Wall clock time and date at job start Fri Mar 5 2021 23:50:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42901 * 112.85046 * 2 1 4 4 C 1.53788 * 113.61405 * 131.19596 * 2 1 3 5 5 C 1.53776 * 87.08141 * 89.11848 * 4 2 1 6 6 H 1.09011 * 113.61082 * 270.80216 * 5 4 2 7 7 N 1.46499 * 113.61676 * 139.98638 * 5 4 2 8 8 S 1.65596 * 120.00275 * 131.15262 * 7 5 4 9 9 O 1.42097 * 106.40334 * 307.89213 * 8 7 5 10 10 O 1.42098 * 106.40108 * 174.97463 * 8 7 5 11 11 C 1.76206 * 107.21924 * 61.43333 * 8 7 5 12 12 C 1.33387 * 122.53530 * 165.14033 * 11 8 7 13 13 C 1.50691 * 125.20822 * 0.02562 * 12 11 8 14 14 O 1.42903 * 109.47018 * 39.61703 * 13 12 11 15 15 Si 1.86306 * 109.47114 * 159.60952 * 13 12 11 16 16 S 1.75894 * 109.58692 * 179.75227 * 12 11 8 17 17 C 1.75884 * 90.97016 * 0.22750 * 16 12 11 18 18 C 1.33381 * 109.59525 * 0.02562 * 17 16 12 19 19 C 1.53782 * 87.08335 * 25.43350 * 5 4 2 20 20 H 1.08997 * 109.46600 * 288.80319 * 1 2 3 21 21 H 1.08998 * 109.46872 * 48.80411 * 1 2 3 22 22 H 1.08997 * 109.47144 * 168.80315 * 1 2 3 23 23 H 0.96691 * 114.00183 * 311.19228 * 3 2 1 24 24 H 1.09000 * 113.61364 * 334.56455 * 4 2 1 25 25 H 1.09000 * 113.61239 * 203.66370 * 4 2 1 26 26 H 0.96994 * 119.99468 * 311.14865 * 7 5 4 27 27 H 1.08990 * 109.47190 * 279.61258 * 13 12 11 28 28 H 0.96694 * 114.00409 * 63.77163 * 14 13 12 29 29 H 1.48500 * 109.99960 * 58.68458 * 15 13 12 30 30 H 1.48496 * 109.99745 * 180.02562 * 15 13 12 31 31 H 1.08000 * 125.20017 * 179.97438 * 17 16 12 32 32 H 1.08006 * 122.54054 * 179.97438 * 18 17 16 33 33 H 1.08988 * 113.61340 * 89.11975 * 19 5 4 34 34 H 1.09002 * 113.61543 * 220.02603 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0849 1.3169 0.0000 4 6 2.1460 -0.9281 1.0603 5 6 2.0930 -2.0425 0.0020 6 1 1.1574 -2.6019 0.0035 7 7 3.2740 -2.9094 0.0029 8 16 3.0930 -4.5554 0.0069 9 8 2.2180 -4.8603 1.0842 10 8 4.3988 -5.1030 -0.1124 11 6 2.2346 -4.9894 -1.4694 12 6 2.1764 -6.2422 -1.9236 13 6 2.8153 -7.4364 -1.2629 14 8 2.6665 -7.3328 0.1546 15 14 1.9877 -8.9943 -1.8619 16 16 1.2332 -6.2883 -3.4075 17 6 0.9689 -4.5512 -3.3288 18 6 1.5728 -4.0554 -2.2478 19 6 2.1461 -0.9301 -1.0584 20 1 -0.3632 0.3312 0.9728 21 1 -0.3633 0.6769 -0.7733 22 1 -0.3633 -1.0081 -0.1995 23 1 1.7016 1.9052 -0.6647 24 1 1.4945 -1.1068 1.9157 25 1 3.1591 -0.6486 1.3496 26 1 4.1620 -2.5191 0.0011 27 1 3.8751 -7.4677 -1.5156 28 1 1.7482 -7.3580 0.4566 29 1 2.1077 -9.0977 -3.3384 30 1 2.6084 -10.1792 -1.2171 31 1 0.4046 -3.9742 -4.0464 32 1 1.5442 -3.0053 -1.9966 33 1 3.1591 -0.6513 -1.3483 34 1 1.4946 -1.1105 -1.9134 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11245586_14772022.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:50:33 Heat of formation + Delta-G solvation = -82.389786 kcal Electronic energy + Delta-G solvation = -22161.856136 eV Core-core repulsion = 18702.568743 eV Total energy + Delta-G solvation = -3459.287392 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.047 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.14415 -39.70029 -37.96947 -37.74516 -36.71086 -36.56298 -33.78098 -31.87574 -29.59787 -27.62649 -27.07646 -24.64246 -24.09475 -21.74439 -20.60194 -20.29262 -19.37034 -18.36710 -18.19876 -17.84839 -17.13147 -16.96843 -16.55399 -16.18647 -15.99068 -15.53877 -15.38031 -15.20755 -14.69249 -14.35826 -14.13487 -14.06114 -13.91974 -13.54679 -13.22793 -12.98196 -12.90368 -12.82016 -12.77328 -12.71691 -12.57255 -12.26448 -12.10677 -11.65771 -11.59753 -11.03708 -10.88187 -10.59383 -10.21735 -9.85932 -5.25707 -0.63297 -0.54841 0.27359 0.57500 0.97424 1.07378 1.42040 1.77116 1.97205 2.77936 3.03432 3.11768 3.23999 3.27433 3.37069 3.50324 3.58086 3.69104 3.90677 3.91985 4.04213 4.26083 4.27663 4.38175 4.46602 4.53350 4.63325 4.67501 4.74872 4.86711 4.92388 5.00162 5.01048 5.23406 5.83985 6.29403 6.59927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.104 3.896 3 O -0.549 6.549 4 C -0.130 4.130 5 C 0.123 3.877 6 H 0.121 0.879 7 N -1.106 6.106 8 S 2.718 3.282 9 O -0.942 6.942 10 O -0.947 6.947 11 C -0.662 4.662 12 C -0.099 4.099 13 C -0.071 4.071 14 O -0.531 6.531 15 Si 0.675 3.325 16 S 0.159 5.841 17 C -0.209 4.209 18 C -0.096 4.096 19 C -0.180 4.180 20 H 0.072 0.928 21 H 0.066 0.934 22 H 0.072 0.928 23 H 0.378 0.622 24 H 0.086 0.914 25 H 0.100 0.900 26 H 0.422 0.578 27 H 0.146 0.854 28 H 0.391 0.609 29 H -0.232 1.232 30 H -0.225 1.225 31 H 0.175 0.825 32 H 0.155 0.845 33 H 0.102 0.898 34 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.544 2.230 -3.898 7.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C 0.062 3.938 3 O -0.354 6.354 4 C -0.169 4.169 5 C 0.015 3.985 6 H 0.139 0.861 7 N -0.866 5.866 8 S 2.803 3.197 9 O -0.932 6.932 10 O -0.937 6.937 11 C -0.760 4.760 12 C -0.219 4.219 13 C -0.183 4.183 14 O -0.338 6.338 15 Si 0.572 3.428 16 S 0.423 5.577 17 C -0.345 4.345 18 C -0.124 4.124 19 C -0.220 4.220 20 H 0.091 0.909 21 H 0.085 0.915 22 H 0.091 0.909 23 H 0.226 0.774 24 H 0.105 0.895 25 H 0.119 0.881 26 H 0.257 0.743 27 H 0.163 0.837 28 H 0.241 0.759 29 H -0.156 1.156 30 H -0.147 1.147 31 H 0.193 0.807 32 H 0.172 0.828 33 H 0.120 0.880 34 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -4.813 -0.580 -4.276 6.464 hybrid contribution 0.489 2.259 -0.455 2.356 sum -4.324 1.679 -4.731 6.626 Atomic orbital electron populations 1.22234 0.93324 1.03312 1.03570 1.22399 0.92552 0.82329 0.96520 1.86584 1.65321 1.22351 1.61187 1.23547 1.03380 0.92803 0.97219 1.22149 0.88245 0.90369 0.97716 0.86136 1.55611 1.14378 1.25519 1.91054 1.01532 0.73733 0.71148 0.73245 1.93585 1.67911 1.82254 1.49464 1.93591 1.37601 1.75928 1.86548 1.29900 1.20380 0.99536 1.26210 1.25017 0.99824 0.97708 0.99390 1.25125 1.05881 1.02330 0.84938 1.86578 1.33642 1.95903 1.17704 0.94735 0.89790 0.76588 0.81689 1.84513 1.46051 1.06043 1.21123 1.25891 1.07556 0.97544 1.03482 1.19967 0.97759 1.00355 0.94290 1.24338 1.03481 0.96330 0.97811 0.90863 0.91473 0.90918 0.77367 0.89491 0.88140 0.74258 0.83711 0.75941 1.15591 1.14738 0.80734 0.82769 0.87989 0.90262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.54 9.32 37.16 0.35 0.89 16 2 C 0.10 -0.19 1.94 -89.80 -0.17 -0.37 16 3 O -0.55 0.28 13.50 -35.23 -0.48 -0.19 16 4 C -0.13 0.13 7.30 -25.92 -0.19 -0.06 16 5 C 0.12 -0.20 2.40 -67.12 -0.16 -0.37 16 6 H 0.12 -0.32 6.93 -51.92 -0.36 -0.68 16 7 N -1.11 0.53 5.61 -4.20 -0.02 0.51 16 8 S 2.72 6.97 4.14 -107.50 -0.44 6.52 16 9 O -0.94 -4.24 16.68 -64.84 -1.08 -5.32 16 10 O -0.95 -5.55 17.06 -62.17 -1.06 -6.61 16 11 C -0.66 -0.81 5.72 -41.21 -0.24 -1.04 16 12 C -0.10 -0.10 5.77 -36.01 -0.21 -0.31 16 13 C -0.07 -0.07 2.36 36.00 0.08 0.01 16 14 O -0.53 -1.09 9.75 -59.74 -0.58 -1.68 16 15 Si 0.67 -0.79 31.11 -169.99 -5.29 -6.08 16 16 S 0.16 -0.12 20.85 -107.50 -2.24 -2.36 16 17 C -0.21 0.31 11.23 29.03 0.33 0.63 16 18 C -0.10 0.07 9.22 -41.21 -0.38 -0.31 16 19 C -0.18 0.50 6.49 -25.92 -0.17 0.33 16 20 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 21 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 22 H 0.07 -0.30 7.34 -51.93 -0.38 -0.68 16 23 H 0.38 -1.57 9.04 45.56 0.41 -1.16 16 24 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 25 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.42 -0.78 8.96 -34.47 -0.31 -1.09 16 27 H 0.15 0.21 7.96 -51.93 -0.41 -0.20 16 28 H 0.39 -0.62 8.50 45.56 0.39 -0.24 16 29 H -0.23 0.00 7.11 56.52 0.40 0.40 16 30 H -0.22 -0.27 7.11 56.52 0.40 0.14 16 31 H 0.18 -0.71 8.06 -52.49 -0.42 -1.13 16 32 H 0.16 -0.45 3.66 -52.48 -0.19 -0.64 16 33 H 0.10 -0.24 8.14 -51.94 -0.42 -0.67 16 34 H 0.08 -0.34 7.02 -51.93 -0.36 -0.71 16 LS Contribution 302.78 15.07 4.56 4.56 Total: 0.00 -9.85 302.78 -10.35 -20.19 By element: Atomic # 1 Polarization: -6.02 SS G_CDS: -2.95 Total: -8.97 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -0.76 Total: -0.59 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.02 Total: 0.51 kcal Atomic # 8 Polarization: -10.60 SS G_CDS: -3.20 Total: -13.80 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.29 Total: -6.08 kcal Atomic # 16 Polarization: 6.85 SS G_CDS: -2.69 Total: 4.17 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -9.85 -10.35 -20.19 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11245586_14772022.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.195 kcal (2) G-P(sol) polarization free energy of solvation -9.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds