Wall clock time and date at job start Sat Mar 6 2021 00:16:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.45194 * 109.47339 * 239.99574 * 2 1 3 6 6 C 1.34639 * 116.99841 * 60.00459 * 5 2 1 7 7 O 1.21508 * 119.99991 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00005 * 179.97438 * 6 5 2 9 9 C 1.46505 * 119.99900 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.84899 * 23.80343 * 9 8 6 11 11 C 1.53782 * 113.61231 * 155.00465 * 9 8 6 12 12 C 1.53780 * 87.07914 * 139.98162 * 11 9 8 13 13 H 1.08996 * 113.61681 * 89.11464 * 12 11 9 14 14 S 1.81398 * 113.60883 * 220.01540 * 12 11 9 15 15 O 1.42101 * 110.54683 * 291.62195 * 14 12 11 16 16 O 1.42105 * 110.54514 * 68.37889 * 14 12 11 17 17 O 1.52202 * 104.44915 * 179.97438 * 14 12 11 18 18 C 1.35898 * 113.99989 * 75.00173 * 17 14 12 19 19 C 1.38672 * 120.04225 * 269.72408 * 18 17 14 20 20 C 1.38378 * 119.92154 * 179.76903 * 19 18 17 21 21 F 1.35099 * 120.00115 * 180.27469 * 20 19 18 22 22 C 1.38483 * 120.00544 * 0.48588 * 20 19 18 23 23 C 1.50694 * 119.95698 * 179.76996 * 22 20 19 24 24 O 1.42904 * 109.47032 * 195.02350 * 23 22 20 25 25 Si 1.86307 * 109.47268 * 315.01771 * 23 22 20 26 26 C 1.38250 * 120.08180 * 359.79145 * 22 20 19 27 27 C 1.38134 * 120.08027 * 359.95373 * 26 22 20 28 28 C 1.53773 * 87.08273 * 334.56420 * 12 11 9 29 29 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 31 31 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 32 32 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 35 35 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 36 36 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 37 37 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 38 38 H 0.97001 * 119.99769 * 0.02562 * 8 6 5 39 39 H 1.09000 * 113.60703 * 254.52583 * 11 9 8 40 40 H 1.08993 * 113.61370 * 25.42730 * 11 9 8 41 41 H 1.08004 * 120.03587 * 0.02562 * 19 18 17 42 42 H 1.08997 * 109.47382 * 75.01841 * 23 22 20 43 43 H 0.96697 * 114.00021 * 59.99760 * 24 23 22 44 44 H 1.48506 * 109.99584 * 58.68355 * 25 23 22 45 45 H 1.48497 * 109.99924 * 180.02562 * 25 23 22 46 46 H 1.08000 * 119.95868 * 179.97438 * 26 22 20 47 47 H 1.07999 * 119.99998 * 180.02562 * 27 26 22 48 48 H 1.09004 * 113.61844 * 270.88691 * 28 12 11 49 49 H 1.09004 * 113.61548 * 139.98502 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0140 -0.6845 -1.1854 6 6 1.6523 -0.1729 -2.3772 7 8 0.9510 0.8182 -2.4252 8 7 2.0682 -0.7601 -3.5168 9 6 1.6742 -0.2038 -4.8136 10 1 1.4211 0.8551 -4.7605 11 6 2.6477 -0.5482 -5.9531 12 6 1.4104 -0.7467 -6.8444 13 1 1.0840 0.1635 -7.3475 14 16 1.5439 -2.1651 -7.9673 15 8 2.5309 -1.9235 -8.9607 16 8 1.5230 -3.3836 -7.2364 17 8 0.2300 -2.1664 -8.7355 18 6 0.1449 -1.1997 -9.6868 19 6 -0.3763 0.0450 -9.3672 20 6 -0.4573 1.0290 -10.3367 21 9 -0.9598 2.2440 -10.0258 22 6 -0.0275 0.7672 -11.6269 23 6 -0.1210 1.8380 -12.6830 24 8 0.0419 1.2486 -13.9746 25 14 -1.7877 2.6646 -12.5836 26 6 0.4869 -0.4754 -11.9471 27 6 0.5742 -1.4586 -10.9808 28 6 0.6286 -1.0525 -5.5560 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 0.5139 0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8900 35 1 1.6767 -1.7488 1.2493 36 1 3.1300 -0.7207 1.2495 37 1 1.6766 -0.2073 2.1393 38 1 2.6277 -1.5516 -3.4784 39 1 3.2759 0.2886 -6.2584 40 1 3.2139 -1.4636 -5.7818 41 1 -0.7148 0.2473 -8.3618 42 1 0.6621 2.5785 -12.5201 43 1 -0.6220 0.5787 -14.1879 44 1 -1.9825 3.2541 -11.2345 45 1 -1.8927 3.7223 -13.6206 46 1 0.8212 -0.6776 -12.9540 47 1 0.9767 -2.4287 -11.2323 48 1 0.6428 -2.1060 -5.2762 49 1 -0.3732 -0.6231 -5.5407 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11680700_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:16:17 Heat of formation + Delta-G solvation = -183.665196 kcal Electronic energy + Delta-G solvation = -37134.480036 eV Core-core repulsion = 31879.991409 eV Total energy + Delta-G solvation = -5254.488627 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.128 amu Computer time = 3.09 seconds Orbital eigenvalues (eV) -50.55708 -42.39889 -41.89328 -40.46729 -39.90531 -38.43638 -37.88040 -37.62566 -37.31352 -35.36368 -34.20947 -32.48271 -32.13414 -28.35071 -28.31707 -27.50941 -27.30421 -27.22153 -24.49339 -23.93677 -23.52472 -22.02079 -21.57130 -20.93077 -19.81821 -19.36689 -19.21508 -19.01010 -18.70171 -18.14067 -17.67582 -17.37953 -17.27622 -17.17417 -16.91686 -16.79951 -16.34280 -16.06487 -15.96580 -15.63451 -15.44561 -15.42521 -15.32851 -14.46146 -14.44317 -14.37706 -14.27924 -14.08248 -13.91905 -13.68253 -13.56155 -13.43626 -13.41548 -13.36978 -13.24848 -13.15889 -13.04754 -12.87661 -12.85571 -12.79750 -12.60052 -12.54926 -12.28024 -12.21051 -11.58654 -11.47555 -11.33714 -11.03760 -11.03123 -10.39443 -10.34293 -9.88228 -5.12705 -1.30412 -0.42336 -0.33903 0.74877 1.10536 1.11307 1.55997 1.77426 1.83052 2.04175 2.29534 2.48103 2.67449 2.74948 2.92490 3.04669 3.08146 3.11500 3.24127 3.29611 3.38905 3.47447 3.69310 3.74674 3.80573 3.85185 3.94414 4.00059 4.11210 4.14017 4.22949 4.36434 4.38964 4.47011 4.51400 4.53757 4.56273 4.58926 4.60794 4.75060 4.76121 4.77075 4.84733 4.87164 4.90324 5.05743 5.15886 5.33150 5.33340 5.40381 5.54191 6.27830 6.30621 7.33401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.184 4.184 4 C -0.142 4.142 5 O -0.363 6.363 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.705 5.705 9 C 0.157 3.843 10 H 0.132 0.868 11 C -0.112 4.112 12 C -0.651 4.651 13 H 0.159 0.841 14 S 2.600 3.400 15 O -0.942 6.942 16 O -0.914 6.914 17 O -0.656 6.656 18 C 0.092 3.908 19 C -0.162 4.162 20 C 0.112 3.888 21 F -0.115 7.115 22 C -0.129 4.129 23 C -0.068 4.068 24 O -0.534 6.534 25 Si 0.683 3.317 26 C -0.060 4.060 27 C -0.090 4.090 28 C -0.126 4.126 29 H 0.061 0.939 30 H 0.087 0.913 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.087 0.913 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.082 0.918 38 H 0.410 0.590 39 H 0.105 0.895 40 H 0.102 0.898 41 H 0.157 0.843 42 H 0.128 0.872 43 H 0.382 0.618 44 H -0.228 1.228 45 H -0.256 1.256 46 H 0.161 0.839 47 H 0.152 0.848 48 H 0.112 0.888 49 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.417 -0.205 -0.546 1.532 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.241 4.241 4 C -0.199 4.199 5 O -0.278 6.278 6 C 0.406 3.594 7 O -0.454 6.454 8 N -0.363 5.363 9 C 0.052 3.948 10 H 0.149 0.851 11 C -0.152 4.152 12 C -0.758 4.758 13 H 0.177 0.823 14 S 2.695 3.305 15 O -0.940 6.940 16 O -0.912 6.912 17 O -0.615 6.615 18 C 0.050 3.950 19 C -0.182 4.182 20 C 0.092 3.908 21 F -0.093 7.093 22 C -0.131 4.131 23 C -0.178 4.178 24 O -0.340 6.340 25 Si 0.582 3.418 26 C -0.078 4.078 27 C -0.111 4.111 28 C -0.165 4.165 29 H 0.080 0.920 30 H 0.106 0.894 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.105 0.895 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.101 0.899 38 H 0.246 0.754 39 H 0.123 0.877 40 H 0.120 0.880 41 H 0.175 0.825 42 H 0.145 0.855 43 H 0.230 0.770 44 H -0.151 1.151 45 H -0.181 1.181 46 H 0.178 0.822 47 H 0.170 0.830 48 H 0.130 0.870 49 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.610 0.786 -0.587 1.886 hybrid contribution 0.667 0.224 0.780 1.050 sum -0.944 1.011 0.193 1.396 Atomic orbital electron populations 1.22526 0.93786 1.03080 1.04762 1.22144 0.94493 0.92246 0.81134 1.22525 1.01638 0.95208 1.04762 1.21883 1.02368 1.01249 0.94435 1.86319 1.71382 1.56392 1.13676 1.18132 0.78571 0.81387 0.81274 1.90919 1.40783 1.26639 1.87015 1.44742 1.55705 1.32946 1.02940 1.22409 0.94043 0.99810 0.78547 0.85072 1.23066 0.94180 1.04832 0.93072 1.32136 1.08249 1.22502 1.12878 0.82301 1.05463 0.73167 0.76434 0.75456 1.93677 1.59328 1.86432 1.54562 1.93675 1.84192 1.39642 1.73722 1.85749 1.63444 1.57694 1.54603 1.17654 1.04534 0.85224 0.87563 1.21209 1.03391 0.91840 1.01788 1.16986 0.99477 0.81428 0.92893 1.91619 1.84271 1.40211 1.93193 1.20682 1.00390 0.98090 0.93948 1.25070 1.12934 0.97234 0.82550 1.86532 1.57162 1.59363 1.30923 0.95205 0.80154 0.84898 0.81525 1.20852 0.95852 0.90318 1.00810 1.21466 0.97419 1.01566 0.90615 1.23348 1.00029 1.03351 0.89789 0.92040 0.89448 0.90885 0.90878 0.92085 0.89470 0.91325 0.91359 0.89891 0.75416 0.87654 0.88006 0.82547 0.85458 0.76999 1.15146 1.18104 0.82180 0.83013 0.86976 0.88369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.15 1.13 -90.62 -0.10 0.04 16 3 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 4 C -0.14 0.12 8.85 37.16 0.33 0.45 16 5 O -0.36 -0.76 9.94 -40.32 -0.40 -1.16 16 6 C 0.65 1.46 8.06 54.06 0.44 1.89 16 7 O -0.56 -2.42 11.48 -19.28 -0.22 -2.65 16 8 N -0.70 0.45 5.36 -57.93 -0.31 0.14 16 9 C 0.16 -0.27 4.24 -67.11 -0.28 -0.56 16 10 H 0.13 -0.16 7.46 -51.93 -0.39 -0.55 16 11 C -0.11 0.35 7.42 -25.92 -0.19 0.15 16 12 C -0.65 1.73 4.03 -25.92 -0.10 1.63 16 13 H 0.16 -0.73 6.13 -51.93 -0.32 -1.05 16 14 S 2.60 1.16 5.13 -107.50 -0.55 0.61 16 15 O -0.94 -2.38 16.26 -67.03 -1.09 -3.47 16 16 O -0.91 -3.07 17.27 -67.04 -1.16 -4.22 16 17 O -0.66 -0.21 10.05 -51.75 -0.52 -0.73 16 18 C 0.09 -0.03 4.79 -39.23 -0.19 -0.22 16 19 C -0.16 0.26 8.49 -39.37 -0.33 -0.07 16 20 C 0.11 -0.12 6.66 -39.44 -0.26 -0.38 16 21 F -0.11 0.00 12.83 2.25 0.03 0.03 16 22 C -0.13 0.23 5.13 -104.53 -0.54 -0.31 16 23 C -0.07 0.13 2.97 36.00 0.11 0.24 16 24 O -0.53 1.17 11.64 -35.23 -0.41 0.76 16 25 Si 0.68 -1.28 30.81 -169.99 -5.24 -6.52 16 26 C -0.06 0.14 9.23 -39.62 -0.37 -0.23 16 27 C -0.09 0.09 9.05 -39.42 -0.36 -0.27 16 28 C -0.13 0.28 7.44 -25.92 -0.19 0.09 16 29 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 31 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 0.26 5.88 -51.93 -0.31 -0.05 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.41 -1.04 8.84 -40.82 -0.36 -1.40 16 39 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 40 H 0.10 -0.41 8.08 -51.93 -0.42 -0.83 16 41 H 0.16 -0.62 7.28 -52.48 -0.38 -1.00 16 42 H 0.13 -0.20 7.96 -51.93 -0.41 -0.61 16 43 H 0.38 -2.44 8.43 45.56 0.38 -2.05 16 44 H -0.23 -0.11 5.27 56.52 0.30 0.19 16 45 H -0.26 -0.38 7.11 56.52 0.40 0.03 16 46 H 0.16 -0.68 7.08 -52.49 -0.37 -1.05 16 47 H 0.15 -0.31 8.06 -52.49 -0.42 -0.74 16 48 H 0.11 -0.21 7.43 -51.93 -0.39 -0.60 16 49 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 LS Contribution 409.16 15.07 6.17 6.17 Total: 0.00 -10.97 409.16 -11.93 -22.90 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -6.79 Total: -14.54 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: -1.43 Total: 2.70 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.31 Total: 0.14 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -3.80 Total: -11.48 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 0.03 Total: 0.03 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.24 Total: -6.52 kcal Atomic # 16 Polarization: 1.16 SS G_CDS: -0.55 Total: 0.61 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.97 -11.93 -22.90 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11680700_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.765 kcal (2) G-P(sol) polarization free energy of solvation -10.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.739 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.09 seconds