Wall clock time and date at job start Sat Mar 6 2021 00:23:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21285 * 120.00051 * 2 1 4 4 C 1.50703 * 120.00459 * 179.97438 * 2 1 3 5 5 H 1.09000 * 112.84604 * 48.80743 * 4 2 1 6 6 C 1.53784 * 113.61518 * 179.97438 * 4 2 1 7 7 C 1.53777 * 87.07852 * 139.98356 * 6 4 2 8 8 H 1.08995 * 113.61695 * 89.19945 * 7 6 4 9 9 N 1.46503 * 113.61548 * 220.02042 * 7 6 4 10 10 S 1.65601 * 120.00290 * 213.47172 * 9 7 6 11 11 O 1.42094 * 106.39900 * 311.45806 * 10 9 7 12 12 O 1.42100 * 106.40163 * 178.53849 * 10 9 7 13 13 C 1.76195 * 107.21558 * 64.99966 * 10 9 7 14 14 C 1.38228 * 120.00180 * 90.00524 * 13 10 9 15 15 C 1.38241 * 120.00172 * 179.97438 * 14 13 10 16 16 C 1.38230 * 119.99985 * 359.97438 * 15 14 13 17 17 C 1.50699 * 120.00144 * 179.97438 * 16 15 14 18 18 O 1.42896 * 109.47261 * 65.00061 * 17 16 15 19 19 Si 1.86300 * 109.47060 * 185.00255 * 17 16 15 20 20 C 1.38244 * 119.99836 * 0.25473 * 16 15 14 21 21 C 1.38230 * 119.99979 * 359.47181 * 20 16 15 22 22 C 1.53781 * 87.17667 * 334.60851 * 7 6 4 23 23 H 0.97007 * 119.99324 * 180.02562 * 1 2 3 24 24 H 0.96989 * 120.00462 * 0.02562 * 1 2 3 25 25 H 1.09007 * 113.61143 * 25.44098 * 6 4 2 26 26 H 1.09000 * 113.69372 * 254.54320 * 6 4 2 27 27 H 0.97008 * 120.00058 * 33.47365 * 9 7 6 28 28 H 1.08004 * 119.99980 * 359.97041 * 14 13 10 29 29 H 1.08003 * 119.99813 * 179.97438 * 15 14 13 30 30 H 1.08997 * 109.47119 * 304.99914 * 17 16 15 31 31 H 0.96693 * 114.00306 * 179.97438 * 18 17 16 32 32 H 1.48506 * 110.00048 * 178.68391 * 19 17 16 33 33 H 1.48502 * 109.99996 * 299.99717 * 19 17 16 34 34 H 1.07999 * 119.99527 * 179.72270 * 20 16 15 35 35 H 1.07996 * 120.00183 * 180.27285 * 21 20 16 36 36 H 1.09005 * 113.61554 * 139.93569 * 22 7 6 37 37 H 1.08999 * 113.62144 * 270.84632 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7401 -2.0027 -0.7550 6 6 3.6296 -1.1339 -0.0001 7 6 3.6830 -2.3109 0.9882 8 1 3.7554 -3.2847 0.5040 9 7 4.6666 -2.1336 2.0593 10 16 5.4670 -3.4465 2.6742 11 8 4.4762 -4.4266 2.9516 12 8 6.3622 -2.9462 3.6579 13 6 6.4662 -4.1017 1.3793 14 6 7.7614 -3.6497 1.2097 15 6 8.5455 -4.1641 0.1940 16 6 8.0345 -5.1309 -0.6516 17 6 8.8891 -5.6913 -1.7592 18 8 9.9927 -6.4030 -1.1957 19 14 7.8707 -6.8501 -2.8035 20 6 6.7376 -5.5794 -0.4849 21 6 5.9554 -5.0692 0.5342 22 6 2.2503 -1.9321 1.3987 23 1 -0.4849 -0.8402 0.0004 24 1 -0.4850 0.8399 -0.0004 25 1 3.9633 -0.1887 0.4282 26 1 4.0942 -1.3502 -0.9622 27 1 4.8491 -1.2471 2.4085 28 1 8.1608 -2.8946 1.8706 29 1 9.5574 -3.8107 0.0612 30 1 9.2612 -4.8756 -2.3791 31 1 10.5863 -6.7921 -1.8523 32 1 8.6934 -7.3851 -3.9182 33 1 7.3575 -7.9668 -1.9699 34 1 6.3369 -6.3315 -1.1484 35 1 4.9437 -5.4228 0.6672 36 1 1.6015 -2.7924 1.5638 37 1 2.2060 -1.2055 2.2100 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11684970_13421422.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:23:32 Heat of formation + Delta-G solvation = -85.303853 kcal Electronic energy + Delta-G solvation = -23858.264180 eV Core-core repulsion = 20116.046127 eV Total energy + Delta-G solvation = -3742.218053 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.086 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -41.38331 -40.67691 -38.95959 -38.17523 -37.91109 -36.83610 -34.71785 -34.06024 -33.20971 -32.25372 -27.31340 -27.02241 -26.86109 -24.15189 -22.87836 -22.42231 -21.05224 -20.39023 -19.29984 -18.75089 -18.56260 -18.37187 -17.93745 -17.21712 -17.01632 -16.68241 -16.45343 -15.89016 -15.78813 -15.45066 -15.39148 -14.71952 -14.59302 -14.39632 -14.08403 -14.03903 -13.92978 -13.62249 -13.54420 -13.08610 -13.03343 -12.85892 -12.47772 -12.34469 -12.11801 -12.05852 -11.91570 -11.75764 -10.90235 -10.75201 -10.71381 -10.59034 -10.38767 -10.17299 -5.13889 -0.71007 -0.36623 0.15720 1.07061 1.44190 1.57926 1.79658 1.85575 2.27699 2.52548 2.72756 3.09141 3.21397 3.28184 3.31204 3.54689 3.57336 3.61217 3.68506 3.74177 3.87909 4.07866 4.13207 4.15948 4.31273 4.50239 4.53781 4.55030 4.64244 4.75773 4.77676 4.85635 4.90136 4.94760 5.22042 5.26266 5.64704 5.75098 5.82449 6.23671 6.29451 7.24155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.528 3.472 3 O -0.541 6.541 4 C -0.142 4.142 5 H 0.121 0.879 6 C -0.122 4.122 7 C 0.129 3.871 8 H 0.118 0.882 9 N -1.102 6.102 10 S 2.692 3.308 11 O -0.951 6.951 12 O -0.955 6.955 13 C -0.675 4.675 14 C -0.015 4.015 15 C -0.112 4.112 16 C -0.016 4.016 17 C -0.087 4.087 18 O -0.533 6.533 19 Si 0.686 3.314 20 C -0.136 4.136 21 C -0.018 4.018 22 C -0.134 4.134 23 H 0.403 0.597 24 H 0.402 0.598 25 H 0.105 0.895 26 H 0.084 0.916 27 H 0.423 0.577 28 H 0.144 0.856 29 H 0.136 0.864 30 H 0.083 0.917 31 H 0.384 0.616 32 H -0.258 1.258 33 H -0.252 1.252 34 H 0.138 0.862 35 H 0.146 0.854 36 H 0.089 0.911 37 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.562 -0.492 -6.497 7.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.417 5.417 2 C 0.312 3.688 3 O -0.418 6.418 4 C -0.164 4.164 5 H 0.139 0.861 6 C -0.162 4.162 7 C 0.021 3.979 8 H 0.136 0.864 9 N -0.861 5.861 10 S 2.782 3.218 11 O -0.941 6.941 12 O -0.945 6.945 13 C -0.761 4.761 14 C -0.035 4.035 15 C -0.131 4.131 16 C -0.016 4.016 17 C -0.196 4.196 18 O -0.341 6.341 19 Si 0.586 3.414 20 C -0.155 4.155 21 C -0.037 4.037 22 C -0.174 4.174 23 H 0.231 0.769 24 H 0.233 0.767 25 H 0.123 0.877 26 H 0.102 0.898 27 H 0.258 0.742 28 H 0.162 0.838 29 H 0.154 0.846 30 H 0.101 0.899 31 H 0.232 0.768 32 H -0.183 1.183 33 H -0.177 1.177 34 H 0.155 0.845 35 H 0.163 0.837 36 H 0.108 0.892 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -3.452 -1.064 -5.460 6.547 hybrid contribution 1.147 -0.083 -0.581 1.289 sum -2.304 -1.147 -6.041 6.566 Atomic orbital electron populations 1.43904 1.07301 1.12713 1.77830 1.20380 0.82591 0.91026 0.74753 1.90771 1.68246 1.33508 1.49228 1.22658 0.97298 0.95814 1.00638 0.86102 1.23302 0.93051 0.99511 1.00305 1.22266 0.87648 1.00093 0.87902 0.86439 1.55556 1.53881 1.25041 1.51578 1.02013 0.73402 0.73128 0.73289 1.93614 1.58528 1.59395 1.82539 1.93622 1.65291 1.79755 1.55830 1.30998 1.10479 1.12628 1.22035 1.20984 0.91295 0.96117 0.95060 1.21176 1.00319 0.96803 0.94814 1.19613 0.93364 0.93987 0.94666 1.24943 0.93535 1.01979 0.99148 1.86587 1.38214 1.72468 1.36812 0.95050 0.85576 0.81761 0.78991 1.21131 0.94146 1.00995 0.99193 1.20879 0.99882 0.91765 0.91202 1.23471 0.97096 1.01527 0.95306 0.76873 0.76709 0.87671 0.89753 0.74166 0.83816 0.84645 0.89891 0.76779 1.18265 1.17657 0.84517 0.83652 0.89243 0.88632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.82 8.87 31.22 0.28 3.10 16 2 C 0.53 -0.16 7.63 -10.99 -0.08 -0.25 16 3 O -0.54 -2.41 16.74 5.55 0.09 -2.32 16 4 C -0.14 0.46 4.15 -90.86 -0.38 0.08 16 5 H 0.12 -0.70 8.14 -51.93 -0.42 -1.12 16 6 C -0.12 0.33 7.19 -25.92 -0.19 0.14 16 7 C 0.13 -0.40 4.34 -67.12 -0.29 -0.69 16 8 H 0.12 -0.57 7.76 -51.93 -0.40 -0.98 16 9 N -1.10 2.18 5.79 -4.20 -0.02 2.15 16 10 S 2.69 2.51 5.68 -107.50 -0.61 1.90 16 11 O -0.95 -3.22 17.04 -57.17 -0.97 -4.19 16 12 O -0.95 -3.97 17.28 -57.17 -0.99 -4.96 16 13 C -0.67 -0.27 5.95 -39.58 -0.24 -0.50 16 14 C -0.02 -0.01 9.52 -39.58 -0.38 -0.38 16 15 C -0.11 -0.05 9.69 -39.58 -0.38 -0.43 16 16 C -0.02 0.00 5.38 -104.62 -0.56 -0.57 16 17 C -0.09 0.11 2.79 36.01 0.10 0.21 16 18 O -0.53 -0.14 12.81 -35.23 -0.45 -0.60 16 19 Si 0.69 -1.47 29.84 -169.99 -5.07 -6.54 16 20 C -0.14 0.08 8.67 -39.58 -0.34 -0.27 16 21 C -0.02 0.01 9.23 -39.58 -0.37 -0.36 16 22 C -0.13 0.42 7.44 -25.83 -0.19 0.23 16 23 H 0.40 -2.49 8.83 -40.82 -0.36 -2.86 16 24 H 0.40 -1.37 8.93 -40.82 -0.36 -1.74 16 25 H 0.10 -0.10 7.43 -51.92 -0.39 -0.49 16 26 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 27 H 0.42 -1.31 8.94 -34.47 -0.31 -1.62 16 28 H 0.14 -0.09 7.62 -52.48 -0.40 -0.49 16 29 H 0.14 -0.10 8.06 -52.48 -0.42 -0.52 16 30 H 0.08 -0.26 7.96 -51.93 -0.41 -0.68 16 31 H 0.38 -1.43 8.74 45.56 0.40 -1.04 16 32 H -0.26 0.01 7.11 56.52 0.40 0.41 16 33 H -0.25 -0.26 7.05 56.52 0.40 0.14 16 34 H 0.14 -0.36 4.87 -52.49 -0.26 -0.61 16 35 H 0.15 -0.37 7.62 -52.49 -0.40 -0.77 16 36 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 37 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 LS Contribution 329.48 15.07 4.97 4.97 Total: 0.00 -13.49 329.48 -10.29 -23.78 By element: Atomic # 1 Polarization: -10.31 SS G_CDS: -4.20 Total: -14.51 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -3.30 Total: -2.78 kcal Atomic # 7 Polarization: 5.00 SS G_CDS: 0.25 Total: 5.25 kcal Atomic # 8 Polarization: -9.74 SS G_CDS: -2.32 Total: -12.07 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.07 Total: -6.54 kcal Atomic # 16 Polarization: 2.51 SS G_CDS: -0.61 Total: 1.90 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -13.49 -10.29 -23.78 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11684970_13421422.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.523 kcal (2) G-P(sol) polarization free energy of solvation -13.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds