 6 5.6007 0.3010 0.0003 15 6 6.2623 -1.0786 0.0002 16 1 5.8879 -1.6611 -0.8416 17 6 7.7785 -0.9171 -0.1256 18 6 8.4401 -2.2966 -0.1251 19 6 8.1111 -3.0196 1.1826 20 1 8.4855 -2.4368 2.0242 21 8 8.7286 -4.3083 1.1828 22 6 6.5949 -3.1811 1.3084 23 6 5.9332 -1.8016 1.3079 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3632 -1.0278 -0.0005 26 1 -0.3634 0.5137 0.8901 27 1 0.2147 2.3193 -0.0003 28 1 0.9034 5.1750 1.0252 29 1 1.6505 5.6588 -0.5164 30 1 0.1577 4.6893 -0.5163 31 1 3.4989 5.6763 -0.7298 32 1 4.2989 5.0807 1.9968 33 1 6.4598 6.1308 -0.4631 34 1 6.4417 3.8998 0.5076 35 1 5.1387 2.5838 0.0100 36 1 5.9069 0.8511 0.8900 37 1 5.9069 0.8504 -0.8899 38 1 8.1530 -0.3346 0.7162 39 1 8.0130 -0.4016 -1.0569 40 1 9.5204 -2.1815 -0.2143 41 1 8.0658 -2.8795 -0.9667 42 1 8.5617 -4.8242 1.9835 43 1 6.2205 -3.7639 0.4668 44 1 6.3603 -3.6966 2.2397 45 1 6.3076 -1.2188 2.1495 46 1 4.8530 -1.9167 1.3970 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_34_14060148_16737256.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:04:52 Heat of formation + Delta-G solvation = -144.033953 kcal Electronic energy + Delta-G solvation = -26528.727078 eV Core-core repulsion = 22771.038915 eV Total energy + Delta-G solvation = -3757.688163 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.171 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.77258 -40.35933 -39.32625 -39.06446 -37.14852 -36.63361 -33.11188 -32.17483 -31.85699 -31.50144 -28.84389 -27.69482 -26.85836 -25.53263 -23.82339 -23.32436 -22.00824 -21.98050 -20.89717 -19.46891 -18.36488 -18.19299 -17.93705 -17.33672 -17.14055 -16.62194 -16.26423 -16.16409 -16.06532 -15.61853 -15.50285 -15.30009 -14.76238 -14.70746 -14.39005 -14.26372 -14.13077 -13.70504 -13.52800 -13.38266 -13.25422 -13.23247 -12.92500 -12.77242 -12.55369 -12.24330 -12.16749 -12.06863 -12.01859 -11.70826 -11.65933 -11.56109 -11.50945 -11.13066 -10.71995 -10.56396 -9.70965 -8.69254 -5.02132 0.19641 0.37178 1.23947 1.50270 1.89719 2.14312 2.28936 2.58284 3.15338 3.37793 3.56019 3.59260 3.66299 3.73421 3.77250 3.88821 4.02828 4.07323 4.11520 4.18499 4.21537 4.23032 4.28654 4.31307 4.35097 4.41249 4.44619 4.46696 4.53705 4.58687 4.59400 4.72707 4.75851 4.80630 4.90854 4.95848 5.02005 5.07173 5.10848 5.12624 5.13765 5.20639 5.31290 5.39750 5.58144 5.66249 6.09181 6.38401 6.60615 6.70343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.304 6.304 3 C 0.111 3.889 4 C -0.175 4.175 5 C -0.053 4.053 6 C -0.112 4.112 7 C -0.118 4.118 8 C -0.068 4.068 9 O -0.526 6.526 10 Si 0.680 3.320 11 C -0.173 4.173 12 C 0.103 3.897 13 O -0.299 6.299 14 C 0.060 3.940 15 C -0.086 4.086 16 H 0.087 0.913 17 C -0.111 4.111 18 C -0.111 4.111 19 C 0.102 3.898 20 H 0.054 0.946 21 O -0.569 6.569 22 C -0.152 4.152 23 C -0.111 4.111 24 H 0.056 0.944 25 H 0.102 0.898 26 H 0.055 0.945 27 H 0.137 0.863 28 H 0.074 0.926 29 H 0.071 0.929 30 H 0.064 0.936 31 H 0.119 0.881 32 H 0.375 0.625 33 H -0.254 1.254 34 H -0.260 1.260 35 H 0.138 0.862 36 H 0.060 0.940 37 H 0.065 0.935 38 H 0.067 0.933 39 H 0.075 0.925 40 H 0.073 0.927 41 H 0.073 0.927 42 H 0.379 0.621 43 H 0.072 0.928 44 H 0.065 0.935 45 H 0.062 0.938 46 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.239 0.211 -0.595 1.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.065 3.935 4 C -0.193 4.193 5 C -0.053 4.053 6 C -0.169 4.169 7 C -0.119 4.119 8 C -0.178 4.178 9 O -0.332 6.332 10 Si 0.582 3.418 11 C -0.192 4.192 12 C 0.057 3.943 13 O -0.212 6.212 14 C -0.016 4.016 15 C -0.105 4.105 16 H 0.105 0.895 17 C -0.148 4.148 18 C -0.148 4.148 19 C 0.044 3.956 20 H 0.072 0.928 21 O -0.375 6.375 22 C -0.189 4.189 23 C -0.149 4.149 24 H 0.075 0.925 25 H 0.120 0.880 26 H 0.074 0.926 27 H 0.155 0.845 28 H 0.093 0.907 29 H 0.090 0.910 30 H 0.083 0.917 31 H 0.137 0.863 32 H 0.222 0.778 33 H -0.179 1.179 34 H -0.185 1.185 35 H 0.155 0.845 36 H 0.078 0.922 37 H 0.084 0.916 38 H 0.086 0.914 39 H 0.094 0.906 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.226 0.774 43 H 0.091 0.909 44 H 0.084 0.916 45 H 0.081 0.919 46 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.485 0.588 -1.268 1.479 hybrid contribution -0.640 -0.001 1.797 1.908 sum -1.125 0.586 0.529 1.375 Atomic orbital electron populations 1.23113 0.78250 1.04284 1.01339 1.86194 1.21241 1.25670 1.88667 1.18278 0.89106 0.85316 1.00778 1.21002 1.00087 0.90874 1.07370 1.19444 0.92847 0.94722 0.98331 1.20796 0.98861 0.94367 1.02855 1.19740 0.93502 0.94489 1.04122 1.24903 1.11030 0.93552 0.88343 1.86605 1.80402 1.49887 1.16348 0.95019 0.74686 0.81526 0.90559 1.21015 1.00162 0.91026 1.06951 1.18049 0.88156 0.85863 1.02196 1.86168 1.18326 1.27940 1.88807 1.22935 0.78539 0.98661 1.01431 1.21213 0.94845 0.94460 0.99971 0.89485 1.21489 0.93312 0.97116 1.02921 1.21436 1.01273 0.95065 0.97064 1.21852 0.91406 0.84299 0.98071 0.92801 1.86518 1.76058 1.29437 1.45482 1.22273 0.95919 0.97958 1.02796 1.21509 1.01551 0.95209 0.96603 0.92523 0.87975 0.92622 0.84482 0.90716 0.90978 0.91703 0.86308 0.77776 1.17915 1.18530 0.84455 0.92189 0.91636 0.91387 0.90625 0.90845 0.90862 0.77408 0.90885 0.91580 0.91933 0.90540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.30 -0.93 10.28 -34.20 -0.35 -1.28 16 3 C 0.11 0.32 6.70 -39.12 -0.26 0.05 16 4 C -0.17 -0.22 8.69 -39.46 -0.34 -0.56 16 5 C -0.05 -0.06 5.88 -104.62 -0.62 -0.67 16 6 C -0.11 0.03 9.53 36.01 0.34 0.37 16 7 C -0.12 -0.10 5.26 -104.61 -0.55 -0.65 16 8 C -0.07 0.00 2.04 36.01 0.07 0.08 16 9 O -0.53 -0.56 12.80 -35.23 -0.45 -1.01 16 10 Si 0.68 -0.56 30.25 -169.99 -5.14 -5.70 16 11 C -0.17 -0.18 7.64 -39.46 -0.30 -0.49 16 12 C 0.10 0.28 6.70 -39.12 -0.26 0.02 16 13 O -0.30 -0.83 9.46 -34.20 -0.32 -1.15 16 14 C 0.06 0.00 4.12 37.16 0.15 0.15 16 15 C -0.09 0.05 2.43 -90.62 -0.22 -0.17 16 16 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 17 C -0.11 0.17 5.20 -26.73 -0.14 0.03 16 18 C -0.11 0.02 5.57 -26.73 -0.15 -0.13 16 19 C 0.10 0.01 3.47 -26.73 -0.09 -0.09 16 20 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 21 O -0.57 -0.74 13.32 -35.23 -0.47 -1.21 16 22 C -0.15 0.05 5.54 -26.74 -0.15 -0.10 16 23 C -0.11 0.02 5.10 -26.73 -0.14 -0.12 16 24 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 25 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 26 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 27 H 0.14 -0.10 6.30 -52.48 -0.33 -0.43 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 -0.04 6.22 -51.93 -0.32 -0.36 16 30 H 0.06 -0.08 8.08 -51.93 -0.42 -0.50 16 31 H 0.12 -0.10 6.48 -51.93 -0.34 -0.44 16 32 H 0.37 -0.55 8.70 45.56 0.40 -0.15 16 33 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 34 H -0.26 -0.13 6.67 56.52 0.38 0.25 16 35 H 0.14 -0.05 3.10 -52.49 -0.16 -0.22 16 36 H 0.06 -0.04 7.65 -51.93 -0.40 -0.43 16 37 H 0.07 -0.09 7.68 -51.93 -0.40 -0.49 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 42 H 0.38 -0.95 9.08 45.56 0.41 -0.53 16 43 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 46 H 0.08 0.09 7.82 -51.93 -0.41 -0.32 16 LS Contribution 359.58 15.07 5.42 5.42 Total: 0.00 -6.64 359.58 -9.61 -16.25 By element: Atomic # 1 Polarization: -3.37 SS G_CDS: -6.63 Total: -10.01 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: -1.66 Total: -1.31 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -1.60 Total: -4.65 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.14 Total: -5.70 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -6.64 -9.61 -16.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_34_14060148_16737256.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.787 kcal (2) G-P(sol) polarization free energy of solvation -6.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.247 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds