Wall clock time and date at job start Sat Mar 6 2021 00:23:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 120.00463 * 2 1 4 4 C 1.50700 * 119.99675 * 179.72123 * 2 1 3 5 5 H 1.09002 * 112.84997 * 309.94285 * 4 2 1 6 6 C 1.53780 * 113.61807 * 81.14178 * 4 2 1 7 7 C 1.53956 * 87.02124 * 139.94964 * 6 4 2 8 8 H 1.09004 * 113.53217 * 89.19032 * 7 6 4 9 9 N 1.46496 * 113.74172 * 220.05622 * 7 6 4 10 10 S 1.65598 * 120.00069 * 242.59794 * 9 7 6 11 11 O 1.42095 * 106.40553 * 178.53992 * 10 9 7 12 12 O 1.42099 * 106.40233 * 311.46430 * 10 9 7 13 13 C 1.76208 * 107.21841 * 65.00154 * 10 9 7 14 14 C 1.33384 * 125.20162 * 90.00094 * 13 10 9 15 15 C 1.50705 * 122.54160 * 359.95486 * 14 13 10 16 16 O 1.42902 * 109.47078 * 285.00304 * 15 14 13 17 17 Si 1.86302 * 109.47163 * 165.00142 * 15 14 13 18 18 C 1.38424 * 114.92158 * 179.97438 * 14 13 10 19 19 C 1.33388 * 114.91892 * 359.97438 * 18 14 13 20 20 S 1.75875 * 125.20302 * 269.69614 * 13 10 9 21 21 C 1.53782 * 113.61302 * 178.75115 * 4 2 1 22 22 H 0.97004 * 119.99652 * 0.02562 * 1 2 3 23 23 H 0.97000 * 119.99894 * 179.97438 * 1 2 3 24 24 H 1.08996 * 113.61476 * 254.53578 * 6 4 2 25 25 H 1.09008 * 113.61192 * 25.43231 * 6 4 2 26 26 H 0.97002 * 120.00450 * 62.60170 * 9 7 6 27 27 H 1.09000 * 109.46675 * 45.00400 * 15 14 13 28 28 H 0.96699 * 113.99703 * 299.99555 * 16 15 14 29 29 H 1.48498 * 110.00000 * 180.02562 * 17 15 14 30 30 H 1.48499 * 110.00121 * 301.32187 * 17 15 14 31 31 H 1.08000 * 122.54333 * 180.02562 * 18 14 13 32 32 H 1.08001 * 125.20180 * 180.02562 * 19 18 14 33 33 H 1.08995 * 113.61641 * 334.56108 * 21 4 2 34 34 H 1.09003 * 113.61810 * 105.38826 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1012 -1.3051 0.0064 5 1 1.7543 -1.9904 0.7798 6 6 2.2213 -1.9539 -1.3827 7 6 3.6636 -2.3275 -0.9949 8 1 3.7439 -3.2935 -0.4961 9 7 4.6278 -2.1690 -2.0864 10 16 5.4436 -3.4873 -2.6686 11 8 6.2639 -3.0156 -3.7286 12 8 5.9565 -4.1743 -1.5354 13 6 4.2505 -4.5573 -3.4011 14 6 3.8639 -4.5190 -4.6771 15 6 4.4212 -3.5251 -5.6635 16 8 3.8547 -2.2372 -5.4136 17 14 3.9973 -4.0647 -7.3955 18 6 2.9118 -5.4610 -5.0267 19 6 2.5256 -6.2646 -4.0346 20 16 3.3929 -5.8442 -2.5634 21 6 3.6292 -1.1345 -0.0252 22 1 -0.4850 0.8401 -0.0004 23 1 -0.4850 -0.8401 -0.0004 24 1 1.5680 -2.8155 -1.5201 25 1 2.1611 -1.2404 -2.2046 26 1 4.7884 -1.2919 -2.4682 27 1 5.5044 -3.4731 -5.5540 28 1 2.8914 -2.2091 -5.4936 29 1 4.5418 -3.0932 -8.3777 30 1 4.5537 -5.4165 -7.6569 31 1 2.5125 -5.5399 -6.0270 32 1 1.7950 -7.0552 -4.1223 33 1 3.9546 -0.1966 -0.4752 34 1 4.1108 -1.3342 0.9321 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_40_11684970_13652106.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 00:23:36 Heat of formation + Delta-G solvation = -74.971101 kcal Electronic energy + Delta-G solvation = -23390.203922 eV Core-core repulsion = 19737.586177 eV Total energy + Delta-G solvation = -3652.617745 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.043 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -41.37382 -40.15345 -38.94232 -38.11237 -37.11001 -36.85784 -34.71631 -34.01683 -31.50836 -28.00192 -27.00042 -26.85983 -24.38151 -22.43078 -21.65105 -20.74655 -20.13072 -19.51942 -18.69089 -18.38036 -18.29776 -17.90003 -16.82591 -16.64048 -16.48837 -16.29406 -15.94518 -15.69643 -15.41533 -15.18538 -14.60441 -14.30608 -14.03931 -13.97904 -13.85204 -13.61090 -13.53376 -13.11212 -13.07229 -12.75735 -12.52456 -12.31702 -12.14669 -12.05325 -11.94734 -11.70940 -10.90463 -10.71739 -10.63874 -10.53516 -10.45975 -9.73506 -5.12541 -0.85373 -0.56383 0.22924 0.56872 1.12408 1.19230 1.58358 1.59733 1.94059 1.95420 2.51204 2.66849 3.24015 3.29340 3.38469 3.42619 3.47484 3.55669 3.65682 3.89125 3.91058 4.05144 4.16034 4.44968 4.48986 4.54695 4.61594 4.65050 4.71871 4.82975 4.91663 4.98344 5.28778 5.74745 5.90528 6.28894 6.43863 7.24380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.528 3.472 3 O -0.539 6.539 4 C -0.141 4.141 5 H 0.121 0.879 6 C -0.136 4.136 7 C 0.124 3.876 8 H 0.119 0.881 9 N -1.092 6.092 10 S 2.716 3.284 11 O -0.944 6.944 12 O -0.952 6.952 13 C -0.776 4.776 14 C 0.010 3.990 15 C -0.091 4.091 16 O -0.525 6.525 17 Si 0.691 3.309 18 C -0.162 4.162 19 C -0.164 4.164 20 S 0.223 5.777 21 C -0.119 4.119 22 H 0.402 0.598 23 H 0.402 0.598 24 H 0.084 0.916 25 H 0.098 0.902 26 H 0.426 0.574 27 H 0.152 0.848 28 H 0.376 0.624 29 H -0.248 1.248 30 H -0.254 1.254 31 H 0.157 0.843 32 H 0.179 0.821 33 H 0.106 0.894 34 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.848 -3.770 -0.363 10.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.313 3.687 3 O -0.415 6.415 4 C -0.163 4.163 5 H 0.139 0.861 6 C -0.176 4.176 7 C 0.016 3.984 8 H 0.137 0.863 9 N -0.851 5.851 10 S 2.802 3.198 11 O -0.934 6.934 12 O -0.942 6.942 13 C -0.977 4.977 14 C -0.009 4.009 15 C -0.203 4.203 16 O -0.329 6.329 17 Si 0.591 3.409 18 C -0.192 4.192 19 C -0.301 4.301 20 S 0.490 5.510 21 C -0.159 4.159 22 H 0.233 0.767 23 H 0.230 0.770 24 H 0.102 0.898 25 H 0.116 0.884 26 H 0.262 0.738 27 H 0.169 0.831 28 H 0.222 0.778 29 H -0.172 1.172 30 H -0.179 1.179 31 H 0.174 0.826 32 H 0.196 0.804 33 H 0.124 0.876 34 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -7.479 -4.233 0.584 8.613 hybrid contribution -0.927 0.367 -1.299 1.637 sum -8.405 -3.866 -0.715 9.279 Atomic orbital electron populations 1.43900 1.07279 1.12647 1.77978 1.20370 0.82564 0.91013 0.74797 1.90778 1.68212 1.33485 1.49024 1.22614 0.97430 0.95760 1.00525 0.86143 1.23506 0.97064 1.01252 0.95730 1.22350 0.87644 1.00638 0.87744 0.86328 1.55383 1.58419 1.24437 1.46869 1.01346 0.72508 0.72683 0.73266 1.93563 1.64036 1.79776 1.56006 1.93628 1.75954 1.74149 1.50499 1.35772 1.29616 1.22879 1.09462 1.19212 0.93288 0.95597 0.92756 1.25562 1.03219 0.84650 1.06882 1.86615 1.25718 1.26920 1.93684 0.95285 0.90987 0.80026 0.74590 1.20258 1.00224 0.97539 1.01168 1.26233 1.03459 1.03546 0.96903 1.84318 1.31771 1.24831 1.10071 1.23250 0.92955 0.99169 1.00487 0.76713 0.76963 0.89774 0.88373 0.73770 0.83133 0.77766 1.17234 1.17870 0.82610 0.80364 0.87608 0.89621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 31. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.99 8.87 31.22 0.28 3.26 16 2 C 0.53 -0.11 7.63 -10.98 -0.08 -0.19 16 3 O -0.54 -2.56 16.75 5.55 0.09 -2.46 16 4 C -0.14 0.40 4.14 -90.96 -0.38 0.03 16 5 H 0.12 -0.62 8.14 -51.93 -0.42 -1.04 16 6 C -0.14 0.51 7.45 -25.83 -0.19 0.32 16 7 C 0.12 -0.25 4.42 -67.03 -0.30 -0.55 16 8 H 0.12 -0.32 7.77 -51.93 -0.40 -0.73 16 9 N -1.09 0.65 5.79 -4.12 -0.02 0.63 16 10 S 2.72 6.31 5.72 -107.50 -0.62 5.69 16 11 O -0.94 -4.69 14.92 -57.17 -0.85 -5.54 16 12 O -0.95 -4.73 17.43 -57.17 -1.00 -5.73 16 13 C -0.78 -0.39 6.54 29.04 0.19 -0.20 16 14 C 0.01 0.00 5.13 -106.25 -0.55 -0.55 16 15 C -0.09 -0.02 1.97 36.01 0.07 0.05 16 16 O -0.52 0.43 12.88 -35.23 -0.45 -0.02 16 17 Si 0.69 -0.88 30.25 -169.99 -5.14 -6.02 16 18 C -0.16 0.41 8.74 -41.21 -0.36 0.05 16 19 C -0.16 0.50 11.23 29.04 0.33 0.83 16 20 S 0.22 -0.29 23.21 -107.50 -2.50 -2.78 16 21 C -0.12 0.15 7.18 -25.92 -0.19 -0.04 16 22 H 0.40 -1.44 8.93 -40.82 -0.36 -1.80 16 23 H 0.40 -2.62 8.83 -40.82 -0.36 -2.98 16 24 H 0.08 -0.46 8.14 -51.93 -0.42 -0.89 16 25 H 0.10 -0.31 8.09 -51.92 -0.42 -0.73 16 26 H 0.43 -0.59 8.94 -34.46 -0.31 -0.90 16 27 H 0.15 0.41 5.65 -51.93 -0.29 0.12 16 28 H 0.38 -2.00 8.70 45.56 0.40 -1.60 16 29 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 30 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 31 H 0.16 -0.79 5.73 -52.49 -0.30 -1.09 16 32 H 0.18 -1.03 8.06 -52.49 -0.42 -1.46 16 33 H 0.11 0.03 7.45 -51.93 -0.39 -0.36 16 34 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 317.05 15.07 4.78 4.78 Total: 0.00 -12.29 317.05 -10.22 -22.50 By element: Atomic # 1 Polarization: -10.72 SS G_CDS: -3.33 Total: -14.05 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -1.45 Total: -0.26 kcal Atomic # 7 Polarization: 3.64 SS G_CDS: 0.25 Total: 3.89 kcal Atomic # 8 Polarization: -11.55 SS G_CDS: -2.21 Total: -13.76 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.14 Total: -6.02 kcal Atomic # 16 Polarization: 6.02 SS G_CDS: -3.11 Total: 2.91 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -12.29 -10.22 -22.50 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_40_11684970_13652106.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.469 kcal (2) G-P(sol) polarization free energy of solvation -12.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds