Wall clock time and date at job start Sat Mar 6 2021 00:16:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.45194 * 109.47339 * 239.99574 * 2 1 3 6 6 C 1.34639 * 116.99841 * 60.00459 * 5 2 1 7 7 O 1.21508 * 119.99991 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00005 * 179.97438 * 6 5 2 9 9 C 1.46505 * 119.99900 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.84899 * 23.80343 * 9 8 6 11 11 C 1.53782 * 113.61231 * 155.00465 * 9 8 6 12 12 C 1.53780 * 87.07914 * 139.98162 * 11 9 8 13 13 H 1.08996 * 113.61681 * 89.11464 * 12 11 9 14 14 S 1.81398 * 113.60883 * 220.01540 * 12 11 9 15 15 O 1.42101 * 110.54683 * 291.62195 * 14 12 11 16 16 O 1.42105 * 110.54514 * 68.37889 * 14 12 11 17 17 O 1.52202 * 104.44915 * 179.97438 * 14 12 11 18 18 C 1.35898 * 113.99989 * 75.00173 * 17 14 12 19 19 C 1.38672 * 120.04225 * 269.72408 * 18 17 14 20 20 C 1.38378 * 119.92154 * 179.76903 * 19 18 17 21 21 F 1.35099 * 120.00115 * 180.27469 * 20 19 18 22 22 C 1.38483 * 120.00544 * 0.48588 * 20 19 18 23 23 C 1.50694 * 119.95698 * 179.76996 * 22 20 19 24 24 O 1.42904 * 109.47032 * 195.02350 * 23 22 20 25 25 Si 1.86307 * 109.47268 * 315.01771 * 23 22 20 26 26 C 1.38250 * 120.08180 * 359.79145 * 22 20 19 27 27 C 1.38134 * 120.08027 * 359.95373 * 26 22 20 28 28 C 1.53773 * 87.08273 * 334.56420 * 12 11 9 29 29 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 31 31 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 32 32 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 35 35 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 36 36 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 37 37 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 38 38 H 0.97001 * 119.99769 * 0.02562 * 8 6 5 39 39 H 1.09000 * 113.60703 * 254.52583 * 11 9 8 40 40 H 1.08993 * 113.61370 * 25.42730 * 11 9 8 41 41 H 1.08004 * 120.03587 * 0.02562 * 19 18 17 42 42 H 1.08997 * 109.47382 * 75.01841 * 23 22 20 43 43 H 0.96697 * 114.00021 * 59.99760 * 24 23 22 44 44 H 1.48506 * 109.99584 * 58.68355 * 25 23 22 45 45 H 1.48497 * 109.99924 * 180.02562 * 25 23 22 46 46 H 1.08000 * 119.95868 * 179.97438 * 26 22 20 47 47 H 1.07999 * 119.99998 * 180.02562 * 27 26 22 48 48 H 1.09004 * 113.61844 * 270.88691 * 28 12 11 49 49 H 1.09004 * 113.61548 * 139.98502 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0140 -0.6845 -1.1854 6 6 1.6523 -0.1729 -2.3772 7 8 0.9510 0.8182 -2.4252 8 7 2.0682 -0.7601 -3.5168 9 6 1.6742 -0.2038 -4.8136 10 1 1.4211 0.8551 -4.7605 11 6 2.6477 -0.5482 -5.9531 12 6 1.4104 -0.7467 -6.8444 13 1 1.0840 0.1635 -7.3475 14 16 1.5439 -2.1651 -7.9673 15 8 2.5309 -1.9235 -8.9607 16 8 1.5230 -3.3836 -7.2364 17 8 0.2300 -2.1664 -8.7355 18 6 0.1449 -1.1997 -9.6868 19 6 -0.3763 0.0450 -9.3672 20 6 -0.4573 1.0290 -10.3367 21 9 -0.9598 2.2440 -10.0258 22 6 -0.0275 0.7672 -11.6269 23 6 -0.1210 1.8380 -12.6830 24 8 0.0419 1.2486 -13.9746 25 14 -1.7877 2.6646 -12.5836 26 6 0.4869 -0.4754 -11.9471 27 6 0.5742 -1.4586 -10.9808 28 6 0.6286 -1.0525 -5.5560 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 0.5139 0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8900 35 1 1.6767 -1.7488 1.2493 36 1 3.1300 -0.7207 1.2495 37 1 1.6766 -0.2073 2.1393 38 1 2.6277 -1.5516 -3.4784 39 1 3.2759 0.2886 -6.2584 40 1 3.2139 -1.4636 -5.7818 41 1 -0.7148 0.2473 -8.3618 42 1 0.6621 2.5785 -12.5201 43 1 -0.6220 0.5787 -14.1879 44 1 -1.9825 3.2541 -11.2345 45 1 -1.8927 3.7223 -13.6206 46 1 0.8212 -0.6776 -12.9540 47 1 0.9767 -2.4287 -11.2323 48 1 0.6428 -2.1060 -5.2762 49 1 -0.3732 -0.6231 -5.5407 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_40_11680700_14316444.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:16:15 Heat of formation + Delta-G solvation = -186.389648 kcal Electronic energy + Delta-G solvation = -37134.598177 eV Core-core repulsion = 31879.991409 eV Total energy + Delta-G solvation = -5254.606768 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.128 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.48706 -42.33184 -41.96187 -40.38029 -39.78249 -38.52909 -37.95698 -37.50349 -37.37617 -35.44528 -34.21747 -32.34210 -31.99240 -28.39065 -28.32815 -27.37787 -27.20876 -27.05112 -24.36742 -23.86735 -23.51746 -21.95174 -21.52456 -20.91819 -19.79495 -19.32957 -19.25926 -18.91050 -18.60873 -18.06720 -17.63684 -17.41665 -17.25417 -17.18973 -16.76978 -16.66002 -16.30787 -16.05611 -15.85434 -15.63936 -15.45214 -15.36352 -15.23687 -14.50331 -14.42028 -14.33103 -14.22097 -13.89399 -13.85798 -13.62318 -13.52182 -13.46813 -13.43799 -13.30226 -13.25556 -13.15876 -12.95211 -12.91218 -12.89452 -12.66108 -12.58089 -12.45340 -12.32358 -12.10225 -11.49570 -11.47105 -11.42407 -11.16418 -10.89876 -10.32066 -10.24209 -9.77501 -5.01304 -1.27210 -0.32987 -0.19100 0.78501 1.10596 1.23342 1.63965 1.65524 1.92300 2.16069 2.34880 2.55801 2.78968 2.88830 3.02044 3.12417 3.23563 3.27286 3.39647 3.50267 3.59299 3.64138 3.71311 3.77148 3.83050 3.91832 4.02053 4.17601 4.29390 4.32819 4.40173 4.50355 4.53778 4.59060 4.60159 4.62009 4.65900 4.72822 4.74460 4.75562 4.80321 4.85288 4.88106 4.96054 4.99490 5.09225 5.22755 5.24696 5.32971 5.47619 5.53227 6.29807 6.69819 7.25636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.180 4.180 4 C -0.139 4.139 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.589 6.589 8 N -0.695 5.695 9 C 0.152 3.848 10 H 0.128 0.872 11 C -0.113 4.113 12 C -0.629 4.629 13 H 0.182 0.818 14 S 2.603 3.397 15 O -0.967 6.967 16 O -0.951 6.951 17 O -0.660 6.660 18 C 0.073 3.927 19 C -0.158 4.158 20 C 0.101 3.899 21 F -0.122 7.122 22 C -0.126 4.126 23 C -0.064 4.064 24 O -0.545 6.545 25 Si 0.755 3.245 26 C -0.053 4.053 27 C -0.102 4.102 28 C -0.129 4.129 29 H 0.061 0.939 30 H 0.065 0.935 31 H 0.086 0.914 32 H 0.086 0.914 33 H 0.062 0.938 34 H 0.065 0.935 35 H 0.069 0.931 36 H 0.069 0.931 37 H 0.098 0.902 38 H 0.419 0.581 39 H 0.122 0.878 40 H 0.111 0.889 41 H 0.178 0.822 42 H 0.125 0.875 43 H 0.401 0.599 44 H -0.260 1.260 45 H -0.304 1.304 46 H 0.181 0.819 47 H 0.157 0.843 48 H 0.108 0.892 49 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.198 -0.212 -0.406 1.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.237 4.237 4 C -0.196 4.196 5 O -0.284 6.284 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.355 5.355 9 C 0.047 3.953 10 H 0.145 0.855 11 C -0.152 4.152 12 C -0.739 4.739 13 H 0.200 0.800 14 S 2.702 3.298 15 O -0.966 6.966 16 O -0.950 6.950 17 O -0.619 6.619 18 C 0.031 3.969 19 C -0.178 4.178 20 C 0.081 3.919 21 F -0.101 7.101 22 C -0.128 4.128 23 C -0.174 4.174 24 O -0.354 6.354 25 Si 0.659 3.341 26 C -0.071 4.071 27 C -0.122 4.122 28 C -0.169 4.169 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.105 0.895 32 H 0.105 0.895 33 H 0.081 0.919 34 H 0.084 0.916 35 H 0.088 0.912 36 H 0.088 0.912 37 H 0.117 0.883 38 H 0.256 0.744 39 H 0.140 0.860 40 H 0.130 0.870 41 H 0.195 0.805 42 H 0.142 0.858 43 H 0.252 0.748 44 H -0.186 1.186 45 H -0.232 1.232 46 H 0.198 0.802 47 H 0.175 0.825 48 H 0.127 0.873 49 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.382 0.700 -0.480 1.622 hybrid contribution 0.562 0.295 0.717 0.957 sum -0.820 0.995 0.236 1.311 Atomic orbital electron populations 1.22479 0.93955 1.02954 1.04374 1.22366 0.94520 0.92517 0.81528 1.22476 1.01648 0.95226 1.04360 1.21898 1.02468 1.01257 0.93946 1.86323 1.71482 1.56624 1.13987 1.18369 0.78545 0.81343 0.81778 1.90905 1.41971 1.27772 1.87354 1.44787 1.55177 1.32919 1.02569 1.22494 0.94884 0.99653 0.78273 0.85458 1.23217 0.94134 1.06028 0.91855 1.31982 1.08839 1.21388 1.11733 0.80009 1.05211 0.72686 0.76635 0.75276 1.93636 1.60312 1.86859 1.55753 1.93624 1.84729 1.42306 1.74299 1.85716 1.62981 1.58245 1.54981 1.17894 1.05636 0.85606 0.87749 1.21366 1.02626 0.91097 1.02754 1.17121 1.00061 0.81299 0.93377 1.91604 1.84495 1.40700 1.93284 1.20731 1.00086 0.98258 0.93704 1.24987 1.12349 0.97228 0.82842 1.86500 1.58264 1.60107 1.30485 0.94410 0.79233 0.83090 0.77333 1.21032 0.95072 0.89581 1.01401 1.21710 0.97436 1.02258 0.90808 1.23417 1.00651 1.03195 0.89608 0.91982 0.91562 0.89492 0.89504 0.91944 0.91592 0.91232 0.91189 0.88312 0.74375 0.85970 0.87050 0.80504 0.85816 0.74829 1.18612 1.23171 0.80210 0.82528 0.87344 0.87263 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.45 8.37 71.98 0.60 0.16 16 2 C 0.13 0.29 1.13 -10.79 -0.01 0.28 16 3 C -0.18 -0.42 8.37 71.98 0.60 0.19 16 4 C -0.14 0.32 8.85 71.98 0.64 0.96 16 5 O -0.37 -1.73 9.94 -55.48 -0.55 -2.28 16 6 C 0.65 3.32 8.06 129.79 1.05 4.37 16 7 O -0.59 -5.71 11.48 19.82 0.23 -5.48 16 8 N -0.70 0.76 5.36 -567.59 -3.04 -2.28 16 9 C 0.15 -0.57 4.24 45.52 0.19 -0.38 16 10 H 0.13 -0.33 7.46 -2.39 -0.02 -0.35 16 11 C -0.11 0.79 7.42 31.12 0.23 1.02 16 12 C -0.63 3.75 4.03 31.12 0.13 3.87 16 13 H 0.18 -1.94 6.13 -2.39 -0.01 -1.95 16 14 S 2.60 3.39 5.13 -56.49 -0.29 3.10 16 15 O -0.97 -5.36 16.26 -118.57 -1.93 -7.29 16 16 O -0.95 -7.43 17.27 -118.57 -2.05 -9.47 16 17 O -0.66 -0.65 10.05 -61.50 -0.62 -1.27 16 18 C 0.07 -0.06 4.79 22.50 0.11 0.05 16 19 C -0.16 0.61 8.49 22.41 0.19 0.80 16 20 C 0.10 -0.27 6.66 22.36 0.15 -0.12 16 21 F -0.12 0.00 12.83 44.97 0.58 0.58 16 22 C -0.13 0.53 5.13 -19.80 -0.10 0.43 16 23 C -0.06 0.28 2.97 71.23 0.21 0.49 16 24 O -0.55 2.98 11.64 -148.98 -1.73 1.25 16 25 Si 0.75 -2.56 30.81 68.60 2.11 -0.44 16 26 C -0.05 0.29 9.23 22.25 0.21 0.50 16 27 C -0.10 0.23 9.05 22.37 0.20 0.43 16 28 C -0.13 0.61 7.44 31.12 0.23 0.85 16 29 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.07 0.48 5.88 -2.39 -0.01 0.47 16 31 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 32 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 34 H 0.07 0.47 5.88 -2.39 -0.01 0.45 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 37 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 38 H 0.42 -2.10 8.84 -92.71 -0.82 -2.92 16 39 H 0.12 -1.21 8.14 -2.39 -0.02 -1.23 16 40 H 0.11 -0.96 8.08 -2.39 -0.02 -0.98 16 41 H 0.18 -1.60 7.28 -2.91 -0.02 -1.62 16 42 H 0.12 -0.42 7.96 -2.39 -0.02 -0.44 16 43 H 0.40 -5.71 8.43 -74.06 -0.62 -6.33 16 44 H -0.26 -0.46 5.27 99.48 0.52 0.07 16 45 H -0.30 -1.36 7.11 99.48 0.71 -0.66 16 46 H 0.18 -1.80 7.08 -2.91 -0.02 -1.82 16 47 H 0.16 -0.61 8.06 -2.91 -0.02 -0.63 16 48 H 0.11 -0.38 7.43 -2.38 -0.02 -0.40 16 49 H 0.11 -0.74 8.14 -2.38 -0.02 -0.76 16 Total: 0.00 -26.53 409.16 -3.24 -29.77 By element: Atomic # 1 Polarization: -19.48 SS G_CDS: -0.57 Total: -20.05 kcal Atomic # 6 Polarization: 9.26 SS G_CDS: 4.62 Total: 13.88 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -3.04 Total: -2.28 kcal Atomic # 8 Polarization: -17.89 SS G_CDS: -6.65 Total: -24.54 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 0.58 Total: 0.58 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: 2.11 Total: -0.44 kcal Atomic # 16 Polarization: 3.39 SS G_CDS: -0.29 Total: 3.10 kcal Total: -26.53 -3.24 -29.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11680700_14316444.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.621 kcal (2) G-P(sol) polarization free energy of solvation -26.527 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.241 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds