Wall clock time and date at job start Fri Mar 5 2021 23:50:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42904 * 112.84894 * 2 1 4 4 C 1.53778 * 113.69816 * 131.27458 * 2 1 3 5 5 C 1.53772 * 87.08489 * 139.99115 * 4 2 1 6 6 H 1.09003 * 113.69482 * 220.00985 * 5 4 2 7 7 N 1.46504 * 113.61491 * 89.11274 * 5 4 2 8 8 S 1.65607 * 119.99538 * 119.48196 * 7 5 4 9 9 O 1.42095 * 106.40132 * 313.96667 * 8 7 5 10 10 O 1.42098 * 106.39802 * 181.04820 * 8 7 5 11 11 C 1.76203 * 107.21716 * 67.50823 * 8 7 5 12 12 C 1.38218 * 119.99938 * 164.97524 * 11 8 7 13 13 C 1.50700 * 119.99790 * 359.97438 * 12 11 8 14 14 O 1.42896 * 109.47190 * 75.57320 * 13 12 11 15 15 Si 1.86303 * 109.47115 * 195.57769 * 13 12 11 16 16 C 1.38253 * 119.99923 * 179.97438 * 12 11 8 17 17 C 1.38205 * 120.00036 * 359.96103 * 16 12 11 18 18 C 1.38256 * 120.00445 * 359.97438 * 17 16 12 19 19 C 1.38217 * 119.99692 * 0.07286 * 18 17 16 20 20 C 1.53783 * 113.61476 * 228.81456 * 2 1 3 21 21 H 1.09004 * 109.46764 * 191.19446 * 1 2 3 22 22 H 1.09001 * 109.47062 * 311.18897 * 1 2 3 23 23 H 1.09000 * 109.47527 * 71.19637 * 1 2 3 24 24 H 0.96701 * 113.99252 * 48.80863 * 3 2 1 25 25 H 1.09002 * 113.61142 * 25.43998 * 4 2 1 26 26 H 1.09004 * 113.61203 * 254.54541 * 4 2 1 27 27 H 0.96994 * 120.00124 * 299.48396 * 7 5 4 28 28 H 1.09000 * 109.47061 * 315.57334 * 13 12 11 29 29 H 0.96692 * 114.00313 * 305.06620 * 14 13 12 30 30 H 1.48497 * 109.99599 * 298.68216 * 15 13 12 31 31 H 1.48501 * 109.99844 * 59.99308 * 15 13 12 32 32 H 1.08000 * 120.00063 * 179.97438 * 16 12 11 33 33 H 1.08003 * 120.00124 * 179.72359 * 17 16 12 34 34 H 1.08004 * 120.00871 * 180.02562 * 18 17 16 35 35 H 1.08007 * 120.00048 * 179.97438 * 19 18 17 36 36 H 1.08995 * 113.61701 * 105.37788 * 20 2 1 37 37 H 1.09003 * 113.61069 * 334.47351 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0849 1.3169 0.0000 4 6 2.1481 -0.9289 1.0583 5 6 3.1937 -1.3118 -0.0022 6 1 3.4480 -2.3718 -0.0039 7 7 4.3739 -0.4437 -0.0030 8 16 5.8731 -1.0843 0.2879 9 8 5.7330 -1.9374 1.4155 10 8 6.7887 0.0015 0.2437 11 6 6.2693 -2.1252 -1.0775 12 6 7.5709 -2.5493 -1.2683 13 6 8.6512 -2.1209 -0.3089 14 8 8.5315 -2.8638 0.9059 15 14 10.3210 -2.4410 -1.0707 16 6 7.8817 -3.3665 -2.3393 17 6 6.8908 -3.7600 -3.2186 18 6 5.5885 -3.3369 -3.0271 19 6 5.2779 -2.5192 -1.9569 20 6 2.1460 -0.9279 -1.0604 21 1 -0.3633 -1.0082 0.1995 22 1 -0.3633 0.6768 0.7734 23 1 -0.3634 0.3312 -0.9728 24 1 1.7014 1.9052 0.6648 25 1 1.4977 -1.7542 1.3481 26 1 2.5672 -0.3985 1.9134 27 1 4.2771 0.5062 -0.1738 28 1 8.5470 -1.0570 -0.0959 29 1 7.6585 -2.8063 1.3177 30 1 10.4880 -3.8924 -1.3366 31 1 10.4579 -1.6741 -2.3349 32 1 8.8988 -3.6975 -2.4886 33 1 7.1343 -4.3947 -4.0578 34 1 4.8140 -3.6447 -3.7140 35 1 4.2607 -2.1883 -1.8075 36 1 2.5636 -0.3968 -1.9158 37 1 1.4951 -1.7529 -1.3498 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11245586_2726874.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Mar 5 2021 23:50:43 Heat of formation + Delta-G solvation = -87.545524 kcal Electronic energy + Delta-G solvation = -23696.985577 eV Core-core repulsion = 20148.322369 eV Total energy + Delta-G solvation = -3548.663208 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.091 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.25339 -40.82340 -38.31665 -37.89939 -36.85505 -36.48584 -33.92331 -32.88810 -32.56121 -29.99495 -27.07109 -27.00202 -24.59926 -24.01388 -22.99125 -21.20934 -20.57134 -19.47392 -18.60522 -18.15196 -17.59447 -17.36746 -17.11156 -16.76805 -16.45002 -16.04267 -15.94056 -15.65190 -15.50407 -15.13030 -14.83520 -14.11064 -14.09900 -13.80351 -13.70030 -13.46648 -13.39153 -13.36488 -13.15883 -13.02164 -12.95656 -12.73367 -12.52193 -12.13931 -11.97534 -11.52117 -11.49149 -10.97186 -10.83708 -10.70925 -10.57110 -10.19034 -4.82749 -0.79264 -0.43386 -0.03165 1.30972 1.64351 1.67393 1.89344 2.22420 2.41764 2.80415 3.18657 3.25150 3.28044 3.33773 3.50694 3.57175 3.64811 3.67439 3.74101 3.90250 3.98269 4.03690 4.27060 4.31463 4.32955 4.41540 4.45903 4.52464 4.60533 4.67357 4.75349 4.82170 4.91421 4.97485 4.98977 5.09027 5.09895 5.54428 5.88066 6.42732 6.51072 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.105 3.895 3 O -0.545 6.545 4 C -0.175 4.175 5 C 0.123 3.877 6 H 0.106 0.894 7 N -1.089 6.089 8 S 2.690 3.310 9 O -0.948 6.948 10 O -0.947 6.947 11 C -0.666 4.666 12 C -0.008 4.008 13 C -0.151 4.151 14 O -0.530 6.530 15 Si 0.770 3.230 16 C -0.135 4.135 17 C -0.058 4.058 18 C -0.131 4.131 19 C -0.035 4.035 20 C -0.142 4.142 21 H 0.071 0.929 22 H 0.062 0.938 23 H 0.066 0.934 24 H 0.384 0.616 25 H 0.104 0.896 26 H 0.085 0.915 27 H 0.430 0.570 28 H 0.108 0.892 29 H 0.367 0.633 30 H -0.248 1.248 31 H -0.244 1.244 32 H 0.135 0.865 33 H 0.138 0.862 34 H 0.139 0.861 35 H 0.141 0.859 36 H 0.088 0.912 37 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.807 -0.182 -2.502 5.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.064 3.936 3 O -0.352 6.352 4 C -0.215 4.215 5 C 0.015 3.985 6 H 0.124 0.876 7 N -0.850 5.850 8 S 2.778 3.222 9 O -0.938 6.938 10 O -0.937 6.937 11 C -0.751 4.751 12 C -0.010 4.010 13 C -0.258 4.258 14 O -0.338 6.338 15 Si 0.667 3.333 16 C -0.153 4.153 17 C -0.076 4.076 18 C -0.150 4.150 19 C -0.054 4.054 20 C -0.181 4.181 21 H 0.090 0.910 22 H 0.081 0.919 23 H 0.085 0.915 24 H 0.233 0.767 25 H 0.122 0.878 26 H 0.103 0.897 27 H 0.268 0.732 28 H 0.125 0.875 29 H 0.218 0.782 30 H -0.173 1.173 31 H -0.168 1.168 32 H 0.152 0.848 33 H 0.156 0.844 34 H 0.156 0.844 35 H 0.159 0.841 36 H 0.107 0.893 37 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -2.884 -0.908 -3.050 4.295 hybrid contribution -2.444 0.280 -0.477 2.506 sum -5.328 -0.628 -3.527 6.421 Atomic orbital electron populations 1.22301 0.94372 1.03206 1.02960 1.22153 0.92066 0.83102 0.96278 1.86406 1.65702 1.21769 1.61312 1.24178 0.98188 1.00877 0.98246 1.21662 0.85457 0.93570 0.97858 0.87580 1.55199 1.21187 1.19694 1.88961 1.02224 0.72152 0.73819 0.74007 1.93611 1.85299 1.68323 1.46524 1.93620 1.60541 1.52783 1.86798 1.30804 1.00823 1.21006 1.22511 1.19903 0.92511 0.93271 0.95347 1.26240 1.10703 1.00796 0.88094 1.86786 1.38343 1.72818 1.35866 0.92412 0.80539 0.80689 0.79684 1.21211 1.00098 0.98639 0.95390 1.21501 0.92801 0.95796 0.97478 1.21369 0.97076 0.98302 0.98215 1.21087 0.97962 0.93752 0.92560 1.23629 0.97658 0.99226 0.97629 0.90980 0.91895 0.91505 0.76676 0.87751 0.89665 0.73160 0.87472 0.78207 1.17254 1.16819 0.84787 0.84436 0.84363 0.84129 0.89341 0.87051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.58 9.44 37.16 0.35 0.93 16 2 C 0.11 -0.27 1.81 -89.81 -0.16 -0.43 16 3 O -0.55 0.95 11.97 -35.23 -0.42 0.52 16 4 C -0.18 0.39 7.26 -25.93 -0.19 0.20 16 5 C 0.12 -0.22 2.67 -67.12 -0.18 -0.40 16 6 H 0.11 -0.29 7.19 -51.93 -0.37 -0.67 16 7 N -1.09 0.26 5.35 -4.20 -0.02 0.24 16 8 S 2.69 6.91 4.53 -107.50 -0.49 6.42 16 9 O -0.95 -4.18 15.57 -57.33 -0.89 -5.08 16 10 O -0.95 -4.77 15.69 -57.17 -0.90 -5.66 16 11 C -0.67 -1.67 5.78 -39.58 -0.23 -1.90 16 12 C -0.01 -0.03 5.23 -104.62 -0.55 -0.58 16 13 C -0.15 -0.58 2.10 36.01 0.08 -0.51 16 14 O -0.53 -2.63 12.68 -35.23 -0.45 -3.07 16 15 Si 0.77 1.00 30.43 -169.99 -5.17 -4.17 16 16 C -0.14 -0.32 8.66 -39.59 -0.34 -0.67 16 17 C -0.06 -0.02 10.05 -39.59 -0.40 -0.42 16 18 C -0.13 0.06 10.05 -39.58 -0.40 -0.34 16 19 C -0.03 -0.01 9.14 -39.58 -0.36 -0.37 16 20 C -0.14 0.44 6.61 -25.92 -0.17 0.27 16 21 H 0.07 -0.29 7.95 -51.93 -0.41 -0.70 16 22 H 0.06 -0.23 8.14 -51.93 -0.42 -0.65 16 23 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 24 H 0.38 -1.82 9.04 45.56 0.41 -1.41 16 25 H 0.10 -0.37 7.97 -51.93 -0.41 -0.79 16 26 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.43 -0.27 7.50 -34.48 -0.26 -0.53 16 28 H 0.11 0.41 5.50 -51.93 -0.29 0.12 16 29 H 0.37 1.64 6.05 45.56 0.28 1.92 16 30 H -0.25 -0.63 6.79 56.52 0.38 -0.25 16 31 H -0.24 -0.50 7.11 56.52 0.40 -0.09 16 32 H 0.13 0.20 4.95 -52.49 -0.26 -0.06 16 33 H 0.14 -0.33 8.06 -52.48 -0.42 -0.75 16 34 H 0.14 -0.46 8.06 -52.48 -0.42 -0.89 16 35 H 0.14 -0.36 4.56 -52.48 -0.24 -0.60 16 36 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.11 -0.56 8.10 -51.93 -0.42 -0.99 16 LS Contribution 306.40 15.07 4.62 4.62 Total: 0.00 -8.52 306.40 -10.00 -18.52 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -3.73 Total: -8.15 kcal Atomic # 6 Polarization: -1.64 SS G_CDS: -2.55 Total: -4.19 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.02 Total: 0.24 kcal Atomic # 8 Polarization: -10.63 SS G_CDS: -2.66 Total: -13.29 kcal Atomic # 14 Polarization: 1.00 SS G_CDS: -5.17 Total: -4.17 kcal Atomic # 16 Polarization: 6.91 SS G_CDS: -0.49 Total: 6.42 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -8.52 -10.00 -18.52 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11245586_2726874.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.023 kcal (2) G-P(sol) polarization free energy of solvation -8.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds